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IDSSR: An Efficient Pipeline for Identifying Polymorphic Microsatellites from a Single Genome Sequence.

Guang XM, Xia JQ, Lin JQ, Yu J, Wan QH, Fang SG.

Int J Mol Sci. 2019 Jul 16;20(14). pii: E3497. doi: 10.3390/ijms20143497.


Genome resequencing reveals congenital causes of embryo and nestling death in crested ibis (Nipponia nippon).

Fu CZ, Guang XM, Wan QH, Fang SG.

Genome Biol Evol. 2019 Jul 12. pii: evz149. doi: 10.1093/gbe/evz149. [Epub ahead of print]


Male density, a signal for population self-regulation in Alligator sinensis.

Zhao L, Fang LM, Wan QH, Fang SG.

Proc Biol Sci. 2019 Apr 10;286(1900):20190191. doi: 10.1098/rspb.2019.0191.


MHC class I diversity predicts non-random mating in Chinese alligators (Alligator sinensis).

Han QH, Sun RN, Yang HQ, Wang ZW, Wan QH, Fang SG.

Heredity (Edinb). 2019 Jun;122(6):809-818. doi: 10.1038/s41437-018-0177-8. Epub 2019 Jan 22.


Deep Sequencing of Fosmid Clones Indicates Gene Conversion in the Male-Specific Region of the Giant Panda Y Chromosome.

Han FR, Guang XM, Wan QH, Fang SG.

Genome Biol Evol. 2018 Sep 1;10(9):2168-2177. doi: 10.1093/gbe/evy174.


Limited polymorphism of the functional MHC class II B gene in the black-spotted frog (Pelophylax nigromaculatus) identified by locus-specific genotyping.

Liu HY, Xue F, Gong J, Wan QH, Fang SG.

Ecol Evol. 2017 Oct 20;7(23):9860-9868. doi: 10.1002/ece3.3408. eCollection 2017 Dec.


A crucial role of paralogous β-defensin genes in the Chinese alligator innate immune system revealed by the first determination of a Crocodilia defensin cluster.

Tang KY, Wang X, Wan QH, Fang SG.

Dev Comp Immunol. 2018 Apr;81:193-203. doi: 10.1016/j.dci.2017.11.018. Epub 2017 Dec 2.


Historical gene flow and profound spatial genetic structure among golden pheasant populations suggested by multi-locus analysis.

He K, Liu HY, Ge YF, Wu SY, Wan QH.

Mol Phylogenet Evol. 2017 May;110:93-103. doi: 10.1016/j.ympev.2017.03.009. Epub 2017 Mar 7.


Balancing selection and recombination as evolutionary forces caused population genetic variations in golden pheasant MHC class I genes.

Zeng QQ, He K, Sun DD, Ma MY, Ge YF, Fang SG, Wan QH.

BMC Evol Biol. 2016 Feb 18;16:42. doi: 10.1186/s12862-016-0609-0.


Major histocompatibility complex class II genetic variation in forest musk deer (Moschus berezovskii) in China.

Yao G, Zhu Y, Wan QH, Fang SG.

Anim Genet. 2015 Oct;46(5):535-43. doi: 10.1111/age.12336. Epub 2015 Sep 15.


Genomic organization of the crested ibis MHC provides new insight into ancestral avian MHC structure.

Chen LC, Lan H, Sun L, Deng YL, Tang KY, Wan QH.

Sci Rep. 2015 Jan 22;5:7963. doi: 10.1038/srep07963.


The first report of a Pelecaniformes defensin cluster: characterization of β-defensin genes in the crested ibis based on BAC libraries.

Lan H, Chen H, Chen LC, Wang BB, Sun L, Ma MY, Fang SG, Wan QH.

Sci Rep. 2014 Nov 5;4:6923. doi: 10.1038/srep06923.


Patterns of genetic differentiation at MHC class I genes and microsatellites identify conservation units in the giant panda.

Zhu Y, Wan QH, Yu B, Ge YF, Fang SG.

BMC Evol Biol. 2013 Oct 22;13:227. doi: 10.1186/1471-2148-13-227.


MHC class II β genes in the endangered Hainan Eld's deer (Cervus eldi hainanus).

Liu HY, Xue F, Wan QH, Ge YF.

J Hered. 2013 Nov-Dec;104(6):874-80. doi: 10.1093/jhered/est062. Epub 2013 Sep 27.


Genome analysis and signature discovery for diving and sensory properties of the endangered Chinese alligator.

Wan QH, Pan SK, Hu L, Zhu Y, Xu PW, Xia JQ, Chen H, He GY, He J, Ni XW, Hou HL, Liao SG, Yang HQ, Chen Y, Gao SK, Ge YF, Cao CC, Li PF, Fang LM, Liao L, Zhang S, Wang MZ, Dong W, Fang SG.

Cell Res. 2013 Sep;23(9):1091-105. doi: 10.1038/cr.2013.104. Epub 2013 Aug 6.


Patterns of adaptive and neutral diversity identify the Xiaoxiangling mountains as a refuge for the giant panda.

Chen YY, Zhu Y, Wan QH, Lou JK, Li WJ, Ge YF, Fang SG.

PLoS One. 2013 Jul 19;8(7):e70229. doi: 10.1371/journal.pone.0070229. Print 2013.


Molecular characterization of the major histocompatibility complex class Ia gene in the black-spotted frog, Pelophylax nigromaculata.

Gong J, Sun QP, Xue F, Fang SG, Wan QH.

Biochem Genet. 2013 Dec;51(11-12):876-88. doi: 10.1007/s10528-013-9614-9. Epub 2013 Jul 9.


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