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Items: 7

1.

Computational Studies on Water-Catalyzed Mechanisms for Stereoinversion of Glutarimide Intermediates Formed from Glutamic Acid Residues in Aqueous Phase.

Nakayoshi T, Fukuyoshi S, Kato K, Kurimoto E, Oda A.

Int J Mol Sci. 2019 May 15;20(10). pii: E2410. doi: 10.3390/ijms20102410.

2.

Possible Mechanisms of Nonenzymatic Formation of Dehydroalanine Residue Catalyzed by Dihydrogen Phosphate Ion.

Nakayoshi T, Kato K, Kurimoto E, Oda A.

J Phys Chem B. 2019 Apr 18;123(15):3147-3155. doi: 10.1021/acs.jpcb.8b10386. Epub 2019 Apr 9.

PMID:
30916562
3.

Computational studies on the water-catalyzed stereoinversion mechanism of glutamic acid residues in peptides and proteins.

Nakayoshi T, Kato K, Fukuyoshi S, Takahashi O, Kurimoto E, Oda A.

Chirality. 2018 May;30(5):527-535. doi: 10.1002/chir.22841. Epub 2018 Mar 12.

PMID:
29528512
4.

Validation of molecular force field parameters for peptides including isomerized amino acids.

Oda A, Nakayoshi T, Fukuyoshi S, Kurimoto E, Yamaotsu N, Hirono S, Takahashi O.

Chirality. 2018 Apr;30(4):332-341. doi: 10.1002/chir.22821. Epub 2018 Feb 2.

PMID:
29393985
5.

Influences of conformations of peptides on stereoinversions and/or isomerizations of aspartic acid residues.

Oda A, Nakayoshi T, Fukuyoshi S, Kurimoto E, Takahashi O.

Biochim Biophys Acta Proteins Proteom. 2018 Jul;1866(7):783-788. doi: 10.1016/j.bbapap.2018.01.006. Epub 2018 Jan 11.

PMID:
29331333
6.

Comparison of the activation energy barrier for succinimide formation from α- and β-aspartic acid residues obtained from density functional theory calculations.

Nakayoshi T, Kato K, Fukuyoshi S, Takahashi O, Kurimoto E, Oda A.

Biochim Biophys Acta Proteins Proteom. 2018 Jul;1866(7):759-766. doi: 10.1016/j.bbapap.2017.12.011. Epub 2018 Jan 3.

PMID:
29305913
7.

Validation of Molecular Dynamics Simulations for Prediction of Three-Dimensional Structures of Small Proteins.

Kato K, Nakayoshi T, Fukuyoshi S, Kurimoto E, Oda A.

Molecules. 2017 Oct 12;22(10). pii: E1716. doi: 10.3390/molecules22101716.

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