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Items: 1 to 20 of 49

1.

Population genomics training for the next generation of conservation geneticists: ConGen 2018 Workshop.

Stahlke A, Bell D, Dhendup T, Kern B, Pannoni S, Robinson Z, Strait J, Smith S, Hand BK, Hohenlohe PA, Luikart G.

J Hered. 2020 Feb 10. pii: esaa001. doi: 10.1093/jhered/esaa001. [Epub ahead of print]

PMID:
32037446
2.

Transcriptomics of Tasmanian Devil (Sarcophilus Harrisii) Ear Tissue Reveals Homogeneous Gene Expression Patterns across a Heterogeneous Landscape.

Fraik AK, Quackenbush C, Margres MJ, Comte S, Hamilton DG, Kozakiewicz CP, Jones M, Hamede R, Hohenlohe PA, Storfer A, Kelley JL.

Genes (Basel). 2019 Oct 12;10(10). pii: E801. doi: 10.3390/genes10100801.

3.

Conserving adaptive potential: lessons from Tasmanian devils and their transmissible cancer.

Hohenlohe PA, McCallum HI, Jones ME, Lawrance MF, Hamede RK, Storfer A.

Conserv Genet. 2019 Feb;20(1):81-87. doi: 10.1007/s10592-019-01157-5. Epub 2019 Feb 14.

4.

Tracing the rise of malignant cell lines: Distribution, epidemiology and evolutionary interactions of two transmissible cancers in Tasmanian devils.

James S, Jennings G, Kwon YM, Stammnitz M, Fraik A, Storfer A, Comte S, Pemberton D, Fox S, Brown B, Pye R, Woods G, Lyons B, Hohenlohe PA, McCallum H, Siddle H, Thomas F, Ujvari B, Murchison EP, Jones M, Hamede R.

Evol Appl. 2019 Jun 28;12(9):1772-1780. doi: 10.1111/eva.12831. eCollection 2019 Oct.

5.

Contemporary Demographic Reconstruction Methods Are Robust to Genome Assembly Quality: A Case Study in Tasmanian Devils.

Patton AH, Margres MJ, Stahlke AR, Hendricks S, Lewallen K, Hamede RK, Ruiz-Aravena M, Ryder O, McCallum HI, Jones ME, Hohenlohe PA, Storfer A.

Mol Biol Evol. 2019 Dec 1;36(12):2906-2921. doi: 10.1093/molbev/msz191.

6.

Individual and temporal variation in pathogen load predicts long-term impacts of an emerging infectious disease.

Wells K, Hamede RK, Jones ME, Hohenlohe PA, Storfer A, McCallum HI.

Ecology. 2019 Mar;100(3):e02613. doi: 10.1002/ecy.2613. Epub 2019 Feb 15.

PMID:
30636287
7.

High genomic diversity and candidate genes under selection associated with range expansion in eastern coyote (Canis latrans) populations.

Heppenheimer E, Brzeski KE, Hinton JW, Patterson BR, Rutledge LY, DeCandia AL, Wheeldon T, Fain SR, Hohenlohe PA, Kays R, White BN, Chamberlain MJ, vonHoldt BM.

Ecol Evol. 2018 Dec 4;8(24):12641-12655. doi: 10.1002/ece3.4688. eCollection 2018 Dec.

8.

Population Genomic Analysis of North American Eastern Wolves (Canis lycaon) Supports Their Conservation Priority Status.

Heppenheimer E, Harrigan RJ, Rutledge LY, Koepfli KP, DeCandia AL, Brzeski KE, Benson JF, Wheeldon T, Patterson BR, Kays R, Hohenlohe PA, von Holdt BM.

Genes (Basel). 2018 Dec 4;9(12). pii: E606. doi: 10.3390/genes9120606.

9.

The Genomic Basis of Tumor Regression in Tasmanian Devils (Sarcophilus harrisii).

Margres MJ, Ruiz-Aravena M, Hamede R, Jones ME, Lawrance MF, Hendricks SA, Patton A, Davis BW, Ostrander EA, McCallum H, Hohenlohe PA, Storfer A.

Genome Biol Evol. 2018 Nov 1;10(11):3012-3025. doi: 10.1093/gbe/evy229.

10.

