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Items: 1 to 20 of 54

1.

Distinct Functions of the Cap-Binding Complex in Stimulation of Nuclear mRNA Export.

Sen R, Barman P, Kaja A, Ferdoush J, Lahudkar S, Roy A, Bhaumik SR.

Mol Cell Biol. 2019 Apr 2;39(8). pii: e00540-18. doi: 10.1128/MCB.00540-18. Print 2019 Apr 15.

PMID:
30745412
2.

Mechanisms of Antisense Transcription Initiation with Implications in Gene Expression, Genomic Integrity and Disease Pathogenesis.

Barman P, Reddy D, Bhaumik SR.

Noncoding RNA. 2019 Jan 21;5(1). pii: E11. doi: 10.3390/ncrna5010011. Review.

3.

TOR Facilitates the Targeting of the 19S Proteasome Subcomplex To Enhance Transcription Complex Assembly at the Promoters of the Ribosomal Protein Genes.

Uprety B, Kaja A, Bhaumik SR.

Mol Cell Biol. 2018 Jun 28;38(14). pii: e00469-17. doi: 10.1128/MCB.00469-17. Print 2018 Jul 15.

4.

PD2/PAF1 at the Crossroads of the Cancer Network.

Karmakar S, Dey P, Vaz AP, Bhaumik SR, Ponnusamy MP, Batra SK.

Cancer Res. 2018 Jan 15;78(2):313-319. doi: 10.1158/0008-5472.CAN-17-2175. Epub 2018 Jan 8. Review.

5.

Two Distinct Regulatory Mechanisms of Transcriptional Initiation in Response to Nutrient Signaling.

Ferdoush J, Sen R, Kaja A, Barman P, Bhaumik SR.

Genetics. 2018 Jan;208(1):191-205. doi: 10.1534/genetics.117.300518. Epub 2017 Nov 15.

6.

Ubiquitin-Proteasome System Regulation of an Evolutionarily Conserved RNA Polymerase II-Associated Factor 1 Involved in Pancreatic Oncogenesis.

Ferdoush J, Karmakar S, Barman P, Kaja A, Uprety B, Batra SK, Bhaumik SR.

Biochemistry. 2017 Nov 21;56(46):6083-6086. doi: 10.1021/acs.biochem.7b00865. Epub 2017 Oct 19.

PMID:
29023102
7.

Correction for Sen et al., "Fine-Tuning of FACT by the Ubiquitin Proteasome System in Regulation of Transcriptional Elongation".

Sen R, Ferdoush J, Kaja A, Bhaumik SR.

Mol Cell Biol. 2017 Jun 29;37(14). pii: e00281-17. doi: 10.1128/MCB.00281-17. Print 2017 Jul 15. No abstract available.

8.

An mRNA Capping Enzyme Targets FACT to the Active Gene To Enhance the Engagement of RNA Polymerase II into Transcriptional Elongation.

Sen R, Kaja A, Ferdoush J, Lahudkar S, Barman P, Bhaumik SR.

Mol Cell Biol. 2017 Jun 15;37(13). pii: e00029-17. doi: 10.1128/MCB.00029-17. Print 2017 Jul 1.

9.

Fine-Tuning of FACT by the Ubiquitin Proteasome System in Regulation of Transcriptional Elongation.

Sen R, Ferdoush J, Kaja A, Bhaumik SR.

Mol Cell Biol. 2016 May 16;36(11):1691-703. doi: 10.1128/MCB.01112-15. Print 2016 Jun 1. Erratum in: Mol Cell Biol. 2017 Jun 29;37(14 ):.

10.

Regulation of Antisense Transcription by NuA4 Histone Acetyltransferase and Other Chromatin Regulatory Factors.

Uprety B, Kaja A, Ferdoush J, Sen R, Bhaumik SR.

Mol Cell Biol. 2016 Jan 11;36(6):992-1006. doi: 10.1128/MCB.00808-15.

11.

Eaf1p Is Required for Recruitment of NuA4 in Targeting TFIID to the Promoters of the Ribosomal Protein Genes for Transcriptional Initiation In Vivo.

Uprety B, Sen R, Bhaumik SR.

Mol Cell Biol. 2015 Sep 1;35(17):2947-64. doi: 10.1128/MCB.01524-14. Epub 2015 Jun 22.

12.

Regulation of active genome integrity and expression by Rad26p.

Malik S, Bhaumik SR.

Nucleus. 2014;5(6):520-6. doi: 10.4161/nucl.36230. Epub 2014 Oct 31. Review.

13.

Rrd1p, an RNA polymerase II-specific prolyl isomerase and activator of phosphoprotein phosphatase, promotes transcription independently of rapamycin response.

Sen R, Malik S, Frankland-Searby S, Uprety B, Lahudkar S, Bhaumik SR.

Nucleic Acids Res. 2014 Sep;42(15):9892-907. doi: 10.1093/nar/gku703. Epub 2014 Aug 11.

14.

Sus1p facilitates pre-initiation complex formation at the SAGA-regulated genes independently of histone H2B de-ubiquitylation.

Durairaj G, Sen R, Uprety B, Shukla A, Bhaumik SR.

J Mol Biol. 2014 Aug 12;426(16):2928-2941. doi: 10.1016/j.jmb.2014.05.028. Epub 2014 Jun 6.

15.

A new regulatory pathway of mRNA export by an F-box protein, Mdm30.

Durairaj G, Lahudkar S, Bhaumik SR.

RNA. 2014 Feb;20(2):133-42. doi: 10.1261/rna.042325.113. Epub 2013 Dec 10.

16.

A novel role for Cet1p mRNA 5'-triphosphatase in promoter proximal accumulation of RNA polymerase II in Saccharomyces cerevisiase.

Lahudkar S, Durairaj G, Uprety B, Bhaumik SR.

Genetics. 2014 Jan;196(1):161-76. doi: 10.1534/genetics.113.158535. Epub 2013 Oct 30.

17.

Transcriptional stimulatory and repressive functions of histone H2B ubiquitin ligase.

Sen R, Bhaumik SR.

Transcription. 2013 Sep-Dec;4(5):221-6. No abstract available.

PMID:
24135701
18.

Mechanisms of antisense transcription initiation from the 3' end of the GAL10 coding sequence in vivo.

Malik S, Durairaj G, Bhaumik SR.

Mol Cell Biol. 2013 Sep;33(18):3549-67. doi: 10.1128/MCB.01715-12. Epub 2013 Jul 8.

19.

Functional analysis of Bre1p, an E3 ligase for histone H2B ubiquitylation, in regulation of RNA polymerase II association with active genes and transcription in vivo.

Sen R, Lahudkar S, Durairaj G, Bhaumik SR.

J Biol Chem. 2013 Apr 5;288(14):9619-33. doi: 10.1074/jbc.M113.450403. Epub 2013 Feb 15.

20.

Functional analysis of Rad14p, a DNA damage recognition factor in nucleotide excision repair, in regulation of transcription in vivo.

Chaurasia P, Sen R, Bhaumik SR.

J Biol Chem. 2013 Jan 11;288(2):793-806. doi: 10.1074/jbc.M112.413716. Epub 2012 Nov 27.

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