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Items: 1 to 20 of 24

1.

Structural adaptations of photosynthetic complex I enable ferredoxin-dependent electron transfer.

Schuller JM, Birrell JA, Tanaka H, Konuma T, Wulfhorst H, Cox N, Schuller SK, Thiemann J, Lubitz W, Sétif P, Ikegami T, Engel BD, Kurisu G, Nowaczyk MM.

Science. 2019 Jan 18;363(6424):257-260. doi: 10.1126/science.aau3613. Epub 2018 Dec 20.

PMID:
30573545
2.

A New Quinoline BRD4 Inhibitor Targets a Distinct Latent HIV-1 Reservoir for Reactivation from Other "Shock" Drugs.

Abner E, Stoszko M, Zeng L, Chen HC, Izquierdo-Bouldstridge A, Konuma T, Zorita E, Fanunza E, Zhang Q, Mahmoudi T, Zhou MM, Filion GJ, Jordan A.

J Virol. 2018 Apr 27;92(10). pii: e02056-17. doi: 10.1128/JVI.02056-17. Print 2018 May 15.

3.

Structural Mechanism of the Oxygenase JMJD6 Recognition by the Extraterminal (ET) Domain of BRD4.

Konuma T, Yu D, Zhao C, Ju Y, Sharma R, Ren C, Zhang Q, Zhou MM, Zeng L.

Sci Rep. 2017 Nov 24;7(1):16272. doi: 10.1038/s41598-017-16588-8.

4.

Non-Native α-Helices in the Initial Folding Intermediate Facilitate the Ordered Assembly of the β-Barrel in β-Lactoglobulin.

Sakurai K, Yagi M, Konuma T, Takahashi S, Nishimura C, Goto Y.

Biochemistry. 2017 Sep 12;56(36):4799-4807. doi: 10.1021/acs.biochem.7b00458. Epub 2017 Aug 31.

PMID:
28795569
5.

Distinct Roles of Brd2 and Brd4 in Potentiating the Transcriptional Program for Th17 Cell Differentiation.

Cheung KL, Zhang F, Jaganathan A, Sharma R, Zhang Q, Konuma T, Shen T, Lee JY, Ren C, Chen CH, Lu G, Olson MR, Zhang W, Kaplan MH, Littman DR, Walsh MJ, Xiong H, Zeng L, Zhou MM.

Mol Cell. 2017 Mar 16;65(6):1068-1080.e5. doi: 10.1016/j.molcel.2016.12.022. Epub 2017 Mar 3.

6.

Dynamics of the Extended String-Like Interaction of TFIIE with the p62 Subunit of TFIIH.

Okuda M, Higo J, Komatsu T, Konuma T, Sugase K, Nishimura Y.

Biophys J. 2016 Sep 6;111(5):950-62. doi: 10.1016/j.bpj.2016.07.042.

7.

Quantitative analysis of protein-ligand interactions by NMR.

Furukawa A, Konuma T, Yanaka S, Sugase K.

Prog Nucl Magn Reson Spectrosc. 2016 Aug;96:47-57. doi: 10.1016/j.pnmrs.2016.02.002. Epub 2016 Mar 3. Review.

PMID:
27573180
8.

Structural Insights into Histone Crotonyl-Lysine Recognition by the AF9 YEATS Domain.

Zhang Q, Zeng L, Zhao C, Ju Y, Konuma T, Zhou MM.

Structure. 2016 Sep 6;24(9):1606-12. doi: 10.1016/j.str.2016.05.023. Epub 2016 Aug 18.

9.

Structural Mechanism of Transcriptional Regulator NSD3 Recognition by the ET Domain of BRD4.

Zhang Q, Zeng L, Shen C, Ju Y, Konuma T, Zhao C, Vakoc CR, Zhou MM.

Structure. 2016 Jul 6;24(7):1201-8. doi: 10.1016/j.str.2016.04.019. Epub 2016 Jun 9.

10.

