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Items: 14

1.

A tRNA-mimic Strategy to Explore the Role of G34 of tRNAGly in Translation and Codon Frameshifting.

Janvier A, Despons L, Schaeffer L, Tidu A, Martin F, Eriani G.

Int J Mol Sci. 2019 Aug 11;20(16). pii: E3911. doi: 10.3390/ijms20163911.

2.

In cell mutational interference mapping experiment (in cell MIME) identifies the 5' polyadenylation signal as a dual regulator of HIV-1 genomic RNA production and packaging.

Smyth RP, Smith MR, Jousset AC, Despons L, Laumond G, Decoville T, Cattenoz P, Moog C, Jossinet F, Mougel M, Paillart JC, von Kleist M, Marquet R.

Nucleic Acids Res. 2018 May 18;46(9):e57. doi: 10.1093/nar/gky152.

3.

Mutational interference mapping experiment (MIME) for studying RNA structure and function.

Smyth RP, Despons L, Huili G, Bernacchi S, Hijnen M, Mak J, Jossinet F, Weixi L, Paillart JC, von Kleist M, Marquet R.

Nat Methods. 2015 Sep;12(9):866-72. doi: 10.1038/nmeth.3490. Epub 2015 Aug 3.

PMID:
26237229
4.

The complete genome of Blastobotrys (Arxula) adeninivorans LS3 - a yeast of biotechnological interest.

Kunze G, Gaillardin C, Czernicka M, Durrens P, Martin T, Böer E, Gabaldón T, Cruz JA, Talla E, Marck C, Goffeau A, Barbe V, Baret P, Baronian K, Beier S, Bleykasten C, Bode R, Casaregola S, Despons L, Fairhead C, Giersberg M, Gierski PP, Hähnel U, Hartmann A, Jankowska D, Jubin C, Jung P, Lafontaine I, Leh-Louis V, Lemaire M, Marcet-Houben M, Mascher M, Morel G, Richard GF, Riechen J, Sacerdot C, Sarkar A, Savel G, Schacherer J, Sherman DJ, Stein N, Straub ML, Thierry A, Trautwein-Schult A, Vacherie B, Westhof E, Worch S, Dujon B, Souciet JL, Wincker P, Scholz U, Neuvéglise C.

Biotechnol Biofuels. 2014 Apr 24;7:66. doi: 10.1186/1754-6834-7-66. eCollection 2014.

5.

Complete DNA sequence of Kuraishia capsulata illustrates novel genomic features among budding yeasts (Saccharomycotina).

Morales L, Noel B, Porcel B, Marcet-Houben M, Hullo MF, Sacerdot C, Tekaia F, Leh-Louis V, Despons L, Khanna V, Aury JM, Barbe V, Couloux A, Labadie K, Pelletier E, Souciet JL, Boekhout T, Gabaldon T, Wincker P, Dujon B.

Genome Biol Evol. 2013;5(12):2524-39. doi: 10.1093/gbe/evt201.

6.

Pichia sorbitophila, an Interspecies Yeast Hybrid, Reveals Early Steps of Genome Resolution After Polyploidization.

Louis VL, Despons L, Friedrich A, Martin T, Durrens P, Casarégola S, Neuvéglise C, Fairhead C, Marck C, Cruz JA, Straub ML, Kugler V, Sacerdot C, Uzunov Z, Thierry A, Weiss S, Bleykasten C, De Montigny J, Jacques N, Jung P, Lemaire M, Mallet S, Morel G, Richard GF, Sarkar A, Savel G, Schacherer J, Seret ML, Talla E, Samson G, Jubin C, Poulain J, Vacherie B, Barbe V, Pelletier E, Sherman DJ, Westhof E, Weissenbach J, Baret PV, Wincker P, Gaillardin C, Dujon B, Souciet JL.

G3 (Bethesda). 2012 Feb;2(2):299-311. doi: 10.1534/g3.111.000745. Epub 2012 Feb 1.

7.

Tandem gene arrays, plastic chromosomal organizations.

Despons L, Uzunov Z, Louis VL.

