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Items: 19

1.

High-Throughput Identification and Analysis of Novel Conotoxins from Three Vermivorous Cone Snails by Transcriptome Sequencing.

Yao G, Peng C, Zhu Y, Fan C, Jiang H, Chen J, Cao Y, Shi Q.

Mar Drugs. 2019 Mar 26;17(3). pii: E193. doi: 10.3390/md17030193.

2.

High Throughput Identification of Novel Conotoxins from the Vermivorous Oak Cone Snail (Conus quercinus) by Transcriptome Sequencing.

Gao B, Peng C, Zhu Y, Sun Y, Zhao T, Huang Y, Shi Q.

Int J Mol Sci. 2018 Dec 5;19(12). pii: E3901. doi: 10.3390/ijms19123901.

3.

Cortex Mori Radicis extract attenuates myocardial damages in diabetic rats by regulating ERS.

Lian J, Chen J, Yuan Y, Chen J, Daud M Sayed M, Luo L, Zhu Y, Li S, Bu S.

Biomed Pharmacother. 2017 Jun;90:777-785. doi: 10.1016/j.biopha.2017.03.097. Epub 2017 Apr 17.

PMID:
28427040
4.

High-throughput identification of novel conotoxins from the Chinese tubular cone snail (Conus betulinus) by multi-transcriptome sequencing.

Peng C, Yao G, Gao BM, Fan CX, Bian C, Wang J, Cao Y, Wen B, Zhu Y, Ruan Z, Zhao X, You X, Bai J, Li J, Lin Z, Zou S, Zhang X, Qiu Y, Chen J, Coon SL, Yang J, Chen JS, Shi Q.

Gigascience. 2016 Apr 14;5:17. doi: 10.1186/s13742-016-0122-9. eCollection 2016.

5.

Outbred genome sequencing and CRISPR/Cas9 gene editing in butterflies.

Li X, Fan D, Zhang W, Liu G, Zhang L, Zhao L, Fang X, Chen L, Dong Y, Chen Y, Ding Y, Zhao R, Feng M, Zhu Y, Feng Y, Jiang X, Zhu D, Xiang H, Feng X, Li S, Wang J, Zhang G, Kronforst MR, Wang W.

Nat Commun. 2015 Sep 10;6:8212. doi: 10.1038/ncomms9212.

6.

Corrigendum: Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax.

Fang X, Nevo E, Han L, Levanon EY, Zhao J, Avivi A, Larkin D, Jiang X, Feranchuk S, Zhu Y, Fishman A, Feng Y, Sher N, Xiong Z, Hankeln T, Huang Z, Gorbunova V, Zhang L, Zhao W, Wildman DE, Xiong Y, Gudkov A, Zheng Q, Rechavi G, Liu S, Bazak L, Chen J, Knisbacher BA, Lu Y, Shams I, Gajda K, Farré M, Kim J, Lewin HA, Ma J, Band M, Bicker A, Kranz A, Mattheus T, Schmidt H, Seluanov A, Azpurua J, McGowen MR, Ben Jacob E, Li K, Peng S, Zhu X, Liao X, Li S, Krogh A, Zhou X, Brodsky L, Wang J.

Nat Commun. 2015 Aug 12;6:8051. doi: 10.1038/ncomms9051. No abstract available.

PMID:
26264976
7.

Genome sequencing of the perciform fish Larimichthys crocea provides insights into molecular and genetic mechanisms of stress adaptation.

Ao J, Mu Y, Xiang LX, Fan D, Feng M, Zhang S, Shi Q, Zhu LY, Li T, Ding Y, Nie L, Li Q, Dong WR, Jiang L, Sun B, Zhang X, Li M, Zhang HQ, Xie S, Zhu Y, Jiang X, Wang X, Mu P, Chen W, Yue Z, Wang Z, Wang J, Shao JZ, Chen X.

PLoS Genet. 2015 Apr 2;11(4):e1005118. doi: 10.1371/journal.pgen.1005118. eCollection 2015 Apr.

8.

