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Items: 1 to 20 of 118

1.

A heritable subset of the core rumen microbiome dictates dairy cow productivity and emissions.

Wallace RJ, Sasson G, Garnsworthy PC, Tapio I, Gregson E, Bani P, Huhtanen P, Bayat AR, Strozzi F, Biscarini F, Snelling TJ, Saunders N, Potterton SL, Craigon J, Minuti A, Trevisi E, Callegari ML, Cappelli FP, Cabezas-Garcia EH, Vilkki J, Pinares-Patino C, Fliegerová KO, Mrázek J, Sechovcová H, Kopečný J, Bonin A, Boyer F, Taberlet P, Kokou F, Halperin E, Williams JL, Shingfield KJ, Mizrahi I.

Sci Adv. 2019 Jul 3;5(7):eaav8391. doi: 10.1126/sciadv.aav8391. eCollection 2019 Jul.

2.

DNA metabarcoding-Need for robust experimental designs to draw sound ecological conclusions.

Zinger L, Bonin A, Alsos IG, Bálint M, Bik H, Boyer F, Chariton AA, Creer S, Coissac E, Deagle BE, De Barba M, Dickie IA, Dumbrell AJ, Ficetola GF, Fierer N, Fumagalli L, Gilbert MTP, Jarman S, Jumpponen A, Kauserud H, Orlando L, Pansu J, Pawlowski J, Tedersoo L, Thomsen PF, Willerslev E, Taberlet P.

Mol Ecol. 2019 Apr;28(8):1857-1862. doi: 10.1111/mec.15060. Epub 2019 Apr 29. No abstract available.

3.

Optimizing environmental DNA sampling effort for fish inventories in tropical streams and rivers.

Cantera I, Cilleros K, Valentini A, Cerdan A, Dejean T, Iribar A, Taberlet P, Vigouroux R, Brosse S.

Sci Rep. 2019 Feb 28;9(1):3085. doi: 10.1038/s41598-019-39399-5.

4.

Body size determines soil community assembly in a tropical forest.

Zinger L, Taberlet P, Schimann H, Bonin A, Boyer F, De Barba M, Gaucher P, Gielly L, Giguet-Covex C, Iribar A, Réjou-Méchain M, Rayé G, Rioux D, Schilling V, Tymen B, Viers J, Zouiten C, Thuiller W, Coissac E, Chave J.

Mol Ecol. 2019 Feb;28(3):528-543. doi: 10.1111/mec.14919. Epub 2018 Nov 22.

PMID:
30375061
5.

Environmental DNA Time Series in Ecology.

Bálint M, Pfenninger M, Grossart HP, Taberlet P, Vellend M, Leibold MA, Englund G, Bowler D.

Trends Ecol Evol. 2018 Dec;33(12):945-957. doi: 10.1016/j.tree.2018.09.003. Epub 2018 Oct 9. Review.

PMID:
30314916
6.

Mapping the imprint of biotic interactions on β-diversity.

Ohlmann M, Mazel F, Chalmandrier L, Bec S, Coissac E, Gielly L, Pansu J, Schilling V, Taberlet P, Zinger L, Chave J, Thuiller W.

Ecol Lett. 2018 Nov;21(11):1660-1669. doi: 10.1111/ele.13143. Epub 2018 Aug 28.

PMID:
30152092
7.

Howling from the past: historical phylogeography and diversity losses in European grey wolves.

Dufresnes C, Miquel C, Remollino N, Biollaz F, Salamin N, Taberlet P, Fumagalli L.

Proc Biol Sci. 2018 Aug 1;285(1884). pii: 20181148. doi: 10.1098/rspb.2018.1148.

PMID:
30068681
8.

Diet shifts by adult flightless dung beetles Circellium bacchus, revealed using DNA metabarcoding, reflect complex life histories.

Kerley GIH, Landman M, Ficetola GF, Boyer F, Bonin A, Rioux D, Taberlet P, Coissac E.

Oecologia. 2018 Sep;188(1):107-115. doi: 10.1007/s00442-018-4203-6. Epub 2018 Jun 30.

PMID:
29961180
9.

Unlocking biodiversity and conservation studies in high-diversity environments using environmental DNA (eDNA): A test with Guianese freshwater fishes.

Cilleros K, Valentini A, Allard L, Dejean T, Etienne R, Grenouillet G, Iribar A, Taberlet P, Vigouroux R, Brosse S.

Mol Ecol Resour. 2019 Jan;19(1):27-46. doi: 10.1111/1755-0998.12900. Epub 2018 Jun 5.

PMID:
29768738
10.

DNA from lake sediments reveals long-term ecosystem changes after a biological invasion.

