Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 20 of 46

1.

Tally-2.0: upgraded validator of tandem repeat detection in protein sequences.

Perovic V, Leclercq JY, Sumonja N, Richard FD, Veljkovic N, Kajava AV.

Bioinformatics. 2020 Feb 25. pii: btaa121. doi: 10.1093/bioinformatics/btaa121. [Epub ahead of print]

PMID:
32096820
2.

The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens.

Zhou N, Jiang Y, Bergquist TR, Lee AJ, Kacsoh BZ, Crocker AW, Lewis KA, Georghiou G, Nguyen HN, Hamid MN, Davis L, Dogan T, Atalay V, Rifaioglu AS, Dalkıran A, Cetin Atalay R, Zhang C, Hurto RL, Freddolino PL, Zhang Y, Bhat P, Supek F, Fernández JM, Gemovic B, Perovic VR, Davidović RS, Sumonja N, Veljkovic N, Asgari E, Mofrad MRK, Profiti G, Savojardo C, Martelli PL, Casadio R, Boecker F, Schoof H, Kahanda I, Thurlby N, McHardy AC, Renaux A, Saidi R, Gough J, Freitas AA, Antczak M, Fabris F, Wass MN, Hou J, Cheng J, Wang Z, Romero AE, Paccanaro A, Yang H, Goldberg T, Zhao C, Holm L, Törönen P, Medlar AJ, Zosa E, Borukhov I, Novikov I, Wilkins A, Lichtarge O, Chi PH, Tseng WC, Linial M, Rose PW, Dessimoz C, Vidulin V, Dzeroski S, Sillitoe I, Das S, Lees JG, Jones DT, Wan C, Cozzetto D, Fa R, Torres M, Warwick Vesztrocy A, Rodriguez JM, Tress ML, Frasca M, Notaro M, Grossi G, Petrini A, Re M, Valentini G, Mesiti M, Roche DB, Reeb J, Ritchie DW, Aridhi S, Alborzi SZ, Devignes MD, Koo DCE, Bonneau R, Gligorijević V, Barot M, Fang H, Toppo S, Lavezzo E, Falda M, Berselli M, Tosatto SCE, Carraro M, Piovesan D, Ur Rehman H, Mao Q, Zhang S, Vucetic S, Black GS, Jo D, Suh E, Dayton JB, Larsen DJ, Omdahl AR, McGuffin LJ, Brackenridge DA, Babbitt PC, Yunes JM, Fontana P, Zhang F, Zhu S, You R, Zhang Z, Dai S, Yao S, Tian W, Cao R, Chandler C, Amezola M, Johnson D, Chang JM, Liao WH, Liu YW, Pascarelli S, Frank Y, Hoehndorf R, Kulmanov M, Boudellioua I, Politano G, Di Carlo S, Benso A, Hakala K, Ginter F, Mehryary F, Kaewphan S, Björne J, Moen H, Tolvanen MEE, Salakoski T, Kihara D, Jain A, Šmuc T, Altenhoff A, Ben-Hur A, Rost B, Brenner SE, Orengo CA, Jeffery CJ, Bosco G, Hogan DA, Martin MJ, O'Donovan C, Mooney SD, Greene CS, Radivojac P, Friedberg I.

Genome Biol. 2019 Nov 19;20(1):244. doi: 10.1186/s13059-019-1835-8.

3.

DiNGO: standalone application for Gene Ontology and Human Phenotype Ontology term enrichment analysis.

Davidović R, Perovic V, Gemovic B, Veljkovic N.

Bioinformatics. 2019 Nov 8. pii: btz836. doi: 10.1093/bioinformatics/btz836. [Epub ahead of print]

PMID:
31702762
4.

Automated feature engineering improves prediction of protein-protein interactions.

Sumonja N, Gemovic B, Veljkovic N, Perovic V.

Amino Acids. 2019 Aug;51(8):1187-1200. doi: 10.1007/s00726-019-02756-9. Epub 2019 Jul 5.

PMID:
31278492
5.

Virtual Screen for Repurposing of Drugs for Candidate Influenza a M2 Ion-Channel Inhibitors.

Radosevic D, Sencanski M, Perovic V, Veljkovic N, Prljic J, Veljkovic V, Mantlo E, Bukreyeva N, Paessler S, Glisic S.

Front Cell Infect Microbiol. 2019 Mar 26;9:67. doi: 10.3389/fcimb.2019.00067. eCollection 2019.

6.

Xanthone-rich extract from Gentiana dinarica transformed roots and its active component norswertianin induce autophagy and ROS-dependent differentiation of human glioblastoma cell line.

Tovilovic-Kovacevic G, Krstic-Milosevic D, Vinterhalter B, Toljic M, Perovic V, Trajkovic V, Harhaji-Trajkovic L, Zogovic N.

Phytomedicine. 2018 Aug 1;47:151-160. doi: 10.1016/j.phymed.2018.03.052. Epub 2018 Mar 19.

PMID:
30166100
7.

IDPpi: Protein-Protein Interaction Analyses of Human Intrinsically Disordered Proteins.

Perovic V, Sumonja N, Marsh LA, Radovanovic S, Vukicevic M, Roberts SGE, Veljkovic N.

Sci Rep. 2018 Jul 12;8(1):10563. doi: 10.1038/s41598-018-28815-x.