Adaptations to a subterranean environment and longevity revealed by the analysis of mole rat genomes.

Fang X, Seim I, Huang Z, Gerashchenko MV, Xiong Z, Turanov AA, Zhu Y, Lobanov AV, Fan D, Yim SH, Yao X, Ma S, Yang L, Lee SG, Kim EB, Bronson RT, Šumbera R, Buffenstein R, Zhou X, Krogh A, Park TJ, Zhang G, Wang J, Gladyshev VN.

Cell Rep. 2014 Sep 11;8(5):1354-64. doi: 10.1016/j.celrep.2014.07.030. Epub 2014 Aug 28.

9.

Aragonite shells are more ancient than calcite ones in bivalves: new evidence based on omics.

Wang X, Li L, Zhu Y, Song X, Fang X, Huang R, Que H, Zhang G.

Mol Biol Rep. 2014 Nov;41(11):7067-71. doi: 10.1007/s11033-014-3620-9. Epub 2014 Jul 26.

PMID:
25063580
10.

Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax.

Fang X, Nevo E, Han L, Levanon EY, Zhao J, Avivi A, Larkin D, Jiang X, Feranchuk S, Zhu Y, Fishman A, Feng Y, Sher N, Xiong Z, Hankeln T, Huang Z, Gorbunova V, Zhang L, Zhao W, Wildman DE, Xiong Y, Gudkov A, Zheng Q, Rechavi G, Liu S, Bazak L, Chen J, Knisbacher BA, Lu Y, Shams I, Gajda K, Farré M, Kim J, Lewin HA, Ma J, Band M, Bicker A, Kranz A, Mattheus T, Schmidt H, Seluanov A, Azpurua J, McGowen MR, Ben Jacob E, Li K, Peng S, Zhu X, Liao X, Li S, Krogh A, Zhou X, Brodsky L, Wang J.

Nat Commun. 2014 Jun 3;5:3966. doi: 10.1038/ncomms4966. Erratum in: Nat Commun. 2015;6:8051.

PMID:
24892994
11.

Spider genomes provide insight into composition and evolution of venom and silk.

Sanggaard KW, Bechsgaard JS, Fang X, Duan J, Dyrlund TF, Gupta V, Jiang X, Cheng L, Fan D, Feng Y, Han L, Huang Z, Wu Z, Liao L, Settepani V, Thøgersen IB, Vanthournout B, Wang T, Zhu Y, Funch P, Enghild JJ, Schauser L, Andersen SU, Villesen P, Schierup MH, Bilde T, Wang J.

Nat Commun. 2014 May 6;5:3765. doi: 10.1038/ncomms4765. Erratum in: Nat Commun. 2014;5:4590.

12.

The locust genome provides insight into swarm formation and long-distance flight.

Wang X, Fang X, Yang P, Jiang X, Jiang F, Zhao D, Li B, Cui F, Wei J, Ma C, Wang Y, He J, Luo Y, Wang Z, Guo X, Guo W, Wang X, Zhang Y, Yang M, Hao S, Chen B, Ma Z, Yu D, Xiong Z, Zhu Y, Fan D, Han L, Wang B, Chen Y, Wang J, Yang L, Zhao W, Feng Y, Chen G, Lian J, Li Q, Huang Z, Yao X, Lv N, Zhang G, Li Y, Wang J, Wang J, Zhu B, Kang L.

Nat Commun. 2014;5:2957. doi: 10.1038/ncomms3957.

13.

Transcriptome sequences resolve deep relationships of the grape family.

Wen J, Xiong Z, Nie ZL, Mao L, Zhu Y, Kan XZ, Ickert-Bond SM, Gerrath J, Zimmer EA, Fang XD.

PLoS One. 2013 Sep 17;8(9):e74394. doi: 10.1371/journal.pone.0074394. eCollection 2013.

14.

Genome analysis reveals insights into physiology and longevity of the Brandt's bat Myotis brandtii.

