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Items: 1 to 20 of 44

1.

Individual and temporal variation in pathogen load predicts long-term impacts of an emerging infectious disease.

Wells K, Hamede RK, Jones ME, Hohenlohe PA, Storfer A, McCallum HI.

Ecology. 2019 Mar;100(3):e02613. doi: 10.1002/ecy.2613. Epub 2019 Feb 15.

PMID:
30636287
2.

High genomic diversity and candidate genes under selection associated with range expansion in eastern coyote (Canis latrans) populations.

Heppenheimer E, Brzeski KE, Hinton JW, Patterson BR, Rutledge LY, DeCandia AL, Wheeldon T, Fain SR, Hohenlohe PA, Kays R, White BN, Chamberlain MJ, vonHoldt BM.

Ecol Evol. 2018 Dec 4;8(24):12641-12655. doi: 10.1002/ece3.4688. eCollection 2018 Dec.

3.

Population Genomic Analysis of North American Eastern Wolves (Canis lycaon) Supports Their Conservation Priority Status.

Heppenheimer E, Harrigan RJ, Rutledge LY, Koepfli KP, DeCandia AL, Brzeski KE, Benson JF, Wheeldon T, Patterson BR, Kays R, Hohenlohe PA, von Holdt BM.

Genes (Basel). 2018 Dec 4;9(12). pii: E606. doi: 10.3390/genes9120606.

4.

The Genomic Basis of Tumor Regression in Tasmanian Devils (Sarcophilus harrisii).

Margres MJ, Ruiz-Aravena M, Hamede R, Jones ME, Lawrance MF, Hendricks SA, Patton A, Davis BW, Ostrander EA, McCallum H, Hohenlohe PA, Storfer A.

Genome Biol Evol. 2018 Nov 1;10(11):3012-3025. doi: 10.1093/gbe/evy229.

5.

Large-effect loci affect survival in Tasmanian devils (Sarcophilus harrisii) infected with a transmissible cancer.

Margres MJ, Jones ME, Epstein B, Kerlin DH, Comte S, Fox S, Fraik AK, Hendricks SA, Huxtable S, Lachish S, Lazenby B, O'Rourke SM, Stahlke AR, Wiench CG, Hamede R, Schönfeld B, McCallum H, Miller MR, Hohenlohe PA, Storfer A.

Mol Ecol. 2018 Nov;27(21):4189-4199. doi: 10.1111/mec.14853. Epub 2018 Oct 5.

PMID:
30171778
6.

The devil is in the details: Genomics of transmissible cancers in Tasmanian devils.

Storfer A, Hohenlohe PA, Margres MJ, Patton A, Fraik AK, Lawrance M, Ricci LE, Stahlke AR, McCallum HI, Jones ME.

PLoS Pathog. 2018 Aug 2;14(8):e1007098. doi: 10.1371/journal.ppat.1007098. eCollection 2018 Aug. No abstract available.

7.

Natural re-colonization and admixture of wolves (Canis lupus) in the US Pacific Northwest: challenges for the protection and management of rare and endangered taxa.

Hendricks SA, Schweizer RM, Harrigan RJ, Pollinger JP, Paquet PC, Darimont CT, Adams JR, Waits LP, vonHoldt BM, Hohenlohe PA, Wayne RK.

Heredity (Edinb). 2019 Feb;122(2):133-149. doi: 10.1038/s41437-018-0094-x. Epub 2018 Jun 7.

PMID:
29880893
8.

A bioinformatic pipeline for identifying informative SNP panels for parentage assignment from RADseq data.

Andrews KR, Adams JR, Cassirer EF, Plowright RK, Gardner C, Dwire M, Hohenlohe PA, Waits LP.

Mol Ecol Resour. 2018 Nov;18(6):1263-1281. doi: 10.1111/1755-0998.12910. Epub 2018 Jul 9.

PMID:
29870119
9.

Comment on "Whole-genome sequence analysis shows two endemic species of North American wolf are admixtures of the coyote and gray wolf".