Ficetola GF, Poulenard J, Sabatier P, Messager E, Gielly L, Leloup A, Etienne D, Bakke J, Malet E, Fanget B, Støren E, Reyss JL, Taberlet P, Arnaud F.

Sci Adv. 2018 May 9;4(5):eaar4292. doi: 10.1126/sciadv.aar4292. eCollection 2018 May.

11.

Convergent genomic signatures of domestication in sheep and goats.

Alberto FJ, Boyer F, Orozco-terWengel P, Streeter I, Servin B, de Villemereuil P, Benjelloun B, Librado P, Biscarini F, Colli L, Barbato M, Zamani W, Alberti A, Engelen S, Stella A, Joost S, Ajmone-Marsan P, Negrini R, Orlando L, Rezaei HR, Naderi S, Clarke L, Flicek P, Wincker P, Coissac E, Kijas J, Tosser-Klopp G, Chikhi A, Bruford MW, Taberlet P, Pompanon F.

Nat Commun. 2018 Mar 6;9(1):813. doi: 10.1038/s41467-018-03206-y.

12.

Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds.

Naval-Sanchez M, Nguyen Q, McWilliam S, Porto-Neto LR, Tellam R, Vuocolo T, Reverter A, Perez-Enciso M, Brauning R, Clarke S, McCulloch A, Zamani W, Naderi S, Rezaei HR, Pompanon F, Taberlet P, Worley KC, Gibbs RA, Muzny DM, Jhangiani SN, Cockett N, Daetwyler H, Kijas J.

Nat Commun. 2018 Feb 28;9(1):859. doi: 10.1038/s41467-017-02809-1.

13.

Lack of evidence for selection favouring MHC haplotypes that combine high functional diversity.

Gaigher A, Roulin A, Gharib WH, Taberlet P, Burri R, Fumagalli L.

Heredity (Edinb). 2018 May;120(5):396-406. doi: 10.1038/s41437-017-0047-9. Epub 2018 Jan 24.

14.

Ancient environmental DNA reveals shifts in dominant mutualisms during the late Quaternary.

Zobel M, Davison J, Edwards ME, Brochmann C, Coissac E, Taberlet P, Willerslev E, Moora M.

Nat Commun. 2018 Jan 10;9(1):139. doi: 10.1038/s41467-017-02421-3.

15.

Evaluating the impact of domestication and captivity on the horse gut microbiome.

Metcalf JL, Song SJ, Morton JT, Weiss S, Seguin-Orlando A, Joly F, Feh C, Taberlet P, Coissac E, Amir A, Willerslev E, Knight R, McKenzie V, Orlando L.

Sci Rep. 2017 Nov 14;7(1):15497. doi: 10.1038/s41598-017-15375-9.

16.

Spatio-temporal monitoring of deep-sea communities using metabarcoding of sediment DNA and RNA.

Guardiola M, Wangensteen OS, Taberlet P, Coissac E, Uriz MJ, Turon X.

PeerJ. 2016 Dec 21;4:e2807. doi: 10.7717/peerj.2807. eCollection 2016.

17.

Corrigendum to "Evolution and taxonomy of the wild species of the genus Ovis (Mammalia, Artiodactyla, Bovidae)" [Mol. Phylogenet. Evol. 54(2) (2010) 315-326].

Rezaei HR, Naderi S, Chintauan-Marquier IC, Jordan S, Taberlet P, Virk AT, Naghash HR, Rioux D, Kaboli M, Luikart G, Pompanon F.

Mol Phylogenet Evol. 2017 Apr;109:465. doi: 10.1016/j.ympev.2016.11.011. Epub 2016 Nov 27. No abstract available.

PMID:
27899018
18.

Inferring neutral biodiversity parameters using environmental DNA data sets.

Sommeria-Klein G, Zinger L, Taberlet P, Coissac E, Chave J.

Sci Rep. 2016 Oct 20;6:35644. doi: 10.1038/srep35644.

19.

Detection of Invasive Mosquito Vectors Using Environmental DNA (eDNA) from Water Samples.

Schneider J, Valentini A, Dejean T, Montarsi F, Taberlet P, Glaizot O, Fumagalli L.

PLoS One. 2016 Sep 14;11(9):e0162493. doi: 10.1371/journal.pone.0162493. eCollection 2016.

20.

Understanding the evolution of holoparasitic plants: the complete plastid genome of the holoparasite Cytinus hypocistis (Cytinaceae).

Roquet C, Coissac É, Cruaud C, Boleda M, Boyer F, Alberti A, Gielly L, Taberlet P, Thuiller W, Van Es J, Lavergne S.

Ann Bot. 2016 Jul 21. pii: mcw135. [Epub ahead of print]

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