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Items: 1 to 20 of 29


Revisiting the Roles of Tobamovirus Replicase Complex Proteins in Viral Replication and Silencing Suppression.

Malpica-López N, Rajeswaran R, Beknazariants D, Seguin J, Golyaev V, Farinelli L, Pooggin MM.

Mol Plant Microbe Interact. 2017 Nov 15:MPMI07170164R. doi: 10.1094/MPMI-07-17-0164-R. [Epub ahead of print]


RNAi-mediated resistance to viruses: a critical assessment of methodologies.

Pooggin MM.

Curr Opin Virol. 2017 Oct;26:28-35. doi: 10.1016/j.coviro.2017.07.010. Epub 2017 Jul 25. Review.


Emergence of a Latent Indian Cassava Mosaic Virus from Cassava Which Recovered from Infection by a Non-Persistent Sri Lankan Cassava Mosaic Virus.

Karthikeyan C, Patil BL, Borah BK, Resmi TR, Turco S, Pooggin MM, Hohn T, Veluthambi K.

Viruses. 2016 Sep 28;8(10). pii: E264.


Viral protein suppresses oxidative burst and salicylic acid-dependent autophagy and facilitates bacterial growth on virus-infected plants.

Zvereva AS, Golyaev V, Turco S, Gubaeva EG, Rajeswaran R, Schepetilnikov MV, Srour O, Ryabova LA, Boller T, Pooggin MM.

New Phytol. 2016 Aug;211(3):1020-34. doi: 10.1111/nph.13967. Epub 2016 Apr 27.


MISIS-2: A bioinformatics tool for in-depth analysis of small RNAs and representation of consensus master genome in viral quasispecies.

Seguin J, Otten P, Baerlocher L, Farinelli L, Pooggin MM.

J Virol Methods. 2016 Jul;233:37-40. doi: 10.1016/j.jviromet.2016.03.005. Epub 2016 Mar 16.


Field Trial and Molecular Characterization of RNAi-Transgenic Tomato Plants That Exhibit Resistance to Tomato Yellow Leaf Curl Geminivirus.

Fuentes A, Carlos N, Ruiz Y, Callard D, Sánchez Y, Ochagavía ME, Seguin J, Malpica-López N, Hohn T, Lecca MR, Pérez R, Doreste V, Rehrauer H, Farinelli L, Pujol M, Pooggin MM.

Mol Plant Microbe Interact. 2016 Mar;29(3):197-209. doi: 10.1094/MPMI-08-15-0181-R. Epub 2016 Feb 11.


Interactions of Rice tungro bacilliform pararetrovirus and its protein P4 with plant RNA-silencing machinery.

Rajeswaran R, Golyaev V, Seguin J, Zvereva AS, Farinelli L, Pooggin MM.

Mol Plant Microbe Interact. 2014 Dec;27(12):1370-8. doi: 10.1094/MPMI-07-14-0201-R.


Evasion of short interfering RNA-directed antiviral silencing in Musa acuminata persistently infected with six distinct banana streak pararetroviruses.

Rajeswaran R, Seguin J, Chabannes M, Duroy PO, Laboureau N, Farinelli L, Iskra-Caruana ML, Pooggin MM.

J Virol. 2014 Oct;88(19):11516-28. doi: 10.1128/JVI.01496-14. Epub 2014 Jul 23.


De novo reconstruction of consensus master genomes of plant RNA and DNA viruses from siRNAs.

Seguin J, Rajeswaran R, Malpica-López N, Martin RR, Kasschau K, Dolja VV, Otten P, Farinelli L, Pooggin MM.

PLoS One. 2014 Feb 11;9(2):e88513. doi: 10.1371/journal.pone.0088513. eCollection 2014.


MISIS: a bioinformatics tool to view and analyze maps of small RNAs derived from viruses and genomic loci generating multiple small RNAs.

Seguin J, Otten P, Baerlocher L, Farinelli L, Pooggin MM.

J Virol Methods. 2014 Jan;195:120-2. doi: 10.1016/j.jviromet.2013.10.013. Epub 2013 Oct 14.


How can plant DNA viruses evade siRNA-directed DNA methylation and silencing?

Pooggin MM.

Int J Mol Sci. 2013 Jul 24;14(8):15233-59. doi: 10.3390/ijms140815233. Review.


Silencing and innate immunity in plant defense against viral and non-viral pathogens.

Zvereva AS, Pooggin MM.

Viruses. 2012 Oct 29;4(11):2578-97. doi: 10.3390/v4112578. Review.


Primary and secondary siRNAs in geminivirus-induced gene silencing.

Aregger M, Borah BK, Seguin J, Rajeswaran R, Gubaeva EG, Zvereva AS, Windels D, Vazquez F, Blevins T, Farinelli L, Pooggin MM.

PLoS Pathog. 2012 Sep;8(9):e1002941. doi: 10.1371/journal.ppat.1002941. Epub 2012 Sep 27.


Sequencing of RDR6-dependent double-stranded RNAs reveals novel features of plant siRNA biogenesis.

Rajeswaran R, Aregger M, Zvereva AS, Borah BK, Gubaeva EG, Pooggin MM.

Nucleic Acids Res. 2012 Jul;40(13):6241-54. doi: 10.1093/nar/gks242. Epub 2012 Mar 19.


Short ORF-dependent ribosome shunting operates in an RNA picorna-like virus and a DNA pararetrovirus that cause rice tungro disease.

Pooggin MM, Rajeswaran R, Schepetilnikov MV, Ryabova LA.

PLoS Pathog. 2012;8(3):e1002568. doi: 10.1371/journal.ppat.1002568. Epub 2012 Mar 1.


RDR6-mediated synthesis of complementary RNA is terminated by miRNA stably bound to template RNA.

Rajeswaran R, Pooggin MM.

Nucleic Acids Res. 2012 Jan;40(2):594-9. doi: 10.1093/nar/gkr760. Epub 2011 Sep 19.


Massive production of small RNAs from a non-coding region of Cauliflower mosaic virus in plant defense and viral counter-defense.

Blevins T, Rajeswaran R, Aregger M, Borah BK, Schepetilnikov M, Baerlocher L, Farinelli L, Meins F Jr, Hohn T, Pooggin MM.

Nucleic Acids Res. 2011 Jul;39(12):5003-14. doi: 10.1093/nar/gkr119. Epub 2011 Mar 4.


Complete genome sequence of an Iranian isolate of Potato virus X from the legume plant Pisum sativum.

Esfandiari N, Kohi-Habibi M, Hohn T, Pooggin MM.

Virus Genes. 2009 Aug;39(1):141-5. doi: 10.1007/s11262-009-0371-0. Epub 2009 May 31. No abstract available.


The CaMV transactivator/viroplasmin interferes with RDR6-dependent trans-acting and secondary siRNA pathways in Arabidopsis.

Shivaprasad PV, Rajeswaran R, Blevins T, Schoelz J, Meins F Jr, Hohn T, Pooggin MM.

Nucleic Acids Res. 2008 Oct;36(18):5896-909. doi: 10.1093/nar/gkn590. Epub 2008 Sep 18.


Cross-species functionality of pararetroviral elements driving ribosome shunting.

Pooggin MM, Fütterer J, Hohn T.

PLoS One. 2008 Feb 20;3(2):e1650. doi: 10.1371/journal.pone.0001650.

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