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Items: 1 to 20 of 51

1.

Kti12, a PSTK-like tRNA dependent ATPase essential for tRNA modification by Elongator.

Krutyhołowa R, Hammermeister A, Zabel R, Abdel-Fattah W, Reinhardt-Tews A, Helm M, Stark MJR, Breunig KD, Schaffrath R, Glatt S.

Nucleic Acids Res. 2019 May 21;47(9):4814-4830. doi: 10.1093/nar/gkz190.

2.

Absolute Quantification of Noncoding RNA by Microscale Thermophoresis.

Jacob D, Thüring K, Galliot A, Marchand V, Galvanin A, Ciftci A, Scharmann K, Stock M, Roignant JY, Leidel SA, Motorin Y, Schaffrath R, Klassen R, Helm M.

Angew Chem Int Ed Engl. 2019 Mar 20. doi: 10.1002/anie.201814377. [Epub ahead of print]

PMID:
30892798
3.

Roles of Elongator Dependent tRNA Modification Pathways in Neurodegeneration and Cancer.

Hawer H, Hammermeister A, Ravichandran KE, Glatt S, Schaffrath R, Klassen R.

Genes (Basel). 2018 Dec 28;10(1). pii: E19. doi: 10.3390/genes10010019. Review.

4.

Unfolded Protein Response Suppression in Yeast by Loss of tRNA Modifications.

Bruch A, Klassen R, Schaffrath R.

Genes (Basel). 2018 Oct 23;9(11). pii: E516. doi: 10.3390/genes9110516.

5.

Importance of diphthamide modified EF2 for translational accuracy and competitive cell growth in yeast.

Hawer H, Ütkür K, Arend M, Mayer K, Adrian L, Brinkmann U, Schaffrath R.

PLoS One. 2018 Oct 18;13(10):e0205870. doi: 10.1371/journal.pone.0205870. eCollection 2018.

6.

Collaboration of tRNA modifications and elongation factor eEF1A in decoding and nonsense suppression.

Klassen R, Schaffrath R.

Sci Rep. 2018 Aug 24;8(1):12749. doi: 10.1038/s41598-018-31158-2.

7.

Protein Phosphatase Sit4 Affects Lipid Droplet Synthesis and Soraphen A Resistance Independent of Its Role in Regulating Elongator Dependent tRNA Modification.

Bozaquel-Morais BL, Vogt L, D'Angelo V, Schaffrath R, Klassen R, Montero-Lomelí M.

Biomolecules. 2018 Jul 11;8(3). pii: E49. doi: 10.3390/biom8030049.

8.

Positioning Europe for the EPITRANSCRIPTOMICS challenge.

Jantsch MF, Quattrone A, O'Connell M, Helm M, Frye M, Macias-Gonzales M, Ohman M, Ameres S, Willems L, Fuks F, Oulas A, Vanacova S, Nielsen H, Bousquet-Antonelli C, Motorin Y, Roignant JY, Balatsos N, Dinnyes A, Baranov P, Kelly V, Lamm A, Rechavi G, Pelizzola M, Liepins J, Holodnuka Kholodnyuk I, Zammit V, Ayers D, Drablos F, Dahl JA, Bujnicki J, Jeronimo C, Almeida R, Neagu M, Costache M, Bankovic J, Banovic B, Kyselovic J, Valor LM, Selbert S, Pir P, Demircan T, Cowling V, Schäfer M, Rossmanith W, Lafontaine D, David A, Carre C, Lyko F, Schaffrath R, Schwartz S, Verdel A, Klungland A, Purta E, Timotijevic G, Cardona F, Davalos A, Ballana E, O Carroll D, Ule J, Fray R.

RNA Biol. 2018;15(6):829-831. doi: 10.1080/15476286.2018.1460996. Epub 2018 May 9.

9.

Guidelines and recommendations on yeast cell death nomenclature.

Carmona-Gutierrez D, Bauer MA, Zimmermann A, Aguilera A, Austriaco N, Ayscough K, Balzan R, Bar-Nun S, Barrientos A, Belenky P, Blondel M, Braun RJ, Breitenbach M, Burhans WC, Büttner S, Cavalieri D, Chang M, Cooper KF, Côrte-Real M, Costa V, Cullin C, Dawes I, Dengjel J, Dickman MB, Eisenberg T, Fahrenkrog B, Fasel N, Fröhlich KU, Gargouri A, Giannattasio S, Goffrini P, Gourlay CW, Grant CM, Greenwood MT, Guaragnella N, Heger T, Heinisch J, Herker E, Herrmann JM, Hofer S, Jiménez-Ruiz A, Jungwirth H, Kainz K, Kontoyiannis DP, Ludovico P, Manon S, Martegani E, Mazzoni C, Megeney LA, Meisinger C, Nielsen J, Nyström T, Osiewacz HD, Outeiro TF, Park HO, Pendl T, Petranovic D, Picot S, Polčic P, Powers T, Ramsdale M, Rinnerthaler M, Rockenfeller P, Ruckenstuhl C, Schaffrath R, Segovia M, Severin FF, Sharon A, Sigrist SJ, Sommer-Ruck C, Sousa MJ, Thevelein JM, Thevissen K, Titorenko V, Toledano MB, Tuite M, Vögtle FN, Westermann B, Winderickx J, Wissing S, Wölfl S, Zhang ZJ, Zhao RY, Zhou B, Galluzzi L, Kroemer G, Madeo F.

