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Items: 9

1.

Multioutput Convolution Spectral Mixture for Gaussian Processes.

Chen K, van Laarhoven T, Groot P, Chen J, Marchiori E.

IEEE Trans Neural Netw Learn Syst. 2019 Dec 17. doi: 10.1109/TNNLS.2019.2946082. [Epub ahead of print]

PMID:
31869802
2.

Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen.

Menden MP, Wang D, Mason MJ, Szalai B, Bulusu KC, Guan Y, Yu T, Kang J, Jeon M, Wolfinger R, Nguyen T, Zaslavskiy M; AstraZeneca-Sanger Drug Combination DREAM Consortium, Jang IS, Ghazoui Z, Ahsen ME, Vogel R, Neto EC, Norman T, Tang EKY, Garnett MJ, Veroli GYD, Fawell S, Stolovitzky G, Guinney J, Dry JR, Saez-Rodriguez J.

Nat Commun. 2019 Jun 17;10(1):2674. doi: 10.1038/s41467-019-09799-2.

3.

Novelty Detection using Deep Normative Modeling for IMU-Based Abnormal Movement Monitoring in Parkinson's Disease and Autism Spectrum Disorders.

Mohammadian Rad N, van Laarhoven T, Furlanello C, Marchiori E.

Sensors (Basel). 2018 Oct 19;18(10). pii: E3533. doi: 10.3390/s18103533.

4.

Generative models for local network community detection.

van Laarhoven T.

Phys Rev E. 2018 Apr;97(4-1):042316. doi: 10.1103/PhysRevE.97.042316.

PMID:
29758619
5.

Convolutional neural networks for vibrational spectroscopic data analysis.

Acquarelli J, van Laarhoven T, Gerretzen J, Tran TN, Buydens LMC, Marchiori E.

Anal Chim Acta. 2017 Feb 15;954:22-31. doi: 10.1016/j.aca.2016.12.010. Epub 2016 Dec 27.

PMID:
28081811
6.

Local quality functions for graph clustering with non-negative matrix factorization.

van Laarhoven T, Marchiori E.

Phys Rev E Stat Nonlin Soft Matter Phys. 2014 Dec;90(6):062813. Epub 2014 Dec 29.

PMID:
25615154
7.

Predicting Drug-Target Interactions for New Drug Compounds Using a Weighted Nearest Neighbor Profile.

van Laarhoven T, Marchiori E.

PLoS One. 2013 Jun 26;8(6):e66952. doi: 10.1371/journal.pone.0066952. Print 2013.

8.

Graph clustering with local search optimization: the resolution bias of the objective function matters most.

van Laarhoven T, Marchiori E.

Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Jan;87(1):012812. Epub 2013 Jan 25.

PMID:
23410393
9.

Gaussian interaction profile kernels for predicting drug-target interaction.

van Laarhoven T, Nabuurs SB, Marchiori E.

Bioinformatics. 2011 Nov 1;27(21):3036-43. doi: 10.1093/bioinformatics/btr500. Epub 2011 Sep 4.

PMID:
21893517

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