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Items: 1 to 20 of 30

1.

Low-Resolution Models for the Interaction Dynamics of Coated Gold Nanoparticles with β2-microglobulin.

Brancolini G, Lopez H, Corni S, Tozzini V.

Int J Mol Sci. 2019 Aug 8;20(16). pii: E3866. doi: 10.3390/ijms20163866.

2.

Building Minimalist Models for Functionalized Metal Nanoparticles.

Brancolini G, Tozzini V.

Front Mol Biosci. 2019 Jul 2;6:50. doi: 10.3389/fmolb.2019.00050. eCollection 2019. No abstract available.

3.

Intrinsic structural and electronic properties of the Buffer Layer on Silicon Carbide unraveled by Density Functional Theory.

Cavallucci T, Tozzini V.

Sci Rep. 2018 Aug 30;8(1):13097. doi: 10.1038/s41598-018-31490-7.

4.

Electronic properties of single-layer tungsten disulfide on epitaxial graphene on silicon carbide.

Forti S, Rossi A, Büch H, Cavallucci T, Bisio F, Sala A, Menteş TO, Locatelli A, Magnozzi M, Canepa M, Müller K, Link S, Starke U, Tozzini V, Coletti C.

Nanoscale. 2017 Nov 2;9(42):16412-16419. doi: 10.1039/c7nr05495e.

PMID:
29058741
5.

Optimization of Analytical Potentials for Coarse-Grained Biopolymer Models.

Mereghetti P, Maccari G, Spampinato GL, Tozzini V.

J Phys Chem B. 2016 Aug 25;120(33):8571-9. doi: 10.1021/acs.jpcb.6b02555. Epub 2016 May 18.

PMID:
27150459
6.

2D materials. Graphene, related two-dimensional crystals, and hybrid systems for energy conversion and storage.

Bonaccorso F, Colombo L, Yu G, Stoller M, Tozzini V, Ferrari AC, Ruoff RS, Pellegrini V.

Science. 2015 Jan 2;347(6217):1246501. doi: 10.1126/science.1246501.

PMID:
25554791
7.

Diffusion within the cytoplasm: a mesoscale model of interacting macromolecules.

Trovato F, Tozzini V.

Biophys J. 2014 Dec 2;107(11):2579-91. doi: 10.1016/j.bpj.2014.09.043. Epub 2014 Dec 2.

8.

A multi-scale-multi-stable model for the rhodopsin photocycle.

Tavanti F, Tozzini V.

Molecules. 2014 Sep 18;19(9):14961-78. doi: 10.3390/molecules190914961.

9.

Minimalist Model for the Dynamics of Helical Polypeptides: A Statistic-Based Parametrization.

Spampinato GL, Maccari G, Tozzini V.

J Chem Theory Comput. 2014 Sep 9;10(9):3885-95. doi: 10.1021/ct5004059. Epub 2014 Jul 31.

PMID:
26588532
10.

Evolutionary Algorithm in the Optimization of a Coarse-Grained Force Field.

Leonarski F, Trovato F, Tozzini V, Leś A, Trylska J.

J Chem Theory Comput. 2013 Nov 12;9(11):4874-89. doi: 10.1021/ct4005036. Epub 2013 Oct 21.

PMID:
26583407
11.

SecStAnT: secondary structure analysis tool for data selection, statistics and models building.

Maccari G, Spampinato GL, Tozzini V.

Bioinformatics. 2014 Mar 1;30(5):668-74. doi: 10.1093/bioinformatics/btt586. Epub 2013 Oct 15.

PMID:
24130306
12.

Prospects for hydrogen storage in graphene.

Tozzini V, Pellegrini V.

Phys Chem Chem Phys. 2013 Jan 7;15(1):80-9. doi: 10.1039/c2cp42538f. Epub 2012 Nov 19.

PMID:
23165421
13.

Minimalist models for proteins: a comparative analysis.

Tozzini V.

Q Rev Biophys. 2010 Aug;43(3):333-71. doi: 10.1017/S0033583510000132. Epub 2010 Aug 16. Review.

PMID:
20707940
14.

GCN5-dependent acetylation of HIV-1 integrase enhances viral integration.

Terreni M, Valentini P, Liverani V, Gutierrez MI, Di Primio C, Di Fenza A, Tozzini V, Allouch A, Albanese A, Giacca M, Cereseto A.

Retrovirology. 2010 Mar 12;7:18. doi: 10.1186/1742-4690-7-18.

15.

Multiscale modeling of proteins.

Tozzini V.

Acc Chem Res. 2010 Feb 16;43(2):220-30. doi: 10.1021/ar9001476.

PMID:
19785400
16.

Complexes of HIV-1 integrase with HAT proteins: multiscale models, dynamics, and hypotheses on allosteric sites of inhibition.

Di Fenza A, Rocchia W, Tozzini V.

Proteins. 2009 Sep;76(4):946-58. doi: 10.1002/prot.22399.

PMID:
19306343
17.

Raman study of chromophore states in photochromic fluorescent proteins.

Luin S, Voliani V, Lanza G, Bizzarri R, Amat P, Tozzini V, Serresi M, Beltram F.

J Am Chem Soc. 2009 Jan 14;131(1):96-103. doi: 10.1021/ja804504b.

PMID:
19061323
18.

Supercoiling and local denaturation of plasmids with a minimalist DNA model.

Trovato F, Tozzini V.

J Phys Chem B. 2008 Oct 23;112(42):13197-200. doi: 10.1021/jp807085d. Epub 2008 Sep 30.

PMID:
18826184
19.

Coarse-grained force field for the nucleosome from self-consistent multiscaling.

Voltz K, Trylska J, Tozzini V, Kurkal-Siebert V, Langowski J, Smith J.

J Comput Chem. 2008 Jul 15;29(9):1429-39. doi: 10.1002/jcc.20902.

PMID:
18270964
20.

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