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Items: 19

1.

A miniature inverted-repeat transposable element, AddIn-MITE, located inside a WD40 gene is conserved in Andropogoneae grasses.

Grativol C, Thiebaut F, Sangi S, Montessoro P, Santos WDS, Hemerly AS, Ferreira PCG.

PeerJ. 2019 Jan 11;7:e6080. doi: 10.7717/peerj.6080. eCollection 2019.

2.

Copaifera langsdorffii Novel Putative Long Non-Coding RNAs: Interspecies Conservation Analysis in Adaptive Response to Different Biomes.

Danilevicz MF, Moharana KC, Venancio TM, Franco LO, Cardoso SRS, Cardoso M, Thiebaut F, Hemerly AS, Prosdocimi F, Ferreira PCG.

Noncoding RNA. 2018 Oct 8;4(4). pii: E27. doi: 10.3390/ncrna4040027.

3.

Unraveling Interfaces between Energy Metabolism and Cell Cycle in Plants.

Siqueira JA, Hardoim P, Ferreira PCG, Nunes-Nesi A, Hemerly AS.

Trends Plant Sci. 2018 Aug;23(8):731-747. doi: 10.1016/j.tplants.2018.05.005. Epub 2018 Jun 19. Review.

PMID:
29934041
4.

Roles of Non-Coding RNA in Sugarcane-Microbe Interaction.

Thiebaut F, Rojas CA, Grativol C, Calixto EPDR, Motta MR, Ballesteros HGF, Peixoto B, de Lima BNS, Vieira LM, Walter ME, de Armas EM, Entenza JOP, Lifschitz S, Farinelli L, Hemerly AS, Ferreira PCG.

Noncoding RNA. 2017 Dec 20;3(4). pii: E25. doi: 10.3390/ncrna3040025.

5.

The plant cell cycle: Pre-Replication complex formation and controls.

Brasil JN, Costa CNM, Cabral LM, Ferreira PCG, Hemerly AS.

Genet Mol Biol. 2017;40(1 suppl 1):276-291. doi: 10.1590/1678-4685-GMB-2016-0118. Epub 2017 Mar 16.

6.

Sugarcane transcriptome analysis in response to infection caused by Acidovorax avenae subsp. avenae.

Santa Brigida AB, Rojas CA, Grativol C, de Armas EM, Entenza JO, Thiebaut F, Lima MF, Farrinelli L, Hemerly AS, Lifschitz S, Ferreira PC.

PLoS One. 2016 Dec 9;11(12):e0166473. doi: 10.1371/journal.pone.0166473. eCollection 2016.

7.

AIP1 is a novel Agenet/Tudor domain protein from Arabidopsis that interacts with regulators of DNA replication, transcription and chromatin remodeling.

Brasil JN, Cabral LM, Eloy NB, Primo LM, Barroso-Neto IL, Grangeiro LP, Gonzalez N, Inzé D, Ferreira PC, Hemerly AS.

BMC Plant Biol. 2015 Nov 4;15:270. doi: 10.1186/s12870-015-0641-z.

8.

Drought tolerance conferred to sugarcane by association with Gluconacetobacter diazotrophicus: a transcriptomic view of hormone pathways.

Vargas L, Santa Brígida AB, Mota Filho JP, de Carvalho TG, Rojas CA, Vaneechoutte D, Van Bel M, Farrinelli L, Ferreira PC, Vandepoele K, Hemerly AS.

PLoS One. 2014 Dec 9;9(12):e114744. doi: 10.1371/journal.pone.0114744. eCollection 2014.

9.

Genome-wide identification of microRNA and siRNA responsive to endophytic beneficial diazotrophic bacteria in maize.

Thiebaut F, Rojas CA, Grativol C, Motta MR, Vieira T, Regulski M, Martienssen RA, Farinelli L, Hemerly AS, Ferreira PC.

BMC Genomics. 2014 Sep 6;15:766. doi: 10.1186/1471-2164-15-766.

10.

Carica papaya microRNAs are responsive to Papaya meleira virus infection.

Abreu PM, Gaspar CG, Buss DS, Ventura JA, Ferreira PC, Fernandes PM.

PLoS One. 2014 Jul 29;9(7):e103401. doi: 10.1371/journal.pone.0103401. eCollection 2014.

11.

Overexpression of the anaphase-promoting complex (APC) genes in Nicotiana tabacum promotes increasing biomass accumulation.

de Freitas Lima M, Eloy NB, Bottino MC, Hemerly AS, Ferreira PC.

Mol Biol Rep. 2013 Dec;40(12):7093-102. doi: 10.1007/s11033-013-2832-8. Epub 2013 Nov 1.

PMID:
24178345
12.

