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Long Noncoding RNA: Genomics and Relevance to Physiology.

Kong Y, Lu Z, Liu P, Liu Y, Wang F, Liang EY, Hou FF, Liang M.

Compr Physiol. 2019 Jun 12;9(3):933-946. doi: 10.1002/cphy.c180032.


Exosomal let-7d-3p and miR-30d-5p as diagnostic biomarkers for non-invasive screening of cervical cancer and its precursors.

Zheng M, Hou L, Ma Y, Zhou L, Wang F, Cheng B, Wang W, Lu B, Liu P, Lu W, Lu Y.

Mol Cancer. 2019 Apr 2;18(1):76. doi: 10.1186/s12943-019-0999-x.


DriverML: a machine learning algorithm for identifying driver genes in cancer sequencing studies.

Han Y, Yang J, Qian X, Cheng WC, Liu SH, Hua X, Zhou L, Yang Y, Wu Q, Liu P, Lu Y.

Nucleic Acids Res. 2019 May 7;47(8):e45. doi: 10.1093/nar/gkz096.


Salt-deficient diet exacerbates cystogenesis in ARPKD via epithelial sodium channel (ENaC).

Ilatovskaya DV, Levchenko V, Pavlov TS, Isaeva E, Klemens CA, Johnson J, Liu P, Kriegel AJ, Staruschenko A.

EBioMedicine. 2019 Feb;40:663-674. doi: 10.1016/j.ebiom.2019.01.006. Epub 2019 Feb 8.


Role of DNA De Novo (De)Methylation in the Kidney in Salt-Induced Hypertension.

Liu P, Liu Y, Liu H, Pan X, Li Y, Usa K, Mishra MK, Nie J, Liang M.

Hypertension. 2018 Nov;72(5):1160-1171. doi: 10.1161/HYPERTENSIONAHA.118.11650.


MicroRNA-668 represses MTP18 to preserve mitochondrial dynamics in ischemic acute kidney injury.

Wei Q, Sun H, Song S, Liu Y, Liu P, Livingston MJ, Wang J, Liang M, Mi QS, Huo Y, Nahman NS, Mei C, Dong Z.

J Clin Invest. 2018 Dec 3;128(12):5448-5464. doi: 10.1172/JCI121859. Epub 2018 Nov 12.


Smoker and non-smoker lung adenocarcinoma is characterized by distinct tumor immune microenvironments.

Li X, Li J, Wu P, Zhou L, Lu B, Ying K, Chen E, Lu Y, Liu P.

Oncoimmunology. 2018 Jul 30;7(10):e1494677. doi: 10.1080/2162402X.2018.1494677. eCollection 2018.


MicroRNA-214-3p in the Kidney Contributes to the Development of Hypertension.

Liu Y, Usa K, Wang F, Liu P, Geurts AM, Li J, Williams AM, Regner KR, Kong Y, Liu H, Nie J, Liang M.

J Am Soc Nephrol. 2018 Oct;29(10):2518-2528. doi: 10.1681/ASN.2018020117. Epub 2018 Jul 26.


Circ2Disease: a manually curated database of experimentally validated circRNAs in human disease.

Yao D, Zhang L, Zheng M, Sun X, Lu Y, Liu P.

Sci Rep. 2018 Jul 20;8(1):11018. doi: 10.1038/s41598-018-29360-3.


Stability of global methylation profiles of whole blood and extracted DNA under different storage durations and conditions.

Li Y, Pan X, Roberts ML, Liu P, Kotchen TA, Cowley AW Jr, Mattson DL, Liu Y, Liang M, Kidambi S.

Epigenomics. 2018 Jun;10(6):797-811. doi: 10.2217/epi-2018-0025. Epub 2018 Apr 23.


Transcriptomic analysis reveals inflammatory and metabolic pathways that are regulated by renal perfusion pressure in the outer medulla of Dahl-S rats.

Evans LC, Dayton A, Yang C, Liu P, Kurth T, Ahn KW, Komas S, Stingo FC, Laud PW, Vannucci M, Liang M, Cowley AW Jr.

