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Items: 1 to 20 of 22


A high-quality genome assembly from a single, field-collected spotted lanternfly (Lycorma delicatula) using the PacBio Sequel II system.

Kingan SB, Urban J, Lambert CC, Baybayan P, Childers AK, Coates B, Scheffler B, Hackett K, Korlach J, Geib SM.

Gigascience. 2019 Oct 1;8(10). pii: giz122. doi: 10.1093/gigascience/giz122.


A High-Quality De novo Genome Assembly from a Single Mosquito Using PacBio Sequencing.

Kingan SB, Heaton H, Cudini J, Lambert CC, Baybayan P, Galvin BD, Durbin R, Korlach J, Lawniczak MKN.

Genes (Basel). 2019 Jan 18;10(1). pii: E62. doi: 10.3390/genes10010062.


Chromosome-level assembly of the water buffalo genome surpasses human and goat genomes in sequence contiguity.

Low WY, Tearle R, Bickhart DM, Rosen BD, Kingan SB, Swale T, Thibaud-Nissen F, Murphy TD, Young R, Lefevre L, Hume DA, Collins A, Ajmone-Marsan P, Smith TPL, Williams JL.

Nat Commun. 2019 Jan 16;10(1):260. doi: 10.1038/s41467-018-08260-0.


Gene flow mediates the role of sex chromosome meiotic drive during complex speciation.

Meiklejohn CD, Landeen EL, Gordon KE, Rzatkiewicz T, Kingan SB, Geneva AJ, Vedanayagam JP, Muirhead CA, Garrigan D, Stern DL, Presgraves DC.

Elife. 2018 Dec 13;7. pii: e35468. doi: 10.7554/eLife.35468.


Improved reference genome of Aedes aegypti informs arbovirus vector control.

Matthews BJ, Dudchenko O, Kingan SB, Koren S, Antoshechkin I, Crawford JE, Glassford WJ, Herre M, Redmond SN, Rose NH, Weedall GD, Wu Y, Batra SS, Brito-Sierra CA, Buckingham SD, Campbell CL, Chan S, Cox E, Evans BR, Fansiri T, Filipović I, Fontaine A, Gloria-Soria A, Hall R, Joardar VS, Jones AK, Kay RGG, Kodali VK, Lee J, Lycett GJ, Mitchell SN, Muehling J, Murphy MR, Omer AD, Partridge FA, Peluso P, Aiden AP, Ramasamy V, Rašić G, Roy S, Saavedra-Rodriguez K, Sharan S, Sharma A, Smith ML, Turner J, Weakley AM, Zhao Z, Akbari OS, Black WC 4th, Cao H, Darby AC, Hill CA, Johnston JS, Murphy TD, Raikhel AS, Sattelle DB, Sharakhov IV, White BJ, Zhao L, Aiden EL, Mann RS, Lambrechts L, Powell JR, Sharakhova MV, Tu Z, Robertson HM, McBride CS, Hastie AR, Korlach J, Neafsey DE, Phillippy AM, Vosshall LB.

Nature. 2018 Nov;563(7732):501-507. doi: 10.1038/s41586-018-0692-z. Epub 2018 Nov 14.


De novo assembly of haplotype-resolved genomes with trio binning.

Koren S, Rhie A, Walenz BP, Dilthey AT, Bickhart DM, Kingan SB, Hiendleder S, Williams JL, Smith TPL, Phillippy AM.

Nat Biotechnol. 2018 Oct 22. doi: 10.1038/nbt.4277. [Epub ahead of print]


Molecular Evolution at a Meiosis Gene Mediates Species Differences in the Rate and Patterning of Recombination.

Brand CL, Cattani MV, Kingan SB, Landeen EL, Presgraves DC.

Curr Biol. 2018 Apr 23;28(8):1289-1295.e4. doi: 10.1016/j.cub.2018.02.056. Epub 2018 Mar 29.


De novo PacBio long-read and phased avian genome assemblies correct and add to reference genes generated with intermediate and short reads.

Korlach J, Gedman G, Kingan SB, Chin CS, Howard JT, Audet JN, Cantin L, Jarvis ED.