SAMBA, a plant-specific anaphase-promoting complex/cyclosome regulator is involved in early development and A-type cyclin stabilization.

Eloy NB, Gonzalez N, Van Leene J, Maleux K, Vanhaeren H, De Milde L, Dhondt S, Vercruysse L, Witters E, Mercier R, Cromer L, Beemster GT, Remaut H, Van Montagu MC, De Jaeger G, Ferreira PC, Inzé D.

Proc Natl Acad Sci U S A. 2012 Aug 21;109(34):13853-8. doi: 10.1073/pnas.1211418109. Epub 2012 Aug 6.

13.

Regulation of miR319 during cold stress in sugarcane.

Thiebaut F, Rojas CA, Almeida KL, Grativol C, Domiciano GC, Lamb CR, Engler Jde A, Hemerly AS, Ferreira PC.

Plant Cell Environ. 2012 Mar;35(3):502-12. doi: 10.1111/j.1365-3040.2011.02430.x. Epub 2011 Oct 24.

14.

The APC/C subunit 10 plays an essential role in cell proliferation during leaf development.

Eloy NB, de Freitas Lima M, Van Damme D, Vanhaeren H, Gonzalez N, De Milde L, Hemerly AS, Beemster GT, Inzé D, Ferreira PC.

Plant J. 2011 Oct;68(2):351-63. doi: 10.1111/j.1365-313X.2011.04691.x. Epub 2011 Aug 8.

15.

Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana.

Van Leene J, Hollunder J, Eeckhout D, Persiau G, Van De Slijke E, Stals H, Van Isterdael G, Verkest A, Neirynck S, Buffel Y, De Bodt S, Maere S, Laukens K, Pharazyn A, Ferreira PC, Eloy N, Renne C, Meyer C, Faure JD, Steinbrenner J, Beynon J, Larkin JC, Van de Peer Y, Hilson P, Kuiper M, De Veylder L, Van Onckelen H, Inzé D, Witters E, De Jaeger G.

Mol Syst Biol. 2010 Aug 10;6:397. doi: 10.1038/msb.2010.53.

16.

Complete genome sequence of the sugarcane nitrogen-fixing endophyte Gluconacetobacter diazotrophicus Pal5.

Bertalan M, Albano R, de Pádua V, Rouws L, Rojas C, Hemerly A, Teixeira K, Schwab S, Araujo J, Oliveira A, França L, Magalhães V, Alquéres S, Cardoso A, Almeida W, Loureiro MM, Nogueira E, Cidade D, Oliveira D, Simão T, Macedo J, Valadão A, Dreschsel M, Freitas F, Vidal M, Guedes H, Rodrigues E, Meneses C, Brioso P, Pozzer L, Figueiredo D, Montano H, Junior J, de Souza Filho G, Martin Quintana Flores V, Ferreira B, Branco A, Gonzalez P, Guillobel H, Lemos M, Seibel L, Macedo J, Alves-Ferreira M, Sachetto-Martins G, Coelho A, Santos E, Amaral G, Neves A, Pacheco AB, Carvalho D, Lery L, Bisch P, Rössle SC, Urményi T, Rael Pereira A, Silva R, Rondinelli E, von Krüger W, Martins O, Baldani JI, Ferreira PC.

BMC Genomics. 2009 Sep 23;10:450. doi: 10.1186/1471-2164-10-450.

17.

ABAP1 is a novel plant Armadillo BTB protein involved in DNA replication and transcription.

Masuda HP, Cabral LM, De Veylder L, Tanurdzic M, de Almeida Engler J, Geelen D, Inzé D, Martienssen RA, Ferreira PC, Hemerly AS.

EMBO J. 2008 Oct 22;27(20):2746-56. doi: 10.1038/emboj.2008.191. Epub 2008 Sep 25.

18.

Protein expression profile of Gluconacetobacter diazotrophicus PAL5, a sugarcane endophytic plant growth-promoting bacterium.

Lery LM, Coelho A, von Kruger WM, Gonçalves MS, Santos MF, Valente RH, Santos EO, Rocha SL, Perales J, Domont GB, Teixeira KR, Bertalan M, Ferreira PC, Bisch PM.

Proteomics. 2008 Apr;8(8):1631-44. doi: 10.1002/pmic.200700912. Erratum in: Proteomics. 2008 Nov;8(22):4833. Bertalan, Marcelo [added]; Ferreira, Paulo C G [added].

PMID:
18340630
19.

The Arabidopsis HOBBIT gene encodes a CDC27 homolog that links the plant cell cycle to progression of cell differentiation.

Blilou I, Frugier F, Folmer S, Serralbo O, Willemsen V, Wolkenfelt H, Eloy NB, Ferreira PC, Weisbeek P, Scheres B.

Genes Dev. 2002 Oct 1;16(19):2566-75.

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