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Items: 1 to 20 of 32

1.

Comparative transcriptomic analyses of chlorogenic acid and luteolosides biosynthesis pathways at different flowering stages of diploid and tetraploid Lonicera japonica.

Wang H, Li Y, Wang S, Kong D, Sahu SK, Bai M, Li H, Li L, Xu Y, Liang H, Liu H, Wu H.

PeerJ. 2020 Mar 6;8:e8690. doi: 10.7717/peerj.8690. eCollection 2020.

2.

The draft genome of mandrill (Mandrillus sphinx): An Old World monkey.

Yin Y, Yang T, Liu H, Huang Z, Zhang Y, Song Y, Wang W, Guang X, Sahu SK, Kristiansen K.

Sci Rep. 2020 Feb 12;10(1):2431. doi: 10.1038/s41598-020-59110-3.

3.

Draft Genomes of Two Artocarpus Plants, Jackfruit (A. heterophyllus) and Breadfruit (A. altilis).

Sahu SK, Liu M, Yssel A, Kariba R, Muthemba S, Jiang S, Song B, Hendre PS, Muchugi A, Jamnadass R, Kao SM, Featherston J, Zerega NJC, Xu X, Yang H, Deynze AV, Peer YV, Liu X, Liu H.

Genes (Basel). 2019 Dec 24;11(1). pii: E27. doi: 10.3390/genes11010027.

4.

Comparative Plastome Analysis of Root- and Stem-Feeding Parasites of Santalales Untangle the Footprints of Feeding Mode and Lifestyle Transitions.

Chen X, Fang D, Wu C, Liu B, Liu Y, Sahu SK, Song B, Yang S, Yang T, Wei J, Wang X, Zhang W, Xu Q, Wang H, Yuan L, Liao X, Chen L, Chen Z, Yuan F, Chang Y, Lu L, Yang H, Wang J, Xu X, Liu X, Wicke S, Liu H.

Genome Biol Evol. 2020 Jan 1;12(1):3663-3676. doi: 10.1093/gbe/evz271.

5.

Genomes of early-diverging streptophyte algae shed light on plant terrestrialization.

Wang S, Li L, Li H, Sahu SK, Wang H, Xu Y, Xian W, Song B, Liang H, Cheng S, Chang Y, Song Y, Çebi Z, Wittek S, Reder T, Peterson M, Yang H, Wang J, Melkonian B, Van de Peer Y, Xu X, Wong GK, Melkonian M, Liu H, Liu X.

Nat Plants. 2020 Feb;6(2):95-106. doi: 10.1038/s41477-019-0560-3. Epub 2019 Dec 16.

6.

Relationship between the Gut Microbiome and Energy/Nutrient Intake in a Confined Bioregenerative Life Support System.

Chen J, Wang Q, Hao Z, Li Z, Sahu SK, Liu H, Xiao L.

Appl Environ Microbiol. 2020 Feb 3;86(4). pii: e02465-19. doi: 10.1128/AEM.02465-19. Print 2020 Feb 3.

PMID:
31811045
7.

The Draft Genome of the Small, Spineless Green Alga Desmodesmus costato-granulatus (Sphaeropleales, Chlorophyta).

Wang S, Li L, Xu Y, Melkonian B, Lorenz M, Friedl T, Petersen M, Sahu SK, Melkonian M, Liu H.

Protist. 2019 Dec;170(6):125697. doi: 10.1016/j.protis.2019.125697. Epub 2019 Oct 25.

PMID:
31751779
8.

Autophagy in Plant Immunity.

Zeng HY, Zheng P, Wang LY, Bao HN, Sahu SK, Yao N.

Adv Exp Med Biol. 2019;1209:23-41. doi: 10.1007/978-981-15-0606-2_3. Review.

PMID:
31728863
9.

Molecular evidence for origin, diversification and ancient gene duplication of plant subtilases (SBTs).

Xu Y, Wang S, Li L, Sahu SK, Petersen M, Liu X, Melkonian M, Zhang G, Liu H.

Sci Rep. 2019 Aug 28;9(1):12485. doi: 10.1038/s41598-019-48664-6.

10.

Adverse drug events and medication relation extraction in electronic health records with ensemble deep learning methods.

Christopoulou F, Tran TT, Sahu SK, Miwa M, Ananiadou S.

J Am Med Inform Assoc. 2020 Jan 1;27(1):39-46. doi: 10.1093/jamia/ocz101.

11.