C R Biol. 2011 Aug-Sep;334(8-9):639-46. doi: 10.1016/j.crvi.2011.05.012. Epub 2011 Jul 5. Review.

PMID:
21819945
8.

Genome-wide computational prediction of tandem gene arrays: application in yeasts.

Despons L, Baret PV, Frangeul L, Louis VL, Durrens P, Souciet JL.

BMC Genomics. 2010 Jan 21;11:56. doi: 10.1186/1471-2164-11-56.

9.

Comparative genomics of protoploid Saccharomycetaceae.

Génolevures Consortium, Souciet JL, Dujon B, Gaillardin C, Johnston M, Baret PV, Cliften P, Sherman DJ, Weissenbach J, Westhof E, Wincker P, Jubin C, Poulain J, Barbe V, Ségurens B, Artiguenave F, Anthouard V, Vacherie B, Val ME, Fulton RS, Minx P, Wilson R, Durrens P, Jean G, Marck C, Martin T, Nikolski M, Rolland T, Seret ML, Casarégola S, Despons L, Fairhead C, Fischer G, Lafontaine I, Leh V, Lemaire M, de Montigny J, Neuvéglise C, Thierry A, Blanc-Lenfle I, Bleykasten C, Diffels J, Fritsch E, Frangeul L, Goëffon A, Jauniaux N, Kachouri-Lafond R, Payen C, Potier S, Pribylova L, Ozanne C, Richard GF, Sacerdot C, Straub ML, Talla E.

Genome Res. 2009 Oct;19(10):1696-709. doi: 10.1101/gr.091546.109. Epub 2009 Jun 12.

10.

An evolutionary scenario for one of the largest yeast gene families.

Despons L, Wirth B, Louis VL, Potier S, Souciet JL.

Trends Genet. 2006 Jan;22(1):10-5. Epub 2005 Nov 2.

PMID:
16269202
11.

Paleogenomics or the search for remnant duplicated copies of the yeast DUP240 gene family in intergenic areas.

Wirth B, Louis VL, Potier S, Souciet JL, Despons L.

Mol Biol Evol. 2005 Sep;22(9):1764-71. Epub 2005 May 25.

PMID:
15917500
12.

Expansion and contraction of the DUP240 multigene family in Saccharomyces cerevisiae populations.

Leh-Louis V, Wirth B, Potier S, Souciet JL, Despons L.

Genetics. 2004 Aug;167(4):1611-9.

13.

Genome evolution in yeasts.

Dujon B, Sherman D, Fischer G, Durrens P, Casaregola S, Lafontaine I, De Montigny J, Marck C, Neuvéglise C, Talla E, Goffard N, Frangeul L, Aigle M, Anthouard V, Babour A, Barbe V, Barnay S, Blanchin S, Beckerich JM, Beyne E, Bleykasten C, Boisramé A, Boyer J, Cattolico L, Confanioleri F, De Daruvar A, Despons L, Fabre E, Fairhead C, Ferry-Dumazet H, Groppi A, Hantraye F, Hennequin C, Jauniaux N, Joyet P, Kachouri R, Kerrest A, Koszul R, Lemaire M, Lesur I, Ma L, Muller H, Nicaud JM, Nikolski M, Oztas S, Ozier-Kalogeropoulos O, Pellenz S, Potier S, Richard GF, Straub ML, Suleau A, Swennen D, Tekaia F, Wésolowski-Louvel M, Westhof E, Wirth B, Zeniou-Meyer M, Zivanovic I, Bolotin-Fukuhara M, Thierry A, Bouchier C, Caudron B, Scarpelli C, Gaillardin C, Weissenbach J, Wincker P, Souciet JL.

Nature. 2004 Jul 1;430(6995):35-44.

PMID:
15229592
14.

Functional analysis of the Saccharomyces cerevisiae DUP240 multigene family reveals membrane-associated proteins that are not essential for cell viability.

Poirey R, Despons L, Leh V, Lafuente MJ, Potier S, Souciet JL, Jauniaux JC.

Microbiology. 2002 Jul;148(Pt 7):2111-23.

PMID:
12101299

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