Microb Cell. 2018 Jan 1;5(1):4-31. doi: 10.15698/mic2018.01.607. Review.

10.

Cooperativity between different tRNA modifications and their modification pathways.

Sokołowski M, Klassen R, Bruch A, Schaffrath R, Glatt S.

Biochim Biophys Acta Gene Regul Mech. 2018 Apr;1861(4):409-418. doi: 10.1016/j.bbagrm.2017.12.003. Epub 2017 Dec 5. Review.

PMID:
29222069
11.

Use of a Yeast tRNase Killer Toxin to Diagnose Kti12 Motifs Required for tRNA Modification by Elongator.

Mehlgarten C, Prochaska H, Hammermeister A, Abdel-Fattah W, Wagner M, Krutyhołowa R, Jun SE, Kim GT, Glatt S, Breunig KD, Stark MJR, Schaffrath R.

Toxins (Basel). 2017 Sep 5;9(9). pii: E272. doi: 10.3390/toxins9090272.

12.

Sulfur transfer and activation by ubiquitin-like modifier system Uba4•Urm1 link protein urmylation and tRNA thiolation in yeast.

Jüdes A, Bruch A, Klassen R, Helm M, Schaffrath R.

Microb Cell. 2016 Oct 24;3(11):554-564. doi: 10.15698/mic2016.11.539.

13.

Combined tRNA modification defects impair protein homeostasis and synthesis of the yeast prion protein Rnq1.

Schaffrath R, Klassen R.

Prion. 2017 Jan 2;11(1):48-53. doi: 10.1080/19336896.2017.1284734.

14.

Wobble uridine modifications-a reason to live, a reason to die?!

Schaffrath R, Leidel SA.

RNA Biol. 2017 Sep 2;14(9):1209-1222. doi: 10.1080/15476286.2017.1295204. Epub 2017 Feb 23. Review.

15.

Role of Pseudouridine Formation by Deg1 for Functionality of Two Glutamine Isoacceptor tRNAs.

Klassen R, Schaffrath R.

Biomolecules. 2017 Jan 26;7(1). pii: E8. doi: 10.3390/biom7010008.

16.

Independent suppression of ribosomal +1 frameshifts by different tRNA anticodon loop modifications.

Klassen R, Bruch A, Schaffrath R.

RNA Biol. 2017 Sep 2;14(9):1252-1259. doi: 10.1080/15476286.2016.1267098. Epub 2016 Dec 12.

17.

Glutaredoxin GRXS17 Associates with the Cytosolic Iron-Sulfur Cluster Assembly Pathway.

Iñigo S, Durand AN, Ritter A, Le Gall S, Termathe M, Klassen R, Tohge T, De Coninck B, Van Leene J, De Clercq R, Cammue BP, Fernie AR, Gevaert K, De Jaeger G, Leidel SA, Schaffrath R, Van Lijsebettens M, Pauwels L, Goossens A.

Plant Physiol. 2016 Oct;172(2):858-873. Epub 2016 Aug 8.

18.

tRNA anticodon loop modifications ensure protein homeostasis and cell morphogenesis in yeast.

Klassen R, Ciftci A, Funk J, Bruch A, Butter F, Schaffrath R.

Nucleic Acids Res. 2016 Dec 15;44(22):10946-10959. Epub 2016 Aug 5.

19.

Autoselection of cytoplasmic yeast virus like elements encoding toxin/antitoxin systems involves a nuclear barrier for immunity gene expression.

Kast A, Voges R, Schroth M, Schaffrath R, Klassen R, Meinhardt F.

PLoS Genet. 2015 May 14;11(5):e1005005. doi: 10.1371/journal.pgen.1005005. eCollection 2015 May.

20.

Urmylation and tRNA thiolation functions of ubiquitin-like Uba4·Urm1 systems are conserved from yeast to man.

Jüdes A, Ebert F, Bär C, Thüring KL, Harrer A, Klassen R, Helm M, Stark MJ, Schaffrath R.

FEBS Lett. 2015 Apr 2;589(8):904-9. doi: 10.1016/j.febslet.2015.02.024. Epub 2015 Mar 3.

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