Deciphering the Composition and Functional Profile of the Microbial Communities in Chinese Moutai Liquor Starters.

Gan SH, Yang F, Sahu SK, Luo RY, Liao SL, Wang HY, Jin T, Wang L, Zhang PF, Liu X, Xu J, Xu J, Wang YY, Liu H.

Front Microbiol. 2019 Jul 4;10:1540. doi: 10.3389/fmicb.2019.01540. eCollection 2019.

12.

Improving Species Identification of Ancient Mammals Based on Next-Generation Sequencing Data.

Lan TM, Lin Y, Njaramba-Ngatia J, Guo XS, Li RG, Li HM, Kumar-Sahu S, Wang X, Yang XJ, Guo HB, Xu WH, Kristiansen K, Liu H, Xu YC.

Genes (Basel). 2019 Jul 5;10(7). pii: E509. doi: 10.3390/genes10070509.

13.

Phylogenomics Provides New Insights into Gains and Losses of Selenoproteins among Archaeplastida.

Liang H, Wei T, Xu Y, Li L, Kumar Sahu S, Wang H, Li H, Fu X, Zhang G, Melkonian M, Liu X, Wang S, Liu H.

Int J Mol Sci. 2019 Jun 20;20(12). pii: E3020. doi: 10.3390/ijms20123020.

14.

Fugacium Spliced Leader Genes Identified from Stranded RNA-Seq Datasets.

Song Y, Zaheri B, Liu M, Sahu SK, Liu H, Chen W, Song B, Morse D.

Microorganisms. 2019 Jun 11;7(6). pii: E171. doi: 10.3390/microorganisms7060171.

15.

African Orphan Crops Consortium (AOCC): status of developing genomic resources for African orphan crops.

Hendre PS, Muthemba S, Kariba R, Muchugi A, Fu Y, Chang Y, Song B, Liu H, Liu M, Liao X, Sahu SK, Wang S, Li L, Lu H, Peng S, Cheng S, Xu X, Yang H, Wang J, Liu X, Simons A, Shapiro HY, Mumm RH, Van Deynze A, Jamnadass R.

Planta. 2019 Sep;250(3):989-1003. doi: 10.1007/s00425-019-03156-9. Epub 2019 May 9. Review.

PMID:
31073657
16.

The Distribution of Tryptophan-Dependent Indole-3-Acetic Acid Synthesis Pathways in Bacteria Unraveled by Large-Scale Genomic Analysis.

Zhang P, Jin T, Kumar Sahu S, Xu J, Shi Q, Liu H, Wang Y.

Molecules. 2019 Apr 10;24(7). pii: E1411. doi: 10.3390/molecules24071411.

17.

Emergence of membrane sphingolipids as a potential therapeutic target.

Sahu SK, Hannun YA, Yao N.

Biochimie. 2019 Mar;158:257-264. doi: 10.1016/j.biochi.2019.01.018. Epub 2019 Jan 28. Review.

PMID:
30703477
18.

Molecular digitization of a botanical garden: high-depth whole-genome sequencing of 689 vascular plant species from the Ruili Botanical Garden.

Liu H, Wei J, Yang T, Mu W, Song B, Yang T, Fu Y, Wang X, Hu G, Li W, Zhou H, Chang Y, Chen X, Chen H, Cheng L, He X, Cai H, Cai X, Wang M, Li Y, Sahu SK, Yang J, Wang Y, Mu R, Liu J, Zhao J, Huang Z, Xu X, Liu X.

Gigascience. 2019 Apr 1;8(4). pii: giz007. doi: 10.1093/gigascience/giz007.

19.

The draft genomes of five agriculturally important African orphan crops.

Chang Y, Liu H, Liu M, Liao X, Sahu SK, Fu Y, Song B, Cheng S, Kariba R, Muthemba S, Hendre PS, Mayes S, Ho WK, Yssel AEJ, Kendabie P, Wang S, Li L, Muchugi A, Jamnadass R, Lu H, Peng S, Van Deynze A, Simons A, Yana-Shapiro H, Van de Peer Y, Xu X, Yang H, Wang J, Liu X.

Gigascience. 2019 Mar 1;8(3). pii: giy152. doi: 10.1093/gigascience/giy152.

20.

Drug-drug interaction extraction from biomedical texts using long short-term memory network.

Sahu SK, Anand A.

J Biomed Inform. 2018 Oct;86:15-24. doi: 10.1016/j.jbi.2018.08.005. Epub 2018 Aug 21.

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