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Items: 1 to 20 of 35


Spatial variation in bird pollination and its mitigating effects on the genetic diversity of pollen pools accepted by Camellia japonica trees within a population at a landscape level.

Nakanishi A, Takeuchi T, Ueno S, Nishimura N, Tomaru N.

Heredity (Edinb). 2019 Sep 4. doi: 10.1038/s41437-019-0262-7. [Epub ahead of print]


Scanning RNA-Seq and RAD-Seq approach to develop SNP markers closely linked to MALE STERILITY 1 (MS1) in Cryptomeria japonica D. Don.

Ueno S, Uchiyama K, Moriguchi Y, Ujino-Ihara T, Matsumoto A, Wei FJ, Saito M, Higuchi Y, Futamura N, Kanamori H, Katayose Y, Tsumura Y.

Breed Sci. 2019 Mar;69(1):19-29. doi: 10.1270/jsbbs.17149. Epub 2019 Feb 15.


Fine mapping of the male-sterile genes (MS1, MS2, MS3, and MS4) and development of SNP markers for marker-assisted selection in Japanese cedar (Cryptomeria japonica D. Don).

Hasegawa Y, Ueno S, Matsumoto A, Ujino-Ihara T, Uchiyama K, Totsuka S, Iwai J, Hakamata T, Moriguchi Y.

PLoS One. 2018 Nov 15;13(11):e0206695. doi: 10.1371/journal.pone.0206695. eCollection 2018.


Reduced incompatibility in the production of second generation hybrids between two Magnolia species revealed by Bayesian gene dispersal modeling.

Tamaki I, Tani S, Setsuko S, Ueno S, Wadasaki N, Tomaru N.

Am J Bot. 2017 Oct;104(10):1546-1555. doi: 10.3732/ajb.1700138.


TodoFirGene: Developing Transcriptome Resources for Genetic Analysis of Abies sachalinensis.

Ueno S, Nakamura Y, Kobayashi M, Terashima S, Ishizuka W, Uchiyama K, Tsumura Y, Yano K, Goto S.

Plant Cell Physiol. 2018 Jun 1;59(6):1276-1284. doi: 10.1093/pcp/pcy058.


Comprehensive analysis of small RNAs expressed in developing male strobili of Cryptomeria japonica.

Ujino-Ihara T, Ueno S, Uchiyama K, Futamura N.

PLoS One. 2018 Mar 12;13(3):e0193665. doi: 10.1371/journal.pone.0193665. eCollection 2018.


Application of a simplified method of chloroplast enrichment to small amounts of tissue for chloroplast genome sequencing.

Sakaguchi S, Ueno S, Tsumura Y, Setoguchi H, Ito M, Hattori C, Nozoe S, Takahashi D, Nakamasu R, Sakagami T, Lannuzel G, Fogliani B, Wulff AS, L'Huillier L, Isagi Y.

Appl Plant Sci. 2017 May 8;5(5). pii: apps.1700002. doi: 10.3732/apps.1700002. eCollection 2017 May.


Evidence of intense chromosomal shuffling during conifer evolution.

de Miguel M, Bartholomé J, Ehrenmann F, Murat F, Moriguchi Y, Uchiyama K, Ueno S, Tsumura Y, Lagraulet H, de Maria N, Cabezas JA, Cervera MT, Gion JM, Salse J, Plomion C.

Genome Biol Evol. 2015 Oct;7(10):2799-2809. Epub 2015 Sep 23.


Development of nuclear and chloroplast microsatellite markers for the endangered conifer Callitris sulcata (Cupressaceae).

Sakaguchi S, Lannuzel G, Fogliani B, Wulff AS, L'Huillier L, Kurata S, Ueno S, Isagi Y, Tsumura Y, Ito M.

Appl Plant Sci. 2015 Aug 10;3(8). pii: apps.1500045. doi: 10.3732/apps.1500045. eCollection 2015 Aug.


The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release.

Lesur I, Le Provost G, Bento P, Da Silva C, Leplé JC, Murat F, Ueno S, Bartholomé J, Lalanne C, Ehrenmann F, Noirot C, Burban C, Léger V, Amselem J, Belser C, Quesneville H, Stierschneider M, Fluch S, Feldhahn L, Tarkka M, Herrmann S, Buscot F, Klopp C, Kremer A, Salse J, Aury JM, Plomion C.