Large-effect loci affect survival in Tasmanian devils (Sarcophilus harrisii) infected with a transmissible cancer.

Margres MJ, Jones ME, Epstein B, Kerlin DH, Comte S, Fox S, Fraik AK, Hendricks SA, Huxtable S, Lachish S, Lazenby B, O'Rourke SM, Stahlke AR, Wiench CG, Hamede R, Schönfeld B, McCallum H, Miller MR, Hohenlohe PA, Storfer A.

Mol Ecol. 2018 Nov;27(21):4189-4199. doi: 10.1111/mec.14853. Epub 2018 Oct 5.

11.

The devil is in the details: Genomics of transmissible cancers in Tasmanian devils.

Storfer A, Hohenlohe PA, Margres MJ, Patton A, Fraik AK, Lawrance M, Ricci LE, Stahlke AR, McCallum HI, Jones ME.

PLoS Pathog. 2018 Aug 2;14(8):e1007098. doi: 10.1371/journal.ppat.1007098. eCollection 2018 Aug. No abstract available.

12.

Natural re-colonization and admixture of wolves (Canis lupus) in the US Pacific Northwest: challenges for the protection and management of rare and endangered taxa.

Hendricks SA, Schweizer RM, Harrigan RJ, Pollinger JP, Paquet PC, Darimont CT, Adams JR, Waits LP, vonHoldt BM, Hohenlohe PA, Wayne RK.

Heredity (Edinb). 2019 Feb;122(2):133-149. doi: 10.1038/s41437-018-0094-x. Epub 2018 Jun 7.

13.

A bioinformatic pipeline for identifying informative SNP panels for parentage assignment from RADseq data.

Andrews KR, Adams JR, Cassirer EF, Plowright RK, Gardner C, Dwire M, Hohenlohe PA, Waits LP.

Mol Ecol Resour. 2018 Nov;18(6):1263-1281. doi: 10.1111/1755-0998.12910. Epub 2018 Jul 9.

14.

Comment on "Whole-genome sequence analysis shows two endemic species of North American wolf are admixtures of the coyote and gray wolf".

Hohenlohe PA, Rutledge LY, Waits LP, Andrews KR, Adams JR, Hinton JW, Nowak RM, Patterson BR, Wydeven AP, Wilson PA, White BN.

Sci Adv. 2017 Jun 7;3(6):e1602250. doi: 10.1126/sciadv.1602250. eCollection 2017 Jun.

15.

Infection of the fittest: devil facial tumour disease has greatest effect on individuals with highest reproductive output.

Wells K, Hamede RK, Kerlin DH, Storfer A, Hohenlohe PA, Jones ME, McCallum HI.

Ecol Lett. 2017 Jun;20(6):770-778. doi: 10.1111/ele.12776. Epub 2017 May 10.

16.

Unbroken: RADseq remains a powerful tool for understanding the genetics of adaptation in natural populations.

Catchen JM, Hohenlohe PA, Bernatchez L, Funk WC, Andrews KR, Allendorf FW.

Mol Ecol Resour. 2017 May;17(3):362-365. doi: 10.1111/1755-0998.12669. Epub 2017 Apr 11.

PMID:
28319339
17.

Vive la résistance: genome-wide selection against introduced alleles in invasive hybrid zones.

Kovach RP, Hand BK, Hohenlohe PA, Cosart TF, Boyer MC, Neville HH, Muhlfeld CC, Amish SJ, Carim K, Narum SR, Lowe WH, Allendorf FW, Luikart G.

Proc Biol Sci. 2016 Nov 30;283(1843). pii: 20161380.

18.
19.

Mixed population genomics support for the central marginal hypothesis across the invasive range of the cane toad (Rhinella marina) in Australia.

Trumbo DR, Epstein B, Hohenlohe PA, Alford RA, Schwarzkopf L, Storfer A.

Mol Ecol. 2016 Sep;25(17):4161-76. doi: 10.1111/mec.13754. Epub 2016 Aug 8.

20.

The ecology of an adaptive radiation of three-spined stickleback from North Uist, Scotland.

Magalhaes IS, D'Agostino D, Hohenlohe PA, MacColl AD.

Mol Ecol. 2016 Sep;25(17):4319-36. doi: 10.1111/mec.13746. Epub 2016 Aug 8.

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