8.

Cytokine Gene Polymorphism Profiles in Kidney Transplant Patients - Association of +1188A/C RS3212227 SNP in the IL12B Gene Prevents Delayed Graft Function.

Perovic V, Markovic M, Kravljaca M, Milosevic E, Djoric M, Pravica V, Naumovic R.

Arch Med Res. 2018 Feb;49(2):101-108. doi: 10.1016/j.arcmed.2018.04.015. Epub 2018 May 10.

PMID:
29754746
9.

MDR1 gene polymorphisms are associated with ulcerative colitis in a cohort of Serbian patients with inflammatory bowel disease.

Mijac D, Vukovic-Petrovic I, Mijac V, Perovic V, Milic N, Djuranovic S, Bojic D, Popovic D, Culafic D, Krstic M, Jankovic G, Pravica V, Markovic M.

PLoS One. 2018 Mar 15;13(3):e0194536. doi: 10.1371/journal.pone.0194536. eCollection 2018.

10.

Mapping of Protein-Protein Interactions: Web-Based Resources for Revealing Interactomes.

Gemovic B, Sumonja N, Davidovic R, Perovic V, Veljkovic N.

Curr Med Chem. 2019;26(21):3890-3910. doi: 10.2174/0929867325666180214113704. Review.

PMID:
29446725
11.

Identification of Candidate Allosteric Modulators of the M1 Muscarinic Acetylcholine Receptor Which May Improve Vagus Nerve Stimulation in Chronic Tinnitus.

Bojić T, Perović VR, Senćanski M, Glišić S.

Front Neurosci. 2017 Nov 14;11:636. doi: 10.3389/fnins.2017.00636. eCollection 2017.

12.

Ibuprofen as a template molecule for drug design against Ebola virus.

Paessler S, Huang C, Sencanski M, Veljkovic N, Perovic V, Glisic S, Veljkovic V.

Front Biosci (Landmark Ed). 2018 Jan 1;23:947-953.

PMID:
28930583
13.

A simple method for calculation of basic molecular properties of nutrients and their use as a criterion for a healthy diet.

Veljkovic V, Perovic V, Anderluh M, Paessler S, Veljkovic M, Glisic S, Nicolson G.

F1000Res. 2017 Jan 5;6:13. doi: 10.12688/f1000research.10537.1. eCollection 2017.

14.

Predicted Enhanced Human Propensity of Current Avian-Like H1N1 Swine Influenza Virus from China.

Veljkovic V, Veljkovic N, Paessler S, Goeijenbier M, Perovic V, Glisic S, Muller CP.

PLoS One. 2016 Nov 9;11(11):e0165451. doi: 10.1371/journal.pone.0165451. eCollection 2016.

15.

TRI_tool: a web-tool for prediction of protein-protein interactions in human transcriptional regulation.

Perovic V, Sumonja N, Gemovic B, Toska E, Roberts SG, Veljkovic N.

Bioinformatics. 2017 Jan 15;33(2):289-291. doi: 10.1093/bioinformatics/btw590. Epub 2016 Sep 7.

16.

The Polymorphism rs3024505 (C/T) Downstream of the IL10 Gene Is Associated with Crohn's Disease in Serbian Patients with Inflammatory Bowel Disease.

Mijac D, Petrovic IV, Djuranovic S, Perovic V, Bojic D, Culafic D, Popovic D, Krstic M, Jankovic G, Djoric M, Pravica V, Markovic M.

Tohoku J Exp Med. 2016 Sep;240(1):15-24. doi: 10.1620/tjem.240.15.

17.

Evaluation of cytokine genetic polymorphisms in adult patients with common variable immunodeficiency: A single-center study.

Perovic D, Perovic V, Pravica V, Bonaci-Nikolic B, Mijanovic R, Bunjevacki V.

Immunol Lett. 2016 Aug;176:97-104. doi: 10.1016/j.imlet.2016.05.005. Epub 2016 Jun 8.

PMID:
27288995
18.

A combined ligand- and structure-based approach for the identification of rilmenidine-derived compounds which synergize the antitumor effects of doxorubicin.

Vucicevic J, Srdic-Rajic T, Pieroni M, Laurila JM, Perovic V, Tassini S, Azzali E, Costantino G, Glisic S, Agbaba D, Scheinin M, Nikolic K, Radi M, Veljkovic N.

Bioorg Med Chem. 2016 Jul 15;24(14):3174-83. doi: 10.1016/j.bmc.2016.05.043. Epub 2016 May 24.

PMID:
27265687
19.

Arginase Flavonoid Anti-Leishmanial in Silico Inhibitors Flagged against Anti-Targets.

Glisic S, Sencanski M, Perovic V, Stevanovic S, García-Sosa AT.

Molecules. 2016 May 5;21(5). pii: E589. doi: 10.3390/molecules21050589.

20.

Common molecular mechanism of the hepatic lesion and the cardiac parasympathetic regulation in chronic hepatitis C infection: a critical role for the muscarinic receptor type 3.

Glišić S, Cavanaugh DP, Chittur KK, Sencanski M, Perovic V, Bojić T.

BMC Bioinformatics. 2016 Mar 22;17:139. doi: 10.1186/s12859-016-0988-7.

Supplemental Content

Loading ...
Support Center