Seim I, Fang X, Xiong Z, Lobanov AV, Huang Z, Ma S, Feng Y, Turanov AA, Zhu Y, Lenz TL, Gerashchenko MV, Fan D, Hee Yim S, Yao X, Jordan D, Xiong Y, Ma Y, Lyapunov AN, Chen G, Kulakova OI, Sun Y, Lee SG, Bronson RT, Moskalev AA, Sunyaev SR, Zhang G, Krogh A, Wang J, Gladyshev VN.

Nat Commun. 2013;4:2212. doi: 10.1038/ncomms3212.

15.

Transcriptome analysis reveals a rich gene set related to innate immunity in the Eastern oyster (Crassostrea virginica).

Zhang L, Li L, Zhu Y, Zhang G, Guo X.

Mar Biotechnol (NY). 2014 Feb;16(1):17-33. doi: 10.1007/s10126-013-9526-z. Epub 2013 Aug 2.

PMID:
23907648
16.

Oyster Shell Proteins Originate from Multiple Organs and Their Probable Transport Pathway to the Shell Formation Front.

Wang X, Li L, Zhu Y, Du Y, Song X, Chen Y, Huang R, Que H, Fang X, Zhang G.

PLoS One. 2013 Jun 19;8(6):e66522. doi: 10.1371/journal.pone.0066522. Print 2013.

17.

Comparative analysis of bat genomes provides insight into the evolution of flight and immunity.

Zhang G, Cowled C, Shi Z, Huang Z, Bishop-Lilly KA, Fang X, Wynne JW, Xiong Z, Baker ML, Zhao W, Tachedjian M, Zhu Y, Zhou P, Jiang X, Ng J, Yang L, Wu L, Xiao J, Feng Y, Chen Y, Sun X, Zhang Y, Marsh GA, Crameri G, Broder CC, Frey KG, Wang LF, Wang J.

Science. 2013 Jan 25;339(6118):456-60. doi: 10.1126/science.1230835. Epub 2012 Dec 20.

18.

The oyster genome reveals stress adaptation and complexity of shell formation.

Zhang G, Fang X, Guo X, Li L, Luo R, Xu F, Yang P, Zhang L, Wang X, Qi H, Xiong Z, Que H, Xie Y, Holland PW, Paps J, Zhu Y, Wu F, Chen Y, Wang J, Peng C, Meng J, Yang L, Liu J, Wen B, Zhang N, Huang Z, Zhu Q, Feng Y, Mount A, Hedgecock D, Xu Z, Liu Y, Domazet-Lošo T, Du Y, Sun X, Zhang S, Liu B, Cheng P, Jiang X, Li J, Fan D, Wang W, Fu W, Wang T, Wang B, Zhang J, Peng Z, Li Y, Li N, Wang J, Chen M, He Y, Tan F, Song X, Zheng Q, Huang R, Yang H, Du X, Chen L, Yang M, Gaffney PM, Wang S, Luo L, She Z, Ming Y, Huang W, Zhang S, Huang B, Zhang Y, Qu T, Ni P, Miao G, Wang J, Wang Q, Steinberg CE, Wang H, Li N, Qian L, Zhang G, Li Y, Yang H, Liu X, Wang J, Yin Y, Wang J.

Nature. 2012 Oct 4;490(7418):49-54. doi: 10.1038/nature11413. Epub 2012 Sep 19.

PMID:
22992520
19.

Genome sequencing reveals insights into physiology and longevity of the naked mole rat.

Kim EB, Fang X, Fushan AA, Huang Z, Lobanov AV, Han L, Marino SM, Sun X, Turanov AA, Yang P, Yim SH, Zhao X, Kasaikina MV, Stoletzki N, Peng C, Polak P, Xiong Z, Kiezun A, Zhu Y, Chen Y, Kryukov GV, Zhang Q, Peshkin L, Yang L, Bronson RT, Buffenstein R, Wang B, Han C, Li Q, Chen L, Zhao W, Sunyaev SR, Park TJ, Zhang G, Wang J, Gladyshev VN.

Nature. 2011 Oct 12;479(7372):223-7. doi: 10.1038/nature10533.

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