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Items: 1 to 20 of 43

1.

Gradual Distance Dispersal Shapes the Genetic Structure in an Alpine Grasshopper.

Illera JC, Arenas M, López-Sánchez CA, Obeso JR, Laiolo P.

Genes (Basel). 2019 Aug 5;10(8). pii: E590. doi: 10.3390/genes10080590.

2.

The Influence of Heterogeneous Codon Frequencies along Sequences on the Estimation of Molecular Adaptation.

Del Amparo R, Vicens A, Arenas M.

Bioinformatics. 2019 Jul 15. pii: btz558. doi: 10.1093/bioinformatics/btz558. [Epub ahead of print]

PMID:
31304972
3.

Spatially explicit analysis reveals complex human genetic gradients in the Iberian Peninsula.

Pimenta J, Lopes AM, Carracedo A, Arenas M, Amorim A, Comas D.

Sci Rep. 2019 May 24;9(1):7825. doi: 10.1038/s41598-019-44121-6.

4.

The Molecular Clock in the Evolution of Protein Structures.

Pascual-García A, Arenas M, Bastolla U.

Syst Biol. 2019 Apr 23. pii: syz022. doi: 10.1093/sysbio/syz022. [Epub ahead of print]

PMID:
31111152
5.

Survey of Crimean-Congo Hemorrhagic Fever Enzootic Focus, Spain, 2011-2015.

Negredo A, Habela MÁ, Ramírez de Arellano E, Diez F, Lasala F, López P, Sarriá A, Labiod N, Calero-Bernal R, Arenas M, Tenorio A, Estrada-Peña A, Sánchez-Seco MP.

Emerg Infect Dis. 2019 Jun;25(6):1177-1184. doi: 10.3201/eid2506.180877.

6.

SPLATCHE3: simulation of serial genetic data under spatially explicit evolutionary scenarios including long-distance dispersal.

Currat M, Arenas M, Quilodran CS, Excoffier L, Ray N.

Bioinformatics. 2019 May 11. pii: btz311. doi: 10.1093/bioinformatics/btz311. [Epub ahead of print]

PMID:
31077292
7.

Analyzing the functional divergence of Slo1 and Slo3 channel subfamilies.

Vicens A, Vinuesa P, Arenas M, Treviño CL.

Mol Phylogenet Evol. 2019 Apr;133:33-41. doi: 10.1016/j.ympev.2018.12.026. Epub 2018 Dec 23.

PMID:
30586650
8.

Selecting among Alternative Scenarios of Human Evolution by Simulated Genetic Gradients.

Branco C, Arenas M.

Genes (Basel). 2018 Oct 18;9(10). pii: E506. doi: 10.3390/genes9100506. Review.

9.

Influence of mutation bias and hydrophobicity on the substitution rates and sequence entropies of protein evolution.

Jiménez-Santos MJ, Arenas M, Bastolla U.

PeerJ. 2018 Oct 5;6:e5549. doi: 10.7717/peerj.5549. eCollection 2018.

10.

The Influence of Protein Stability on Sequence Evolution: Applications to Phylogenetic Inference.

Bastolla U, Arenas M.

Methods Mol Biol. 2019;1851:215-231. doi: 10.1007/978-1-4939-8736-8_11.

PMID:
30298399
11.

Consequences of diverse evolutionary processes on american genetic gradients of modern humans.

Branco C, Velasco M, Benguigui M, Currat M, Ray N, Arenas M.

Heredity (Edinb). 2018 Dec;121(6):548-556. doi: 10.1038/s41437-018-0122-x. Epub 2018 Jul 18.

PMID:
30022169
12.

Substitution rates predicted by stability-constrained models of protein evolution are not consistent with empirical data.

Jimenez MJ, Arenas M, Bastolla U.

Mol Biol Evol. 2017 Dec 26. doi: 10.1093/molbev/msx327. [Epub ahead of print]

PMID:
29294047
13.

Evaluating the Neolithic Expansion at Both Shores of the Mediterranean Sea.

Pimenta J, Lopes AM, Comas D, Amorim A, Arenas M.

Mol Biol Evol. 2017 Dec 1;34(12):3232-3242. doi: 10.1093/molbev/msx256.

PMID:
29029191
14.

Mutation and recombination in pathogen evolution: Relevance, methods and controversies.

Arenas M, Araujo NM, Branco C, Castelhano N, Castro-Nallar E, Pérez-Losada M.

Infect Genet Evol. 2018 Sep;63:295-306. doi: 10.1016/j.meegid.2017.09.029. Epub 2017 Sep 22. Review.

PMID:
28951202
15.

Microbial sequence typing in the genomic era.

Pérez-Losada M, Arenas M, Castro-Nallar E.

Infect Genet Evol. 2018 Sep;63:346-359. doi: 10.1016/j.meegid.2017.09.022. Epub 2017 Sep 21. Review.

16.

Forensic genetics and genomics: Much more than just a human affair.

Arenas M, Pereira F, Oliveira M, Pinto N, Lopes AM, Gomes V, Carracedo A, Amorim A.

PLoS Genet. 2017 Sep 21;13(9):e1006960. doi: 10.1371/journal.pgen.1006960. eCollection 2017 Sep. Review.

17.

Heterogeneous recombination among Hepatitis B virus genotypes.

Castelhano N, Araujo NM, Arenas M.

Infect Genet Evol. 2017 Oct;54:486-490. doi: 10.1016/j.meegid.2017.08.015. Epub 2017 Aug 18.

PMID:
28827173
18.

ProtASR: An Evolutionary Framework for Ancestral Protein Reconstruction with Selection on Folding Stability.

Arenas M, Weber CC, Liberles DA, Bastolla U.

Syst Biol. 2017 Nov 1;66(6):1054-1064. doi: 10.1093/sysbio/syw121.

PMID:
28057858
19.

Long-Distance Dispersal Shaped Patterns of Human Genetic Diversity in Eurasia.

Alves I, Arenas M, Currat M, Sramkova Hanulova A, Sousa VC, Ray N, Excoffier L.

Mol Biol Evol. 2016 Apr;33(4):946-58. doi: 10.1093/molbev/msv332. Epub 2015 Dec 4.

20.

Trends in substitution models of molecular evolution.

Arenas M.

Front Genet. 2015 Oct 26;6:319. doi: 10.3389/fgene.2015.00319. eCollection 2015.

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