Use of glass capillaries to suppress thermal convection in NMR tubes in diffusion measurements.

Iwashita T, Konuma T, Harada E, Mori S, Sugase K.

Magn Reson Chem. 2016 Sep;54(9):729-733. doi: 10.1002/mrc.4437. Epub 2016 Apr 12.

PMID:
27072530
11.

Extracting protein dynamics information from overlapped NMR signals using relaxation dispersion difference NMR spectroscopy.

Konuma T, Harada E, Sugase K.

J Biomol NMR. 2015 Dec;63(4):367-373. doi: 10.1007/s10858-015-9995-7. Epub 2015 Oct 17.

PMID:
26476958
12.

Highly Collapsed Conformation of the Initial Folding Intermediates of β-Lactoglobulin with Non-Native α-Helix.

Konuma T, Sakurai K, Yagi M, Goto Y, Fujisawa T, Takahashi S.

J Mol Biol. 2015 Sep 25;427(19):3158-65. doi: 10.1016/j.jmb.2015.07.018. Epub 2015 Jul 30.

PMID:
26232603
13.

Solution structure of the ubiquitin-associated (UBA) domain of human autophagy receptor NBR1 and its interaction with ubiquitin and polyubiquitin.

Walinda E, Morimoto D, Sugase K, Konuma T, Tochio H, Shirakawa M.

J Biol Chem. 2014 May 16;289(20):13890-902. doi: 10.1074/jbc.M114.555441. Epub 2014 Apr 1.

14.

Fast and accurate fitting of relaxation dispersion data using the flexible software package GLOVE.

Sugase K, Konuma T, Lansing JC, Wright PE.

J Biomol NMR. 2013 Jul;56(3):275-83. doi: 10.1007/s10858-013-9747-5. Epub 2013 Jun 11.

15.

Principal component analysis of chemical shift perturbation data of a multiple-ligand-binding system for elucidation of respective binding mechanism.

Konuma T, Lee YH, Goto Y, Sakurai K.

Proteins. 2013 Jan;81(1):107-18. doi: 10.1002/prot.24166. Epub 2012 Sep 26.

PMID:
22927212
16.

The monomer-seed interaction mechanism in the formation of the β2-microglobulin amyloid fibril clarified by solution NMR techniques.

Yanagi K, Sakurai K, Yoshimura Y, Konuma T, Lee YH, Sugase K, Ikegami T, Naiki H, Goto Y.

J Mol Biol. 2012 Sep 21;422(3):390-402. doi: 10.1016/j.jmb.2012.05.034. Epub 2012 Jun 6.

PMID:
22683352
17.

Boosting protein dynamics studies using quantitative nonuniform sampling NMR spectroscopy.

Matsuki Y, Konuma T, Fujiwara T, Sugase K.

J Phys Chem B. 2011 Nov 24;115(46):13740-5. doi: 10.1021/jp2081116. Epub 2011 Nov 1.

PMID:
21992609
18.

Structure and stability of Gyuba, a β-lactoglobulin chimera.

Ohtomo H, Konuma T, Utsunoiya H, Tsuge H, Ikeguchi M.

Protein Sci. 2011 Nov;20(11):1867-75. doi: 10.1002/pro.720. Epub 2011 Sep 22.

19.

A circumventing role for the non-native intermediate in the folding of β-lactoglobulin.

Sakurai K, Fujioka S, Konuma T, Yagi M, Goto Y.

Biochemistry. 2011 Jul 26;50(29):6498-507. doi: 10.1021/bi200241a. Epub 2011 Jun 30.

PMID:
21678970
20.

Time-resolved small-angle X-ray scattering study of the folding dynamics of barnase.

Konuma T, Kimura T, Matsumoto S, Goto Y, Fujisawa T, Fersht AR, Takahashi S.

J Mol Biol. 2011 Feb 4;405(5):1284-94. doi: 10.1016/j.jmb.2010.11.052. Epub 2010 Dec 10.

PMID:
21146541

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