Hohenlohe PA, Rutledge LY, Waits LP, Andrews KR, Adams JR, Hinton JW, Nowak RM, Patterson BR, Wydeven AP, Wilson PA, White BN.

Sci Adv. 2017 Jun 7;3(6):e1602250. doi: 10.1126/sciadv.1602250. eCollection 2017 Jun.

10.

Infection of the fittest: devil facial tumour disease has greatest effect on individuals with highest reproductive output.

Wells K, Hamede RK, Kerlin DH, Storfer A, Hohenlohe PA, Jones ME, McCallum HI.

Ecol Lett. 2017 Jun;20(6):770-778. doi: 10.1111/ele.12776. Epub 2017 May 10.

PMID:
28489304
11.

Unbroken: RADseq remains a powerful tool for understanding the genetics of adaptation in natural populations.

Catchen JM, Hohenlohe PA, Bernatchez L, Funk WC, Andrews KR, Allendorf FW.

Mol Ecol Resour. 2017 May;17(3):362-365. doi: 10.1111/1755-0998.12669. Epub 2017 Apr 11.

PMID:
28319339
12.

Vive la résistance: genome-wide selection against introduced alleles in invasive hybrid zones.

Kovach RP, Hand BK, Hohenlohe PA, Cosart TF, Boyer MC, Neville HH, Muhlfeld CC, Amish SJ, Carim K, Narum SR, Lowe WH, Allendorf FW, Luikart G.

Proc Biol Sci. 2016 Nov 30;283(1843). pii: 20161380.

13.
14.

Mixed population genomics support for the central marginal hypothesis across the invasive range of the cane toad (Rhinella marina) in Australia.

Trumbo DR, Epstein B, Hohenlohe PA, Alford RA, Schwarzkopf L, Storfer A.

Mol Ecol. 2016 Sep;25(17):4161-76. doi: 10.1111/mec.13754. Epub 2016 Aug 8.

15.

The ecology of an adaptive radiation of three-spined stickleback from North Uist, Scotland.

Magalhaes IS, D'Agostino D, Hohenlohe PA, MacColl AD.

Mol Ecol. 2016 Sep;25(17):4319-36. doi: 10.1111/mec.13746. Epub 2016 Aug 8.

16.

Conservation genomics of natural and managed populations: building a conceptual and practical framework.

Benestan LM, Ferchaud AL, Hohenlohe PA, Garner BA, Naylor GJ, Baums IB, Schwartz MK, Kelley JL, Luikart G.

Mol Ecol. 2016 Jul;25(13):2967-77. doi: 10.1111/mec.13647. Epub 2016 May 18.

PMID:
27086132
17.

Adaptive divergence despite strong genetic drift: genomic analysis of the evolutionary mechanisms causing genetic differentiation in the island fox (Urocyon littoralis).

Funk WC, Lovich RE, Hohenlohe PA, Hofman CA, Morrison SA, Sillett TS, Ghalambor CK, Maldonado JE, Rick TC, Day MD, Polato NR, Fitzpatrick SW, Coonan TJ, Crooks KR, Dillon A, Garcelon DK, King JL, Boser CL, Gould N, Andelt WF.

Mol Ecol. 2016 May;25(10):2176-94. doi: 10.1111/mec.13605. Epub 2016 Apr 5.

18.

Harnessing the power of RADseq for ecological and evolutionary genomics.

Andrews KR, Good JM, Miller MR, Luikart G, Hohenlohe PA.

Nat Rev Genet. 2016 Feb;17(2):81-92. doi: 10.1038/nrg.2015.28. Epub 2016 Jan 5. Review.

19.

Trait dimensionality explains widespread variation in local adaptation.

MacPherson A, Hohenlohe PA, Nuismer SL.

Proc Biol Sci. 2015 Mar 7;282(1802). pii: 20141570. doi: 10.1098/rspb.2014.1570.

20.

Ecological genomics in full colour.

Hohenlohe PA.

Mol Ecol. 2014 Nov;23(21):5129-31. doi: 10.1111/mec.12945.

PMID:
25330852

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