Gigascience. 2017 Oct 1;6(10):1-16. doi: 10.1093/gigascience/gix085.


Genome Diversity and Divergence in Drosophila mauritiana: Multiple Signatures of Faster X Evolution.

Garrigan D, Kingan SB, Geneva AJ, Vedanayagam JP, Presgraves DC.

Genome Biol Evol. 2015 May 19;7(5):1331. doi: 10.1093/gbe/evv029. No abstract available.


A new method to scan genomes for introgression in a secondary contact model.

Geneva AJ, Muirhead CA, Kingan SB, Garrigan D.

PLoS One. 2015 Apr 14;10(4):e0118621. doi: 10.1371/journal.pone.0118621. eCollection 2015.


Genome diversity and divergence in Drosophila mauritiana: multiple signatures of faster X evolution.

Garrigan D, Kingan SB, Geneva AJ, Vedanayagam JP, Presgraves DC.

Genome Biol Evol. 2014 Sep 4;6(9):2444-58. doi: 10.1093/gbe/evu198. Erratum in: Genome Biol Evol. 2015 May;7(5):1331.


A selective sweep across species boundaries in Drosophila.

Brand CL, Kingan SB, Wu L, Garrigan D.

Mol Biol Evol. 2013 Sep;30(9):2177-86. doi: 10.1093/molbev/mst123. Epub 2013 Jul 3.


Genome sequencing reveals complex speciation in the Drosophila simulans clade.

Garrigan D, Kingan SB, Geneva AJ, Andolfatto P, Clark AG, Thornton KR, Presgraves DC.

Genome Res. 2012 Aug;22(8):1499-511. doi: 10.1101/gr.130922.111. Epub 2012 Apr 13.


Sex chromosome-specific regulation in the Drosophila male germline but little evidence for chromosomal dosage compensation or meiotic inactivation.

Meiklejohn CD, Landeen EL, Cook JM, Kingan SB, Presgraves DC.

PLoS Biol. 2011 Aug;9(8):e1001126. doi: 10.1371/journal.pbio.1001126. Epub 2011 Aug 16.


Recurrent selection on the Winters sex-ratio genes in Drosophila simulans.

Kingan SB, Garrigan D, Hartl DL.

Genetics. 2010 Jan;184(1):253-65. doi: 10.1534/genetics.109.109587. Epub 2009 Nov 6.


Testing for archaic hominin admixture on the X chromosome: model likelihoods for the modern human RRM2P4 region from summaries of genealogical topology under the structured coalescent.

Cox MP, Mendez FL, Karafet TM, Pilkington MM, Kingan SB, Destro-Bisol G, Strassmann BI, Hammer MF.

Genetics. 2008 Jan;178(1):427-37. doi: 10.1534/genetics.107.080432.


Inferring human population sizes, divergence times and rates of gene flow from mitochondrial, X and Y chromosome resequencing data.

Garrigan D, Kingan SB, Pilkington MM, Wilder JA, Cox MP, Soodyall H, Strassmann B, Destro-Bisol G, de Knijff P, Novelletto A, Friedlaender J, Hammer MF.

Genetics. 2007 Dec;177(4):2195-207.


A sex-ratio meiotic drive system in Drosophila simulans. II: an X-linked distorter.

Tao Y, Araripe L, Kingan SB, Ke Y, Xiao H, Hartl DL.

PLoS Biol. 2007 Nov 6;5(11):e293.


Deep haplotype divergence and long-range linkage disequilibrium at xp21.1 provide evidence that humans descend from a structured ancestral population.

Garrigan D, Mobasher Z, Kingan SB, Wilder JA, Hammer MF.

Genetics. 2005 Aug;170(4):1849-56. Epub 2005 Jun 3.


Speciation in birds: genes, geography, and sexual selection.

Edwards SV, Kingan SB, Calkins JD, Balakrishnan CN, Jennings WB, Swanson WJ, Sorenson MD.

Proc Natl Acad Sci U S A. 2005 May 3;102 Suppl 1:6550-7. Epub 2005 Apr 25. Review.

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