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Items: 1 to 20 of 51

1.

Characterization of the Photophysical Behavior of DFHBI Derivatives: Fluorogenic Molecules that Illuminate the Spinach RNA Aptamer.

Santra K, Geraskin I, Nilsen-Hamilton M, Kraus GA, Petrich JW.

J Phys Chem B. 2019 Mar 21;123(11):2536-2545. doi: 10.1021/acs.jpcb.8b11166. Epub 2019 Mar 12.

PMID:
30807171
2.

Label free thrombin detection in presence of high concentration of albumin using an aptamer-functionalized nanoporous membrane.

Gosai A, Hau Yeah BS, Nilsen-Hamilton M, Shrotriya P.

Biosens Bioelectron. 2019 Feb 1;126:88-95. doi: 10.1016/j.bios.2018.10.010. Epub 2018 Oct 18.

PMID:
30396022
3.

Aptamer-enabled uptake of small molecule ligands.

Auwardt SL, Seo YJ, Ilgu M, Ray J, Feldges RR, Shubham S, Bendickson L, Levine HA, Nilsen-Hamilton M.

Sci Rep. 2018 Oct 24;8(1):15712. doi: 10.1038/s41598-018-33887-w.

4.

A 2'FY-RNA Motif Defines an Aptamer for Ebolavirus Secreted Protein.

Shubham S, Hoinka J, Banerjee S, Swanson E, Dillard JA, Lennemann NJ, Przytycka TM, Maury W, Nilsen-Hamilton M.

Sci Rep. 2018 Aug 17;8(1):12373. doi: 10.1038/s41598-018-30590-8.

5.

Creating metamaterial building blocks with directed photochemical metallization of silver onto DNA origami templates.

Hossen MM, Bendickson L, Palo PE, Yao Z, Nilsen-Hamilton M, Hillier AC.

Nanotechnology. 2018 Aug 31;29(35):355603. doi: 10.1088/1361-6528/aacb16. Epub 2018 Jun 7.

PMID:
29877867
6.

Data on IL-10R neutralization-induced chronic colitis in Lipocalin 2 deficient mice on BALB/c background.

Singh V, Yeoh BS, Nilsen-Hamilton M, Berger T, Mak TW, Vijay-Kumar M.

Data Brief. 2017 Mar 8;11:588-592. doi: 10.1016/j.dib.2017.03.002. eCollection 2017 Apr.

7.

Specificity and Ligand Affinities of the Cocaine Aptamer: Impact of Structural Features and Physiological NaCl.

Sachan A, Ilgu M, Kempema A, Kraus GA, Nilsen-Hamilton M.

Anal Chem. 2016 Aug 2;88(15):7715-23. doi: 10.1021/acs.analchem.6b01633. Epub 2016 Jul 11.

PMID:
27348073
8.

Aptamers in analytics.

Ilgu M, Nilsen-Hamilton M.

Analyst. 2016 Mar 7;141(5):1551-68. doi: 10.1039/c5an01824b. Review.

9.

Light-up and FRET aptamer reporters; evaluating their applications for imaging transcription in eukaryotic cells.

Ilgu M, Ray J, Bendickson L, Wang T, Geraskin IM, Kraus GA, Nilsen-Hamilton M.

Methods. 2016 Apr 1;98:26-33. doi: 10.1016/j.ymeth.2015.12.009. Epub 2015 Dec 17.

10.

Morphological transformations in the magnetite biomineralizing protein Mms6 in iron solutions: a small-angle X-ray scattering study.

Zhang H, Liu X, Feng S, Wang W, Schmidt-Rohr K, Akinc M, Nilsen-Hamilton M, Vaknin D, Mallapragada S.

Langmuir. 2015 Mar 10;31(9):2818-25. doi: 10.1021/la5044377. Epub 2015 Feb 24.

PMID:
25669122
11.

A computational study of alternate SELEX.

Seo YJ, Nilsen-Hamilton M, Levine HA.

Bull Math Biol. 2014 Jul;76(7):1455-521. doi: 10.1007/s11538-014-9954-6. Epub 2014 May 31.

PMID:
24878869
12.

An adaptable pentaloop defines a robust neomycin-B RNA aptamer with conditional ligand-bound structures.

Ilgu M, Fulton DB, Yennamalli RM, Lamm MH, Sen TZ, Nilsen-Hamilton M.

RNA. 2014 Jun;20(6):815-24. doi: 10.1261/rna.041145.113. Epub 2014 Apr 22.

13.

Live-cell imaging of Pol II promoter activity to monitor gene expression with RNA IMAGEtag reporters.

Shin I, Ray J, Gupta V, Ilgu M, Beasley J, Bendickson L, Mehanovic S, Kraus GA, Nilsen-Hamilton M.

Nucleic Acids Res. 2014 Jun;42(11):e90. doi: 10.1093/nar/gku297. Epub 2014 Apr 20.

14.

Aptamers: multifunctional molecules for biomedical research.

Banerjee J, Nilsen-Hamilton M.

J Mol Med (Berl). 2013 Dec;91(12):1333-42. doi: 10.1007/s00109-013-1085-2. Epub 2013 Sep 18. Review.

PMID:
24045702
15.

Integrated self-assembly of the Mms6 magnetosome protein to form an iron-responsive structure.

Feng S, Wang L, Palo P, Liu X, Mallapragada SK, Nilsen-Hamilton M.

Int J Mol Sci. 2013 Jul 12;14(7):14594-606. doi: 10.3390/ijms140714594.

16.

Investigating the malleability of RNA aptamers.

Ilgu M, Wang T, Lamm MH, Nilsen-Hamilton M.

Methods. 2013 Sep 15;63(2):178-87. doi: 10.1016/j.ymeth.2013.03.016. Epub 2013 Mar 25.

PMID:
23535583
17.

An RNA aptamer-based microcantilever sensor to detect the inflammatory marker, mouse lipocalin-2.

Zhai L, Wang T, Kang K, Zhao Y, Shrotriya P, Nilsen-Hamilton M.

Anal Chem. 2012 Oct 16;84(20):8763-70. doi: 10.1021/ac3020643. Epub 2012 Sep 26.

PMID:
22946879
18.

A mathematical model for selective differentiation of neural progenitor cells on micropatterned polymer substrates.

Howk CL, Levine HA, Smiley MW, Mallapragada SK, Nilsen-Hamilton M, Oh J, Sakaguchi DS.

Math Biosci. 2012 Aug;238(2):65-79. doi: 10.1016/j.mbs.2012.04.001. Epub 2012 Apr 30.

19.

Synergistic and multidimensional regulation of plasminogen activator inhibitor type 1 expression by transforming growth factor type β and epidermal growth factor.

Song X, Thalacker FW, Nilsen-Hamilton M.

J Biol Chem. 2012 Apr 6;287(15):12520-8. doi: 10.1074/jbc.M111.338079. Epub 2012 Feb 10.

20.

Interfacial properties and iron binding to bacterial proteins that promote the growth of magnetite nanocrystals: X-ray reflectivity and surface spectroscopy studies.

Wang W, Bu W, Wang L, Palo PE, Mallapragada S, Nilsen-Hamilton M, Vaknin D.

Langmuir. 2012 Mar 6;28(9):4274-82. doi: 10.1021/la205074n. Epub 2012 Feb 27.

PMID:
22316331

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