Physiol Genomics. 2018 Jun 1;50(6):440-447. doi: 10.1152/physiolgenomics.00034.2018. Epub 2018 Mar 30.


A comprehensive evaluation of alignment software for reduced representation bisulfite sequencing data.

Sun X, Han Y, Zhou L, Chen E, Lu B, Liu Y, Pan X, Cowley AW Jr, Liang M, Wu Q, Lu Y, Liu P.

Bioinformatics. 2018 Aug 15;34(16):2715-2723. doi: 10.1093/bioinformatics/bty174.


Urinary Metabolites Associated with Blood Pressure on a Low- or High-Sodium Diet.

Cheng Y, Song H, Pan X, Xue H, Wan Y, Wang T, Tian Z, Hou E, Lanza IR, Liu P, Liu Y, Laud PW, Usa K, He Y, Liang M.

Theranostics. 2018 Feb 5;8(6):1468-1480. doi: 10.7150/thno.22018. eCollection 2018.


Genome-wide map of proximity linkage to renin proximal promoter in rat.

Stodola TJ, Liu P, Liu Y, Vallejos AK, Geurts AM, Greene AS, Liang M.

Physiol Genomics. 2018 May 1;50(5):323-331. doi: 10.1152/physiolgenomics.00132.2017. Epub 2018 Mar 9.


miR-29 contributes to normal endothelial function and can restore it in cardiometabolic disorders.

Widlansky ME, Jensen DM, Wang J, Liu Y, Geurts AM, Kriegel AJ, Liu P, Ying R, Zhang G, Casati M, Chu C, Malik M, Branum A, Tanner MJ, Tyagi S, Usa K, Liang M.

EMBO Mol Med. 2018 Mar;10(3). pii: e8046. doi: 10.15252/emmm.201708046.


Artificial intelligence, physiological genomics, and precision medicine.

Williams AM, Liu Y, Regner KR, Jotterand F, Liu P, Liang M.

Physiol Genomics. 2018 Apr 1;50(4):237-243. doi: 10.1152/physiolgenomics.00119.2017. Epub 2018 Jan 26.


Investigation of the Relationship Between Radiation Dose and Gene Mutations and Fusions in Post-Chernobyl Thyroid Cancer.

Efanov AA, Brenner AV, Bogdanova TI, Kelly LM, Liu P, Little MP, Wald AI, Hatch M, Zurnadzy LY, Nikiforova MN, Drozdovitch V, Leeman-Neill R, Mabuchi K, Tronko MD, Chanock SJ, Nikiforov YE.

J Natl Cancer Inst. 2018 Apr 1;110(4):371-378. doi: 10.1093/jnci/djx209. Erratum in: J Natl Cancer Inst. 2018 Jun 1;110(6):685.


Whole-exome sequencing reveals genetic variants in ERC1 and KCNG4 associated with complete hydatidiform mole in Chinese Han women.

Yu Y, Lu B, Lu W, Li S, Li X, Wang X, Wan X, Chen Y, Feng S, Jia Y, Yang R, Tang F, Li X, Zhang S, Wang X, Wei H, Peng Z, Lu L, Zhong H, Zhao L, Huang Z, Lin L, Shen W, Lu Y, Cao Z, Zou J, Ma Y, Chen X, Tian Q, Lu S, Liu P, Ma D, Xie X, Cheng X.

Oncotarget. 2017 Sep 8;8(43):75264-75271. doi: 10.18632/oncotarget.20769. eCollection 2017 Sep 26.


Atmospheric pressure neutral reionization mass spectrometry for structural analysis.

Liu P, Zhao P, Cooks RG, Chen H.

Chem Sci. 2017 Sep 1;8(9):6499-6507. doi: 10.1039/c7sc01999h. Epub 2017 Jul 21.


MicroRNA-21 regulates peroxisome proliferator-activated receptor alpha, a molecular mechanism of cardiac pathology in Cardiorenal Syndrome Type 4.

Chuppa S, Liang M, Liu P, Liu Y, Casati MC, Cowley AW, Patullo L, Kriegel AJ.

Kidney Int. 2018 Feb;93(2):375-389. doi: 10.1016/j.kint.2017.05.014. Epub 2017 Jul 29.

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