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Items: 1 to 20 of 119

1.

Properties and efficient scrap-and-build repairing of mechanically sheared 3' DNA ends.

Ohtsubo Y, Sakai K, Nagata Y, Tsuda M.

Commun Biol. 2019 Nov 8;2:409. doi: 10.1038/s42003-019-0660-7. eCollection 2019.

2.

Type II DNA Topoisomerases Cause Spontaneous Double-Strand Breaks in Genomic DNA.

Morimoto S, Tsuda M, Bunch H, Sasanuma H, Austin C, Takeda S.

Genes (Basel). 2019 Oct 30;10(11). pii: E868. doi: 10.3390/genes10110868. Review.

3.

Repair of trapped topoisomerase II covalent cleavage complexes: Novel proteasome-independent mechanisms.

Tsuda M, Kitamasu K, Hosokawa S, Nakano T, Ide H.

Nucleosides Nucleotides Nucleic Acids. 2019 Oct 12:1-15. doi: 10.1080/15257770.2019.1674332. [Epub ahead of print]

PMID:
31608820
4.

Conjugative Transfer of IncP-9 Catabolic Plasmids Requires a Previously Uncharacterized Gene, mpfK, Whose Homologs Are Conserved in Various MPFT-Type Plasmids.

Kishida K, Nonoyama S, Lukas T, Kawahara S, Kudo K, Nagata Y, Ohtsubo Y, Tsuda M.

Appl Environ Microbiol. 2019 Nov 27;85(24). pii: e01850-19. doi: 10.1128/AEM.01850-19. Print 2019 Dec 15.

PMID:
31604768
5.

Processing of a single ribonucleotide embedded into DNA by human nucleotide excision repair and DNA polymerase η.

Sassa A, Tada H, Takeishi A, Harada K, Suzuki M, Tsuda M, Sasanuma H, Takeda S, Sugasawa K, Yasui M, Honma M, Ura K.

Sci Rep. 2019 Sep 26;9(1):13910. doi: 10.1038/s41598-019-50421-8.

6.

Complete Genome Sequence of Thalassococcus sp. Strain S3, a Marine Roseobacter Clade Member Capable of Degrading Carbazole.

Vejarano F, Suzuki-Minakuchi C, Ohtsubo Y, Tsuda M, Okada K, Nojiri H.

Microbiol Resour Announc. 2019 Jul 11;8(28). pii: e00231-19. doi: 10.1128/MRA.00231-19.

7.

Lessons from the genomes of lindane-degrading sphingomonads.

Nagata Y, Kato H, Ohtsubo Y, Tsuda M.

Environ Microbiol Rep. 2019 Oct;11(5):630-644. doi: 10.1111/1758-2229.12762. Epub 2019 May 21. Review.

PMID:
31063253
8.

Suppression of substrate inhibition in phenanthrene-degrading Mycobacterium by co-cultivation with a non-degrading Burkholderia strain.

Ogawa N, Kato H, Kishida K, Ichihashi E, Ishige T, Yoshikawa H, Nagata Y, Ohtsubo Y, Tsuda M.

Microbiology. 2019 Jun;165(6):625-637. doi: 10.1099/mic.0.000801. Epub 2019 Apr 17.

PMID:
30994434
9.

Complete Genome Sequence of an Anaerobic Benzene-Degrading Bacterium, Azoarcus sp. Strain DN11.

Devanadera A, Vejarano F, Zhai Y, Suzuki-Minakuchi C, Ohtsubo Y, Tsuda M, Kasai Y, Takahata Y, Okada K, Nojiri H.

Microbiol Resour Announc. 2019 Mar 14;8(11). pii: e01699-18. doi: 10.1128/MRA.01699-18.

10.

PDIP38/PolDIP2 controls the DNA damage tolerance pathways by increasing the relative usage of translesion DNA synthesis over template switching.

Tsuda M, Ogawa S, Ooka M, Kobayashi K, Hirota K, Wakasugi M, Matsunaga T, Sakuma T, Yamamoto T, Chikuma S, Sasanuma H, Debatisse M, Doherty AJ, Fuchs RP, Takeda S.

PLoS One. 2019 Mar 6;14(3):e0213383. doi: 10.1371/journal.pone.0213383. eCollection 2019.

11.

Complete Genome Sequence of Bacillus licheniformis TAB7, a Compost-Deodorizing Strain with Potential for Plant Growth Promotion.

