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Items: 10

1.

Web Application for Quantification of Traumatic Brain Injury-Induced Cortical Lesions in Adult Mice.

Ciszek R, Andrade P, Tapiala J, Pitkänen A, Ndode-Ekane XE.

Neuroinformatics. 2019 Dec 4. doi: 10.1007/s12021-019-09444-9. [Epub ahead of print]

PMID:
31802356
2.

In Vitro and In Vivo Pipeline for Validation of Disease-Modifying Effects of Systems Biology-Derived Network Treatments for Traumatic Brain Injury-Lessons Learned.

Lipponen A, Natunen T, Hujo M, Ciszek R, Hämäläinen E, Tohka J, Hiltunen M, Paananen J, Poulsen D, Kansanen E, Ekolle Ndode-Ekane X, Levonen AL, Pitkänen A.

Int J Mol Sci. 2019 Oct 29;20(21). pii: E5395. doi: 10.3390/ijms20215395.

3.

Harmonization of the pipeline for seizure detection to phenotype post-traumatic epilepsy in a preclinical multicenter study on post-traumatic epileptogenesis.

Casillas-Espinosa PM, Andrade P, Santana-Gomez C, Paananen T, Smith G, Ali I, Ciszek R, Ndode-Ekane XE, Brady RD, Tohka J, Hudson MR, Perucca P, Braine EL, Immonen R, Puhakka N, Shultz SR, Jones NC, Staba RJ, Pitkänen A, O'Brien TJ.

Epilepsy Res. 2019 Oct;156:106131. doi: 10.1016/j.eplepsyres.2019.04.011. Epub 2019 Apr 27.

PMID:
31076256
4.

Harmonization of pipeline for detection of HFOs in a rat model of post-traumatic epilepsy in preclinical multicenter study on post-traumatic epileptogenesis.

Santana-Gomez C, Andrade P, Hudson MR, Paananen T, Ciszek R, Smith G, Ali I, Rundle BK, Ndode-Ekane XE, Casillas-Espinosa PM, Immonen R, Puhakka N, Jones N, Brady RD, Perucca P, Shultz SR, Pitkänen A, O'Brien TJ, Staba R.

Epilepsy Res. 2019 Oct;156:106110. doi: 10.1016/j.eplepsyres.2019.03.008. Epub 2019 Mar 15.

PMID:
30981541
5.

Informatics tools to assess the success of procedural harmonization in preclinical multicenter biomarker discovery study on post-traumatic epileptogenesis.

Ciszek R, Ndode-Ekane XE, Gomez CS, Casillas-Espinosa PM, Ali I, Smith G, Puhakka N, Lapinlampi N, Andrade P, Kamnaksh A, Immonen R, Paananen T, Hudson MR, Brady RD, Shultz SR, O'Brien TJ, Staba RJ, Tohka J, Pitkänen A.

Epilepsy Res. 2019 Feb;150:17-26. doi: 10.1016/j.eplepsyres.2018.12.010. Epub 2018 Dec 27.

PMID:
30605864
6.

Acute Non-Convulsive Status Epilepticus after Experimental Traumatic Brain Injury in Rats.

Andrade P, Banuelos-Cabrera I, Lapinlampi N, Paananen T, Ciszek R, Ndode-Ekane XE, Pitkänen A.

J Neurotrauma. 2019 Jun;36(11):1890-1907. doi: 10.1089/neu.2018.6107. Epub 2019 Feb 25.

PMID:
30543155
7.

A web-based application for generating 2D-unfolded cortical maps to analyze the location and extent of cortical lesions following traumatic brain injury in adult rats.

Andrade P, Ciszek R, Pitkänen A, Ndode-Ekane XE.

J Neurosci Methods. 2018 Oct 1;308:330-336. doi: 10.1016/j.jneumeth.2018.08.028. Epub 2018 Sep 5.

PMID:
30194043
8.

Algorithm for automatic detection of spontaneous seizures in rats with post-traumatic epilepsy.

Andrade P, Paananen T, Ciszek R, Lapinlampi N, Pitkänen A.

J Neurosci Methods. 2018 Sep 1;307:37-45. doi: 10.1016/j.jneumeth.2018.06.015. Epub 2018 Jun 21.

PMID:
29936072
9.

On-line detection of Escherichia coli intrusion in a pilot-scale drinking water distribution system.

Ikonen J, Pitkänen T, Kosse P, Ciszek R, Kolehmainen M, Miettinen IT.

J Environ Manage. 2017 Aug 1;198(Pt 1):384-392. doi: 10.1016/j.jenvman.2017.04.090. Epub 2017 May 8.

PMID:
28494427
10.

Varietas: a functional variation database portal.

Paananen J, Ciszek R, Wong G.

Database (Oxford). 2010 Jul 29;2010:baq016. doi: 10.1093/database/baq016.

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