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Items: 1 to 20 of 75

1.

Rare Earth Elements Alter Redox Balance in Methylomicrobium alcaliphilum 20ZR.

Akberdin IR, Collins DA, Hamilton R, Oshchepkov DY, Shukla AK, Nicora CD, Nakayasu ES, Adkins JN, Kalyuzhnaya MG.

Front Microbiol. 2018 Nov 27;9:2735. doi: 10.3389/fmicb.2018.02735. eCollection 2018.

2.

Navigating methane metabolism: Enzymes, compartments, and networks.

Collins DA, Kalyuzhnaya MG.

Methods Enzymol. 2018;613:349-383. doi: 10.1016/bs.mie.2018.10.010. Epub 2018 Nov 24.

PMID:
30509473
3.

Biogas Biocatalysis: Methanotrophic Bacterial Cultivation, Metabolite Profiling, and Bioconversion to Lactic Acid.

Henard CA, Franklin TG, Youhenna B, But S, Alexander D, Kalyuzhnaya MG, Guarnieri MT.

Front Microbiol. 2018 Oct 31;9:2610. doi: 10.3389/fmicb.2018.02610. eCollection 2018.

4.

Systematic metabolic engineering of Methylomicrobium alcaliphilum 20Z for 2,3-butanediol production from methane.

Nguyen AD, Hwang IY, Lee OK, Kim D, Kalyuzhnaya MG, Mariyana R, Hadiyati S, Kim MS, Lee EY.

Metab Eng. 2018 May;47:323-333. doi: 10.1016/j.ymben.2018.04.010. Epub 2018 Apr 16.

PMID:
29673960
5.

Author Correction: Methane utilization in Methylomicrobium alcaliphilum 20ZR: a systems approach.

Akberdin IR, Thompson M, Hamilton R, Desai N, Alexander D, Henard CA, Guarnieri MT, Kalyuzhnaya MG.

Sci Rep. 2018 Mar 14;8(1):4753. doi: 10.1038/s41598-018-23088-w.

6.

Current Trends in Methylotrophy.

Chistoserdova L, Kalyuzhnaya MG.

Trends Microbiol. 2018 Aug;26(8):703-714. doi: 10.1016/j.tim.2018.01.011. Epub 2018 Feb 19. Review.

PMID:
29471983
7.

Methane utilization in Methylomicrobium alcaliphilum 20ZR: a systems approach.

Akberdin IR, Thompson M, Hamilton R, Desai N, Alexander D, Henard CA, Guarnieri MT, Kalyuzhnaya MG.

Sci Rep. 2018 Feb 6;8(1):2512. doi: 10.1038/s41598-018-20574-z. Erratum in: Sci Rep. 2018 Mar 14;8(1):4753.

8.

Draft Genome Sequences of Two Gammaproteobacterial Methanotrophs Isolated from Rice Ecosystems.

Frindte K, Kalyuzhnaya MG, Bringel F, Dunfield PF, Jetten MSM, Khmelenina VN, Klotz MG, Murrell JC, Op den Camp HJM, Sakai Y, Semrau JD, Shapiro N, DiSpirito AA, Stein LY, Svenning MM, Trotsenko YA, Vuilleumier S, Woyke T, Knief C.

Genome Announc. 2017 Aug 17;5(33). pii: e00526-17. doi: 10.1128/genomeA.00526-17.

9.

Methanotroph-derived bacteriohopanepolyol signatures as a function of temperature related growth, survival, cell death and preservation in the geological record.

Osborne KA, Gray ND, Sherry A, Leary P, Mejeha O, Bischoff J, Rush D, Sidgwick FR, Birgel D, Kalyuzhnaya MG, Talbot HM.

Environ Microbiol Rep. 2017 Oct;9(5):492-500. doi: 10.1111/1758-2229.12570. Epub 2017 Oct 2.

PMID:
28772060
10.

Fatty Acid Biosynthesis Pathways in Methylomicrobium buryatense 5G(B1).

Demidenko A, Akberdin IR, Allemann M, Allen EE, Kalyuzhnaya MG.

Front Microbiol. 2017 Jan 10;7:2167. doi: 10.3389/fmicb.2016.02167. eCollection 2016.

11.

Bioconversion of methane to lactate by an obligate methanotrophic bacterium.

Henard CA, Smith H, Dowe N, Kalyuzhnaya MG, Pienkos PT, Guarnieri MT.

Sci Rep. 2016 Feb 23;6:21585. doi: 10.1038/srep21585.