BMC Genomics. 2015 Feb 21;16:112. doi: 10.1186/s12864-015-1331-9.


Genetic differentiation and evolutionary adaptation in Cryptomeria japonica.

Tsumura Y, Uchiyama K, Moriguchi Y, Kimura MK, Ueno S, Ujino-Ihara T.

G3 (Bethesda). 2014 Oct 14;4(12):2389-402. doi: 10.1534/g3.114.013896.


Genetic differentiation and genetic diversity of Castanopsis (Fagaceae), the dominant tree species in Japanese broadleaved evergreen forests, revealed by analysis of EST-associated microsatellites.

Aoki K, Ueno S, Kamijo T, Setoguchi H, Murakami N, Kato M, Tsumura Y.

PLoS One. 2014 Jan 30;9(1):e87429. doi: 10.1371/journal.pone.0087429. eCollection 2014.


Non-density dependent pollen dispersal of Shorea maxwelliana (Dipterocarpaceae) revealed by a Bayesian mating model based on paternity analysis in two synchronized flowering seasons.

Masuda S, Tani N, Ueno S, Lee SL, Muhammad N, Kondo T, Numata S, Tsumura Y.

PLoS One. 2013 Dec 31;8(12):e82039. doi: 10.1371/journal.pone.0082039. eCollection 2013.


Demonstration of genome-wide association studies for identifying markers for wood property and male strobili traits in Cryptomeria japonica.

Uchiyama K, Iwata H, Moriguchi Y, Ujino-Ihara T, Ueno S, Taguchi Y, Tsubomura M, Mishima K, Iki T, Watanabe A, Futamura N, Shinohara K, Tsumura Y.

PLoS One. 2013 Nov 19;8(11):e79866. doi: 10.1371/journal.pone.0079866. eCollection 2013.


Resilient plant-bird interactions in a volcanic island ecosystem: pollination of Japanese Camellia mediated by the Japanese White-eye.

Abe H, Ueno S, Takahashi T, Tsumura Y, Hasegawa M.

PLoS One. 2013 Apr 30;8(4):e62696. doi: 10.1371/journal.pone.0062696. Print 2013.


Transcriptional profiling of bud dormancy induction and release in oak by next-generation sequencing.

Ueno S, Klopp C, Leplé JC, Derory J, Noirot C, Léger V, Prince E, Kremer A, Plomion C, Le Provost G.

BMC Genomics. 2013 Apr 10;14:236. doi: 10.1186/1471-2164-14-236.


Nuclear and chloroplast DNA phylogeography reveals Pleistocene divergence and subsequent secondary contact of two genetic lineages of the tropical rainforest tree species Shorea leprosula (Dipterocarpaceae) in South-East Asia.

Ohtani M, Kondo T, Tani N, Ueno S, Lee LS, Ng KK, Muhammad N, Finkeldey R, Na'iem M, Indrioko S, Kamiya K, Harada K, Diway B, Khoo E, Kawamura K, Tsumura Y.

Mol Ecol. 2013 Apr;22(8):2264-79. doi: 10.1111/mec.12243. Epub 2013 Feb 21.


A second generation framework for the analysis of microsatellites in expressed sequence tags and the development of EST-SSR markers for a conifer, Cryptomeria japonica.

Ueno S, Moriguchi Y, Uchiyama K, Ujino-Ihara T, Futamura N, Sakurai T, Shinohara K, Tsumura Y.

BMC Genomics. 2012 Apr 16;13:136. doi: 10.1186/1471-2164-13-136.


The construction of a high-density linkage map for identifying SNP markers that are tightly linked to a nuclear-recessive major gene for male sterility in Cryptomeria japonica D. Don.

Moriguchi Y, Ujino-Ihara T, Uchiyama K, Futamura N, Saito M, Ueno S, Matsumoto A, Tani N, Taira H, Shinohara K, Tsumura Y.

BMC Genomics. 2012 Mar 16;13:95. doi: 10.1186/1471-2164-13-95.

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