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Items: 1 to 20 of 30

1.

Oceanographic boundaries constrain microbial diversity gradients in the South Pacific Ocean.

Raes EJ, Bodrossy L, van de Kamp J, Bissett A, Ostrowski M, Brown MV, Sow SLS, Sloyan B, Waite AM.

Proc Natl Acad Sci U S A. 2018 Aug 28;115(35):E8266-E8275. doi: 10.1073/pnas.1719335115. Epub 2018 Aug 14.

PMID:
30108147
2.

Systematic, continental scale temporal monitoring of marine pelagic microbiota by the Australian Marine Microbial Biodiversity Initiative.

Brown MV, van de Kamp J, Ostrowski M, Seymour JR, Ingleton T, Messer LF, Jeffries T, Siboni N, Laverock B, Bibiloni-Isaksson J, Nelson TM, Coman F, Davies CH, Frampton D, Rayner M, Goossen K, Robert S, Holmes B, Abell GCJ, Craw P, Kahlke T, Sow SLS, McAllister K, Windsor J, Skuza M, Crossing R, Patten N, Malthouse P, van Ruth PD, Paulsen I, Fuhrman JA, Richardson A, Koval J, Bissett A, Fitzgerald A, Moltmann T, Bodrossy L.

Sci Data. 2018 Jul 17;5:180130. doi: 10.1038/sdata.2018.130.

3.

Virological Sampling of Inaccessible Wildlife with Drones.

Geoghegan JL, Pirotta V, Harvey E, Smith A, Buchmann JP, Ostrowski M, Eden JS, Harcourt R, Holmes EC.

Viruses. 2018 Jun 2;10(6). pii: E300. doi: 10.3390/v10060300.

4.

A Sample-to-Sequence Protocol for Genus Targeted Transcriptomic Profiling: Application to Marine Synechococcus.

Pitt FD, Millard A, Ostrowski M, Dervish S, Mazard S, Paulsen IT, Zubkov MV, Scanlan DJ.

Front Microbiol. 2016 Oct 14;7:1592. eCollection 2016.

5.

Fluorescence-Based Flow Sorting in Parallel with Transposon Insertion Site Sequencing Identifies Multidrug Efflux Systems in Acinetobacter baumannii.

Hassan KA, Cain AK, Huang T, Liu Q, Elbourne LD, Boinett CJ, Brzoska AJ, Li L, Ostrowski M, Nhu NT, Nhu Tdo H, Baker S, Parkhill J, Paulsen IT.

MBio. 2016 Sep 6;7(5). pii: e01200-16. doi: 10.1128/mBio.01200-16.

6.

A mobility shift assay for DNA detection using nanochannel gradient electrophoresis.

Startsev MA, Ostrowski M, Goldys EM, Inglis DW.

Electrophoresis. 2017 Jan;38(2):335-341. doi: 10.1002/elps.201600358. Epub 2016 Sep 7.

PMID:
27515373
7.

Delineating ecologically significant taxonomic units from global patterns of marine picocyanobacteria.

Farrant GK, Doré H, Cornejo-Castillo FM, Partensky F, Ratin M, Ostrowski M, Pitt FD, Wincker P, Scanlan DJ, Iudicone D, Acinas SG, Garczarek L.

Proc Natl Acad Sci U S A. 2016 Jun 14;113(24):E3365-74. doi: 10.1073/pnas.1524865113. Epub 2016 Jun 2.

8.

Tiny Microbes with a Big Impact: The Role of Cyanobacteria and Their Metabolites in Shaping Our Future.

Mazard S, Penesyan A, Ostrowski M, Paulsen IT, Egan S.

Mar Drugs. 2016 May 17;14(5). pii: E97. doi: 10.3390/md14050097. Review.

9.

High levels of heterogeneity in diazotroph diversity and activity within a putative hotspot for marine nitrogen fixation.

Messer LF, Mahaffey C, M Robinson C, Jeffries TC, Baker KG, Bibiloni Isaksson J, Ostrowski M, Doblin MA, Brown MV, Seymour JR.

ISME J. 2016 Jun;10(6):1499-513. doi: 10.1038/ismej.2015.205. Epub 2015 Nov 27.

10.

Effects of low temperature on tropical and temperate isolates of marine Synechococcus.

Varkey D, Mazard S, Ostrowski M, Tetu SG, Haynes P, Paulsen IT.

ISME J. 2016 May;10(5):1252-63. doi: 10.1038/ismej.2015.179. Epub 2015 Oct 23.

11.

Spatially extensive microbial biogeography of the Indian Ocean provides insights into the unique community structure of a pristine coral atoll.

Jeffries TC, Ostrowski M, Williams RB, Xie C, Jensen RM, Grzymski JJ, Senstius SJ, Givskov M, Hoeke R, Philip GK, Neches RY, Drautz-Moses DI, Chénard C, Paulsen IT, Lauro FM.

Sci Rep. 2015 Oct 20;5:15383. doi: 10.1038/srep15383.

12.

In situ associations between marine photosynthetic picoeukaryotes and potential parasites - a role for fungi?

Lepère C, Ostrowski M, Hartmann M, Zubkov MV, Scanlan DJ.

Environ Microbiol Rep. 2016 Aug;8(4):445-51. doi: 10.1111/1758-2229.12339. Epub 2015 Dec 1.

PMID:
26420747
13.

The ocean sampling day consortium.