12.

Draft Genome Sequences of Gammaproteobacterial Methanotrophs Isolated from Marine Ecosystems.

Flynn JD, Hirayama H, Sakai Y, Dunfield PF, Klotz MG, Knief C, Op den Camp HJ, Jetten MS, Khmelenina VN, Trotsenko YA, Murrell JC, Semrau JD, Svenning MM, Stein LY, Kyrpides N, Shapiro N, Woyke T, Bringel F, Vuilleumier S, DiSpirito AA, Kalyuzhnaya MG.

Genome Announc. 2016 Jan 21;4(1). pii: e01629-15. doi: 10.1128/genomeA.01629-15.

13.

Genome-scale metabolic reconstructions and theoretical investigation of methane conversion in Methylomicrobium buryatense strain 5G(B1).

de la Torre A, Metivier A, Chu F, Laurens LM, Beck DA, Pienkos PT, Lidstrom ME, Kalyuzhnaya MG.

Microb Cell Fact. 2015 Nov 25;14:188. doi: 10.1186/s12934-015-0377-3.

14.

Functional and genomic diversity of methylotrophic Rhodocyclaceae: description of Methyloversatilis discipulorum sp. nov.

Smalley NE, Taipale S, De Marco P, Doronina NV, Kyrpides N, Shapiro N, Woyke T, Kalyuzhnaya MG.

Int J Syst Evol Microbiol. 2015 Jul;65(7):2227-33. doi: 10.1099/ijs.0.000190.

PMID:
26231539
15.

Draft Genome Sequence of the Moderately Halophilic Methanotroph Methylohalobius crimeensis Strain 10Ki.

Sharp CE, Smirnova AV, Kalyuzhnaya MG, Bringel F, Hirayama H, Jetten MS, Khmelenina VN, Klotz MG, Knief C, Kyrpides N, Op den Camp HJ, Reshetnikov AS, Sakai Y, Shapiro N, Trotsenko YA, Vuilleumier S, Woyke T, Dunfield PF.

Genome Announc. 2015 Jun 11;3(3). pii: e00644-15. doi: 10.1128/genomeA.00644-15.

16.

Draft genomes of gammaproteobacterial methanotrophs isolated from terrestrial ecosystems.

Hamilton R, Kits KD, Ramonovskaya VA, Rozova ON, Yurimoto H, Iguchi H, Khmelenina VN, Sakai Y, Dunfield PF, Klotz MG, Knief C, Op den Camp HJ, Jetten MS, Bringel F, Vuilleumier S, Svenning MM, Shapiro N, Woyke T, Trotsenko YA, Stein LY, Kalyuzhnaya MG.

Genome Announc. 2015 Jun 4;3(3). pii: e00515-15. doi: 10.1128/genomeA.00515-15.

17.

Metabolic engineering in methanotrophic bacteria.

Kalyuzhnaya MG, Puri AW, Lidstrom ME.

Metab Eng. 2015 May;29:142-152. doi: 10.1016/j.ymben.2015.03.010. Epub 2015 Mar 28. Review.

PMID:
25825038
18.

Draft genome sequences of gammaproteobacterial methanotrophs isolated from lake washington sediment.

Kalyuzhnaya MG, Lamb AE, McTaggart TL, Oshkin IY, Shapiro N, Woyke T, Chistoserdova L.

Genome Announc. 2015 Mar 12;3(2). pii: e00103-15. doi: 10.1128/genomeA.00103-15.

19.

Draft Genome Sequence of Methyloferula stellata AR4, an Obligate Methanotroph Possessing Only a Soluble Methane Monooxygenase.

Dedysh SN, Naumoff DG, Vorobev AV, Kyrpides N, Woyke T, Shapiro N, Crombie AT, Murrell JC, Kalyuzhnaya MG, Smirnova AV, Dunfield PF.

Genome Announc. 2015 Mar 5;3(2). pii: e01555-14. doi: 10.1128/genomeA.01555-14.

20.

Multiphyletic origins of methylotrophy in Alphaproteobacteria, exemplified by comparative genomics of Lake Washington isolates.

Beck DA, McTaggart TL, Setboonsarng U, Vorobev A, Goodwin L, Shapiro N, Woyke T, Kalyuzhnaya MG, Lidstrom ME, Chistoserdova L.

Environ Microbiol. 2015 Mar;17(3):547-54. doi: 10.1111/1462-2920.12736. Epub 2015 Feb 11.

PMID:
25683159

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