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Items: 1 to 20 of 22

1.

Identification of epistasis loci underlying rice flowering time by controlling population stratification and polygenic effect.

Ahsan A, Monir M, Meng X, Rahaman M, Chen H, Chen M.

DNA Res. 2019 Apr 1;26(2):193. doi: 10.1093/dnares/dsz007. No abstract available.

2.

CircFunBase: a database for functional circular RNAs.

Meng X, Hu D, Zhang P, Chen Q, Chen M.

Database (Oxford). 2019 Jan 1;2019. doi: 10.1093/database/baz003.

3.

Identification of epistasis loci underlying rice flowering time by controlling population stratification and polygenic effect.

Ahsan A, Monir M, Meng X, Rahaman M, Chen H, Chen M.

DNA Res. 2019 Apr 1;26(2):119-130. doi: 10.1093/dnares/dsy043. Erratum in: DNA Res. 2019 Apr 1;26(2):193.

4.

Identification and characterization of ncRNA-associated ceRNA networks in Arabidopsis leaf development.

Meng X, Zhang P, Chen Q, Wang J, Chen M.

BMC Genomics. 2018 Aug 13;19(1):607. doi: 10.1186/s12864-018-4993-2.

5.

Dissecting LncRNA Roles in Renal Cell Carcinoma Metastasis and Characterizing Genomic Heterogeneity by Single-Cell RNA-seq.

Li X, Meng X, Wei C, Zhou Y, Chen H, Huang H, Chen M.

Mol Cancer Res. 2018 Dec;16(12):1879-1888. doi: 10.1158/1541-7786.MCR-17-0776. Epub 2018 Aug 6.

6.

Versatile interactions and bioinformatics analysis of noncoding RNAs.

Chen Q, Meng X, Liao Q, Chen M.

Brief Bioinform. 2019 Sep 27;20(5):1781-1794. doi: 10.1093/bib/bby050.

PMID:
29939215
7.

Computational investigation of small RNAs in the establishment of root nodules and arbuscular mycorrhiza in leguminous plants.

Jin D, Meng X, Wang Y, Wang J, Zhao Y, Chen M.

Sci China Life Sci. 2018 Jun;61(6):706-717. doi: 10.1007/s11427-017-9203-7. Epub 2018 Jan 3.

PMID:
29305786
8.

CircPro: an integrated tool for the identification of circRNAs with protein-coding potential.

Meng X, Chen Q, Zhang P, Chen M.

Bioinformatics. 2017 Oct 15;33(20):3314-3316. doi: 10.1093/bioinformatics/btx446.

PMID:
29028266
9.

Non-coding RNAs and Their Roles in Stress Response in Plants.

Wang J, Meng X, Dobrovolskaya OB, Orlov YL, Chen M.

Genomics Proteomics Bioinformatics. 2017 Oct;15(5):301-312. doi: 10.1016/j.gpb.2017.01.007. Epub 2017 Oct 7. Review.

10.

The integrated pathway of TGFβ/Snail with TNFα/NFκB may facilitate the tumor-stroma interaction in the EMT process and colorectal cancer prognosis.

Li H, Zhong A, Li S, Meng X, Wang X, Xu F, Lai M.

Sci Rep. 2017 Jul 7;7(1):4915. doi: 10.1038/s41598-017-05280-6.

11.

Genome-Wide Analysis of the Distinct Types of Chromatin Interactions in Arabidopsis thaliana.

Wang J, Zhou Y, Li X, Meng X, Fan M, Chen H, Xue J, Chen M.

Plant Cell Physiol. 2017 Jan 1;58(1):57-70. doi: 10.1093/pcp/pcw194.

PMID:
28064247
12.

PceRBase: a database of plant competing endogenous RNA.

Yuan C, Meng X, Li X, Illing N, Ingle RA, Wang J, Chen M.

Nucleic Acids Res. 2017 Jan 4;45(D1):D1009-D1014. doi: 10.1093/nar/gkw916. Epub 2016 Oct 7.

13.

PlantCircNet: a database for plant circRNA-miRNA-mRNA regulatory networks.

Zhang P, Meng X, Chen H, Liu Y, Xue J, Zhou Y, Chen M.

Database (Oxford). 2017 Jan 1;2017. pii: bax089. doi: 10.1093/database/bax089.

14.

Circular RNA: an emerging key player in RNA world.

Meng X, Li X, Zhang P, Wang J, Zhou Y, Chen M.

Brief Bioinform. 2017 Jul 1;18(4):547-557. doi: 10.1093/bib/bbw045. Review.

PMID:
27255916
15.

Genome-wide characterization and evolution analysis of miniature inverted-repeat transposable elements (MITEs) in moso bamboo (Phyllostachys heterocycla).

Zhou M, Tao G, Pi P, Zhu Y, Bai Y, Meng X.

Planta. 2016 Oct;244(4):775-87. doi: 10.1007/s00425-016-2544-0. Epub 2016 May 9.

PMID:
27160169
16.

Exploring the mechanisms of genome-wide long-range interactions: interpreting chromosome organization.

Wang J, Meng X, Chen H, Yuan C, Li X, Zhou Y, Chen M.

Brief Funct Genomics. 2016 Sep;15(5):385-95. doi: 10.1093/bfgp/elv062. Epub 2016 Jan 14. Review.

PMID:
26769147
17.

The tumor microenvironment: An irreplaceable element of tumor budding and epithelial-mesenchymal transition-mediated cancer metastasis.

Li H, Xu F, Li S, Zhong A, Meng X, Lai M.

Cell Adh Migr. 2016 Jul 3;10(4):434-46. doi: 10.1080/19336918.2015.1129481. Epub 2016 Jan 8. Review.

18.

The roles of cross-talk epigenetic patterns in Arabidopsis thaliana.

Wang J, Meng X, Yuan C, Harrison AP, Chen M.

Brief Funct Genomics. 2016 Jul;15(4):278-87. doi: 10.1093/bfgp/elv025. Epub 2015 Jul 2. Review.

PMID:
26141715
19.

Genome-wide view of natural antisense transcripts in Arabidopsis thaliana.

Yuan C, Wang J, Harrison AP, Meng X, Chen D, Chen M.

DNA Res. 2015 Jun;22(3):233-43. doi: 10.1093/dnares/dsv008. Epub 2015 Apr 28.

20.

Genome-wide identification and evolution of HECT genes in soybean.

Meng X, Wang C, Rahman SU, Wang Y, Wang A, Tao S.

Int J Mol Sci. 2015 Apr 16;16(4):8517-35. doi: 10.3390/ijms16048517.

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