Mpofu E, Vejarano F, Suzuki-Minakuchi C, Ohtsubo Y, Tsuda M, Chakraborty J, Nakajima M, Okada K, Tada N, Kimura T, Nojiri H.

Microbiol Resour Announc. 2019 Jan 24;8(4). pii: e01659-18. doi: 10.1128/MRA.01659-18. eCollection 2019 Jan.

12.

Complete Genome Sequence of the Marine Carbazole-Degrading Bacterium Erythrobacter sp. Strain KY5.

Vejarano F, Suzuki-Minakuchi C, Ohtsubo Y, Tsuda M, Okada K, Nojiri H.

Microbiol Resour Announc. 2018 Aug 30;7(8). pii: e00935-18. doi: 10.1128/MRA.00935-18. eCollection 2018 Aug.

13.

SUMOylation of PCNA by PIAS1 and PIAS4 promotes template switch in the chicken and human B cell lines.

Mohiuddin M, Evans TJ, Rahman MM, Keka IS, Tsuda M, Sasanuma H, Takeda S.

Proc Natl Acad Sci U S A. 2018 Dec 11;115(50):12793-12798. doi: 10.1073/pnas.1716349115. Epub 2018 Nov 28.

14.

BRCA1 ensures genome integrity by eliminating estrogen-induced pathological topoisomerase II-DNA complexes.

Sasanuma H, Tsuda M, Morimoto S, Saha LK, Rahman MM, Kiyooka Y, Fujiike H, Cherniack AD, Itou J, Callen Moreu E, Toi M, Nakada S, Tanaka H, Tsutsui K, Yamada S, Nussenzweig A, Takeda S.

Proc Natl Acad Sci U S A. 2018 Nov 6;115(45):E10642-E10651. doi: 10.1073/pnas.1803177115. Epub 2018 Oct 23.

15.

Optimization of single strand DNA incorporation reaction by Moloney murine leukaemia virus reverse transcriptase.

Ohtsubo Y, Sasaki H, Nagata Y, Tsuda M.

DNA Res. 2018 Oct 1;25(5):477-487. doi: 10.1093/dnares/dsy018.

16.

Establishment of plasmid vector and allelic exchange mutagenesis systems in a mycobacterial strain that is able to degrade polycyclic aromatic hydrocarbon.

Kishida K, Ogawa N, Ichihashi E, Kato H, Nagata Y, Ohtsubo Y, Tsuda M.

Biosci Biotechnol Biochem. 2018 Jul;82(7):1169-1171. doi: 10.1080/09168451.2018.1445522. Epub 2018 Mar 9.

PMID:
29521166
17.

Worse survival after curative resection in patients with pathological stage I non-small cell lung cancer adjoining pulmonary cavity formation.

Kimura H, Saji H, Miyazawa T, Sakai H, Tsuda M, Wakiyama Y, Marushima H, Kojima K, Nakamura H.

J Thorac Dis. 2017 Sep;9(9):3038-3044. doi: 10.21037/jtd.2017.08.42.

18.

ALC1/CHD1L, a chromatin-remodeling enzyme, is required for efficient base excision repair.

Tsuda M, Cho K, Ooka M, Shimizu N, Watanabe R, Yasui A, Nakazawa Y, Ogi T, Harada H, Agama K, Nakamura J, Asada R, Fujiike H, Sakuma T, Yamamoto T, Murai J, Hiraoka M, Koike K, Pommier Y, Takeda S, Hirota K.

PLoS One. 2017 Nov 17;12(11):e0188320. doi: 10.1371/journal.pone.0188320. eCollection 2017.

19.

Different EGFR gene mutations in two patients with synchronous multiple lung cancers: A case report.

Sakai H, Saji H, Kimura H, Tsuda M, Wakiyama Y, Miyazawa T, Marushima H, Kojima K, Hoshikawa M, Takagi M, Nakamura H.

Thorac Cancer. 2018 Jan;9(1):189-192. doi: 10.1111/1759-7714.12554. Epub 2017 Nov 1.

20.

Survival significance of coexisting chronic obstructive pulmonary disease in patients with early lung cancer after curative surgery.

Saji H, Miyazawa T, Sakai H, Kimura Y, Tsuda M, Wakiyama Y, Marushima H, Kojima K, Nakamura H.

Thorac Cancer. 2018 Jan;9(1):19-24. doi: 10.1111/1759-7714.12507. Epub 2017 Oct 4.

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