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Items: 17

1.

The International Conference on Intelligent Biology and Medicine (ICIBM) 2019: bioinformatics methods and applications for human diseases.

Zhao Z, Dai Y, Zhang C, Mathé E, Wei L, Wang K.

BMC Bioinformatics. 2019 Dec 20;20(Suppl 24):676. doi: 10.1186/s12859-019-3240-4.

2.

TSEA-DB: a trait-tissue association map for human complex traits and diseases.

Jia P, Dai Y, Hu R, Pei G, Manuel AM, Zhao Z.

Nucleic Acids Res. 2020 Jan 8;48(D1):D1022-D1030. doi: 10.1093/nar/gkz957.

PMID:
31680168
3.
4.

A Convergent Study of Genetic Variants Associated With Crohn's Disease: Evidence From GWAS, Gene Expression, Methylation, eQTL and TWAS.

Dai Y, Pei G, Zhao Z, Jia P.

Front Genet. 2019 Apr 9;10:318. doi: 10.3389/fgene.2019.00318. eCollection 2019.

5.

deTS: tissue-specific enrichment analysis to decode tissue specificity.

Pei G, Dai Y, Zhao Z, Jia P.

Bioinformatics. 2019 Oct 1;35(19):3842-3845. doi: 10.1093/bioinformatics/btz138.

PMID:
30824912
6.

Gene2vec: distributed representation of genes based on co-expression.

Du J, Jia P, Dai Y, Tao C, Zhao Z, Zhi D.

BMC Genomics. 2019 Feb 4;20(Suppl 1):82. doi: 10.1186/s12864-018-5370-x.

7.

Investigation of multi-trait associations using pathway-based analysis of GWAS summary statistics.

Pei G, Sun H, Dai Y, Liu X, Zhao Z, Jia P.

BMC Genomics. 2019 Feb 4;20(Suppl 1):79. doi: 10.1186/s12864-018-5373-7.

8.

Multiple transcription factors contribute to inter-chromosomal interaction in yeast.

Dai Y, Li C, Pei G, Dong X, Ding G, Zhao Z, Li Y, Jia P.

BMC Syst Biol. 2018 Dec 21;12(Suppl 8):140. doi: 10.1186/s12918-018-0643-1.

9.

ANCO-GeneDB: annotations and comprehensive analysis of candidate genes for alcohol, nicotine, cocaine and opioid dependence.

Hu R, Dai Y, Jia P, Zhao Z.

Database (Oxford). 2018 Jan 1;2018. doi: 10.1093/database/bay121.

10.

Mechanism of antidiabetic and synergistic effects of ginseng polysaccharide and ginsenoside Rb1 on diabetic rat model.

Li J, Li R, Li N, Zheng F, Dai Y, Ge Y, Yue H, Yu S.

J Pharm Biomed Anal. 2018 Sep 5;158:451-460. doi: 10.1016/j.jpba.2018.06.024. Epub 2018 Jun 18.

PMID:
30032757
11.

Low-Grade Dysplastic Nodules Revealed as the Tipping Point during Multistep Hepatocarcinogenesis by Dynamic Network Biomarkers.

Lu L, Jiang Z, Dai Y, Chen L.

Genes (Basel). 2017 Oct 13;8(10). pii: E268. doi: 10.3390/genes8100268. Erratum in: Genes (Basel). 2019 May 02;10(5):.

12.

Genome sequencing of strain Cellulosimicrobium sp. TH-20 with ginseng biotransformation ability.

Zheng F, Zhang W, Chu X, Dai Y, Li J, Zhao H, Wen L, Yue H, Yu S.

3 Biotech. 2017 Aug;7(4):237. doi: 10.1007/s13205-017-0850-2. Epub 2017 Jul 11. Review.

13.

Microbial transformation of ginsenoside Rb1, Re and Rg1 and its contribution to the improved anti-inflammatory activity of ginseng.

Yu S, Zhou X, Li F, Xu C, Zheng F, Li J, Zhao H, Dai Y, Liu S, Feng Y.

Sci Rep. 2017 Mar 10;7(1):138. doi: 10.1038/s41598-017-00262-0.

14.

Improvements and impacts of GRCh38 human reference on high throughput sequencing data analysis.

Guo Y, Dai Y, Yu H, Zhao S, Samuels DC, Shyr Y.

Genomics. 2017 Mar;109(2):83-90. doi: 10.1016/j.ygeno.2017.01.005. Epub 2017 Jan 26.

15.

Hyperlipidemia-associated gene variations and expression patterns revealed by whole-genome and transcriptome sequencing of rabbit models.

Wang Z, Zhang J, Li H, Li J, Niimi M, Ding G, Chen H, Xu J, Zhang H, Xu Z, Dai Y, Gui T, Li S, Liu Z, Wu S, Cao M, Zhou L, Lu X, Wang J, Yang J, Fu Y, Yang D, Song J, Zhu T, Li S, Ning B, Wang Z, Koike T, Shiomi M, Liu E, Chen L, Fan J, Chen YE, Li Y.

Sci Rep. 2016 Jun 1;6:26942. doi: 10.1038/srep26942.

16.

Microbial conversion of ginsenoside Rd from Rb1 by the fungus mutant Aspergillus niger strain TH-10a.

Feng L, Xu C, Li Z, Li J, Dai Y, Han H, Yu S, Liu S.

Prep Biochem Biotechnol. 2016 May 18;46(4):336-41. doi: 10.1080/10826068.2015.1031391.

PMID:
25831478
17.

The de novo sequence origin of two long non-coding genes from an inter-genic region.

Dai Y, Li S, Dong X, Sun H, Li C, Liu Z, Ying B, Ding G, Li Y.

BMC Genomics. 2013;14 Suppl 8:S6. doi: 10.1186/1471-2164-14-S8-S6. Epub 2013 Dec 9.

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