Kopf A, Bicak M, Kottmann R, Schnetzer J, Kostadinov I, Lehmann K, Fernandez-Guerra A, Jeanthon C, Rahav E, Ullrich M, Wichels A, Gerdts G, Polymenakou P, Kotoulas G, Siam R, Abdallah RZ, Sonnenschein EC, Cariou T, O'Gara F, Jackson S, Orlic S, Steinke M, Busch J, Duarte B, Caçador I, Canning-Clode J, Bobrova O, Marteinsson V, Reynisson E, Loureiro CM, Luna GM, Quero GM, Löscher CR, Kremp A, DeLorenzo ME, Øvreås L, Tolman J, LaRoche J, Penna A, Frischer M, Davis T, Katherine B, Meyer CP, Ramos S, Magalhães C, Jude-Lemeilleur F, Aguirre-Macedo ML, Wang S, Poulton N, Jones S, Collin R, Fuhrman JA, Conan P, Alonso C, Stambler N, Goodwin K, Yakimov MM, Baltar F, Bodrossy L, Van De Kamp J, Frampton DM, Ostrowski M, Van Ruth P, Malthouse P, Claus S, Deneudt K, Mortelmans J, Pitois S, Wallom D, Salter I, Costa R, Schroeder DC, Kandil MM, Amaral V, Biancalana F, Santana R, Pedrotti ML, Yoshida T, Ogata H, Ingleton T, Munnik K, Rodriguez-Ezpeleta N, Berteaux-Lecellier V, Wecker P, Cancio I, Vaulot D, Bienhold C, Ghazal H, Chaouni B, Essayeh S, Ettamimi S, Zaid el H, Boukhatem N, Bouali A, Chahboune R, Barrijal S, Timinouni M, El Otmani F, Bennani M, Mea M, Todorova N, Karamfilov V, Ten Hoopen P, Cochrane G, L'Haridon S, Bizsel KC, Vezzi A, Lauro FM, Martin P, Jensen RM, Hinks J, Gebbels S, Rosselli R, De Pascale F, Schiavon R, Dos Santos A, Villar E, Pesant S, Cataletto B, Malfatti F, Edirisinghe R, Silveira JA, Barbier M, Turk V, Tinta T, Fuller WJ, Salihoglu I, Serakinci N, Ergoren MC, Bresnan E, Iriberri J, Nyhus PA, Bente E, Karlsen HE, Golyshin PN, Gasol JM, Moncheva S, Dzhembekova N, Johnson Z, Sinigalliano CD, Gidley ML, Zingone A, Danovaro R, Tsiamis G, Clark MS, Costa AC, El Bour M, Martins AM, Collins RE, Ducluzeau AL, Martinez J, Costello MJ, Amaral-Zettler LA, Gilbert JA, Davies N, Field D, Glöckner FO.

Gigascience. 2015 Jun 19;4:27. doi: 10.1186/s13742-015-0066-5. eCollection 2015.

14.

Cell-specific CO2 fixation rates of two distinct groups of plastidic protists in the Atlantic Ocean remain unchanged after nutrient addition.

Grob C, Jardillier L, Hartmann M, Ostrowski M, Zubkov MV, Scanlan DJ.

Environ Microbiol Rep. 2015 Apr;7(2):211-8. doi: 10.1111/1758-2229.12228. Epub 2015 Jan 23.

PMID:
25345650
15.

The common oceanographer: crowdsourcing the collection of oceanographic data.

Lauro FM, Senstius SJ, Cullen J, Neches R, Jensen RM, Brown MV, Darling AE, Givskov M, McDougald D, Hoeke R, Ostrowski M, Philip GK, Paulsen IT, Grzymski JJ.

PLoS Biol. 2014 Sep 9;12(9):e1001947. doi: 10.1371/journal.pbio.1001947. eCollection 2014 Sep. No abstract available.

16.

Efficient CO2 fixation by surface Prochlorococcus in the Atlantic Ocean.

Hartmann M, Gomez-Pereira P, Grob C, Ostrowski M, Scanlan DJ, Zubkov MV.

ISME J. 2014 Nov;8(11):2280-9. doi: 10.1038/ismej.2014.56. Epub 2014 Apr 24.

17.

A trait based perspective on the biogeography of common and abundant marine bacterioplankton clades.

Brown MV, Ostrowski M, Grzymski JJ, Lauro FM.

Mar Genomics. 2014 Jun;15:17-28. doi: 10.1016/j.margen.2014.03.002. Epub 2014 Mar 21. Review.

18.

Targeted genomics of flow cytometrically sorted cultured and uncultured microbial groups.

Mazard S, Ostrowski M, Holland R, Zubkov MV, Scanlan DJ.

Methods Mol Biol. 2014;1096:203-12. doi: 10.1007/978-1-62703-712-9_16.

PMID:
24515371
19.

A microarray for assessing transcription from pelagic marine microbial taxa.

Shilova IN, Robidart JC, James Tripp H, Turk-Kubo K, Wawrik B, Post AF, Thompson AW, Ward B, Hollibaugh JT, Millard A, Ostrowski M, Scanlan DJ, Paerl RW, Stuart R, Zehr JP.

ISME J. 2014 Jul;8(7):1476-91. doi: 10.1038/ismej.2014.1. Epub 2014 Jan 30.

20.

Elemental composition of natural populations of key microbial groups in Atlantic waters.

Grob C, Ostrowski M, Holland RJ, Heldal M, Norland S, Erichsen ES, Blindauer C, Martin AP, Zubkov MV, Scanlan DJ.

Environ Microbiol. 2013 Nov;15(11):3054-64. doi: 10.1111/1462-2920.12145. Epub 2013 May 13.

PMID:
23663455

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