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Items: 1 to 20 of 74


Proteomic analysis of monolayer-integrated proteins on lipid droplets identifies amphipathic interfacial α-helical membrane anchors.

Pataki CI, Rodrigues J, Zhang L, Qian J, Efron B, Hastie T, Elias JE, Levitt M, Kopito RR.

Proc Natl Acad Sci U S A. 2018 Aug 13. pii: 201807981. doi: 10.1073/pnas.1807981115. [Epub ahead of print]


Gene expression profiling of low-grade endometrial stromal sarcoma indicates fusion protein-mediated activation of the Wnt signaling pathway.

Przybyl J, Kidzinski L, Hastie T, Debiec-Rychter M, Nusse R, van de Rijn M.

Gynecol Oncol. 2018 May;149(2):388-393. doi: 10.1016/j.ygyno.2018.03.007. Epub 2018 Mar 12.


Some methods for heterogeneous treatment effect estimation in high dimensions.

Powers S, Qian J, Jung K, Schuler A, Shah NH, Hastie T, Tibshirani R.

Stat Med. 2018 May 20;37(11):1767-1787. doi: 10.1002/sim.7623. Epub 2018 Mar 6.


FIRE: functional inference of genetic variants that regulate gene expression.

Ioannidis NM, Davis JR, DeGorter MK, Larson NB, McDonnell SK, French AJ, Battle AJ, Hastie TJ, Thibodeau SN, Montgomery SB, Bustamante CD, Sieh W, Whittemore AS.

Bioinformatics. 2017 Dec 15;33(24):3895-3901. doi: 10.1093/bioinformatics/btx534.


Combinatorial Extracellular Matrix Microenvironments for Probing Endothelial Differentiation of Human Pluripotent Stem Cells.

Hou L, Kim JJ, Wanjare M, Patlolla B, Coller J, Natu V, Hastie TJ, Huang NF.

Sci Rep. 2017 Jul 26;7(1):6551. doi: 10.1038/s41598-017-06986-3.


Prognostic significance of early aortic remodeling in acute uncomplicated type B aortic dissection and intramural hematoma.

Sailer AM, Nelemans PJ, Hastie TJ, Chin AS, Huininga M, Chiu P, Fischbein MP, Dake MD, Miller DC, Schurink GW, Fleischmann D.

J Thorac Cardiovasc Surg. 2017 Oct;154(4):1192-1200. doi: 10.1016/j.jtcvs.2017.04.064. Epub 2017 May 16.


Sparse EEG/MEG source estimation via a group lasso.

Lim M, Ales JM, Cottereau BR, Hastie T, Norcia AM.

PLoS One. 2017 Jun 12;12(6):e0176835. doi: 10.1371/journal.pone.0176835. eCollection 2017.


Accuracy in Wrist-Worn, Sensor-Based Measurements of Heart Rate and Energy Expenditure in a Diverse Cohort.

Shcherbina A, Mattsson CM, Waggott D, Salisbury H, Christle JW, Hastie T, Wheeler MT, Ashley EA.

J Pers Med. 2017 May 24;7(2). pii: E3. doi: 10.3390/jpm7020003.


Selection of effects in Cox frailty models by regularization methods.

Groll A, Hastie T, Tutz G.

Biometrics. 2017 Sep;73(3):846-856. doi: 10.1111/biom.12637. Epub 2017 Jan 13.


Construction of longitudinal prediction targets using semisupervised learning.

Jo B, Findling RL, Hastie TJ, Youngstrom EA, Wang CP, Arnold LE, Fristad MA, Frazier TW, Birmaher B, Gill MK, Horwitz SM.

Stat Methods Med Res. 2018 Sep;27(9):2674-2693. doi: 10.1177/0962280216684163. Epub 2017 Jan 8.


Synergistic drug combinations from electronic health records and gene expression.

Low YS, Daugherty AC, Schroeder EA, Chen W, Seto T, Weber S, Lim M, Hastie T, Mathur M, Desai M, Farrington C, Radin AA, Sirota M, Kenkare P, Thompson CA, Yu PP, Gomez SL, Sledge GW Jr, Kurian AW, Shah NH.

J Am Med Inform Assoc. 2017 May 1;24(3):565-576. doi: 10.1093/jamia/ocw161.


Targeted use of growth mixture modeling: a learning perspective.

Jo B, Findling RL, Wang CP, Hastie TJ, Youngstrom EA, Arnold LE, Fristad MA, Horwitz SM.

Stat Med. 2017 Feb 20;36(4):671-686. doi: 10.1002/sim.7152. Epub 2016 Nov 2.


Human amygdala engagement moderated by early life stress exposure is a biobehavioral target for predicting recovery on antidepressants.

Goldstein-Piekarski AN, Korgaonkar MS, Green E, Suppes T, Schatzberg AF, Hastie T, Nemeroff CB, Williams LM.

Proc Natl Acad Sci U S A. 2016 Oct 18;113(42):11955-11960. Epub 2016 Oct 10.


REVEL: An Ensemble Method for Predicting the Pathogenicity of Rare Missense Variants.

Ioannidis NM, Rothstein JH, Pejaver V, Middha S, McDonnell SK, Baheti S, Musolf A, Li Q, Holzinger E, Karyadi D, Cannon-Albright LA, Teerlink CC, Stanford JL, Isaacs WB, Xu J, Cooney KA, Lange EM, Schleutker J, Carpten JD, Powell IJ, Cussenot O, Cancel-Tassin G, Giles GG, MacInnis RJ, Maier C, Hsieh CL, Wiklund F, Catalona WJ, Foulkes WD, Mandal D, Eeles RA, Kote-Jarai Z, Bustamante CD, Schaid DJ, Hastie T, Ostrander EA, Bailey-Wilson JE, Radivojac P, Thibodeau SN, Whittemore AS, Sieh W.

Am J Hum Genet. 2016 Oct 6;99(4):877-885. doi: 10.1016/j.ajhg.2016.08.016. Epub 2016 Sep 22.


Combinatorial extracellular matrix microenvironments promote survival and phenotype of human induced pluripotent stem cell-derived endothelial cells in hypoxia.

Hou L, Coller J, Natu V, Hastie TJ, Huang NF.

Acta Biomater. 2016 Oct 15;44:188-99. doi: 10.1016/j.actbio.2016.08.003. Epub 2016 Aug 4.


Evaluating quantitative proton-density-mapping methods.

Mezer A, Rokem A, Berman S, Hastie T, Wandell BA.

Hum Brain Mapp. 2016 Oct;37(10):3623-35. doi: 10.1002/hbm.23264. Epub 2016 Jun 6.


Effective degrees of freedom: a flawed metaphor.

Janson L, Fithian W, Hastie TJ.

Biometrika. 2015 Jun 1;102(2):479-485. Epub 2015 May 4.


ZeitZeiger: supervised learning for high-dimensional data from an oscillatory system.

Hughey JJ, Hastie T, Butte AJ.

Nucleic Acids Res. 2016 May 5;44(8):e80. doi: 10.1093/nar/gkw030. Epub 2016 Jan 26.


Effect of long-term antibiotic use on weight in adolescents with acne.

Contopoulos-Ioannidis DG, Ley C, Wang W, Ma T, Olson C, Shi X, Luft HS, Hastie T, Parsonnet J.

J Antimicrob Chemother. 2016 Apr;71(4):1098-105. doi: 10.1093/jac/dkv455. Epub 2016 Jan 17.


Learning interactions via hierarchical group-lasso regularization.

Lim M, Hastie T.

J Comput Graph Stat. 2015;24(3):627-654. Epub 2015 Sep 16.

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