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Items: 1 to 20 of 98

1.

Poly-Saturated Dolichols from Filamentous Fungi Modulate Activity of Dolichol-Dependent Glycosyltransferase and Physical Properties of Membranes.

Gryz E, Perlińska-Lenart U, Gawarecka K, Jozwiak A, Piłsyk S, Lipko A, Jemiola-Rzeminska M, Bernat P, Muszewska A, Steczkiewicz K, Ginalski K, Długoński J, Strzalka K, Swiezewska E, Kruszewska JS.

Int J Mol Sci. 2019 Jun 21;20(12). pii: E3043. doi: 10.3390/ijms20123043.

2.

qDSB-Seq is a general method for genome-wide quantification of DNA double-strand breaks using sequencing.

Zhu Y, Biernacka A, Pardo B, Dojer N, Forey R, Skrzypczak M, Fongang B, Nde J, Yousefi R, Pasero P, Ginalski K, Rowicka M.

Nat Commun. 2019 May 24;10(1):2313. doi: 10.1038/s41467-019-10332-8.

3.

Transposable elements contribute to fungal genes and impact fungal lifestyle.

Muszewska A, Steczkiewicz K, Stepniewska-Dziubinska M, Ginalski K.

Sci Rep. 2019 Mar 13;9(1):4307. doi: 10.1038/s41598-019-40965-0.

4.

Classification, substrate specificity and structural features of D-2-hydroxyacid dehydrogenases: 2HADH knowledgebase.

Matelska D, Shabalin IG, Jabłońska J, Domagalski MJ, Kutner J, Ginalski K, Minor W.

BMC Evol Biol. 2018 Dec 22;18(1):199. doi: 10.1186/s12862-018-1309-8.

5.

i-BLESS is an ultra-sensitive method for detection of DNA double-strand breaks.

Biernacka A, Zhu Y, Skrzypczak M, Forey R, Pardo B, Grzelak M, Nde J, Mitra A, Kudlicki A, Crosetto N, Pasero P, Rowicka M, Ginalski K.

Commun Biol. 2018 Oct 31;1:181. doi: 10.1038/s42003-018-0165-9. eCollection 2018.

6.

Comprehensive Mapping of Histone Modifications at DNA Double-Strand Breaks Deciphers Repair Pathway Chromatin Signatures.

Clouaire T, Rocher V, Lashgari A, Arnould C, Aguirrebengoa M, Biernacka A, Skrzypczak M, Aymard F, Fongang B, Dojer N, Iacovoni JS, Rowicka M, Ginalski K, Côté J, Legube G.

Mol Cell. 2018 Oct 18;72(2):250-262.e6. doi: 10.1016/j.molcel.2018.08.020. Epub 2018 Sep 27.

7.

Exome scale map of genetic alterations promoting metastasis in colorectal cancer.

Goryca K, Kulecka M, Paziewska A, Dabrowska M, Grzelak M, Skrzypczak M, Ginalski K, Mroz A, Rutkowski A, Paczkowska K, Mikula M, Ostrowski J.

BMC Genet. 2018 Sep 19;19(1):85. doi: 10.1186/s12863-018-0673-0.

8.

Predicting proteome dynamics using gene expression data.

Kuchta K, Towpik J, Biernacka A, Kutner J, Kudlicki A, Ginalski K, Rowicka M.

Sci Rep. 2018 Sep 14;8(1):13866. doi: 10.1038/s41598-018-31752-4.

9.

Comparative genomic analysis of Staphylococcus lugdunensis shows a closed pan-genome and multiple barriers to horizontal gene transfer.

Argemi X, Matelska D, Ginalski K, Riegel P, Hansmann Y, Bloom J, Pestel-Caron M, Dahyot S, Lebeurre J, Prévost G.

BMC Genomics. 2018 Aug 20;19(1):621. doi: 10.1186/s12864-018-4978-1.

10.

Hypermethylation of TRIM59 and KLF14 Influences Cell Death Signaling in Familial Alzheimer's Disease.

Wezyk M, Spólnicka M, Pośpiech E, Pepłońska B, Zbieć-Piekarska R, Ilkowski J, Styczyńska M, Barczak A, Zboch M, Filipek-Gliszczynska A, Skrzypczak M, Ginalski K, Kabza M, Makałowska I, Barcikowska-Kotowicz M, Branicki W, Żekanowski C.

Oxid Med Cell Longev. 2018 Apr 4;2018:6918797. doi: 10.1155/2018/6918797. eCollection 2018.

11.

Predicting double-strand DNA breaks using epigenome marks or DNA at kilobase resolution.

Mourad R, Ginalski K, Legube G, Cuvier O.

Genome Biol. 2018 Mar 15;19(1):34. doi: 10.1186/s13059-018-1411-7.

12.

Overactive BRCA1 Affects Presenilin 1 in Induced Pluripotent Stem Cell-Derived Neurons in Alzheimer's Disease.

Wezyk M, Szybinska A, Wojsiat J, Szczerba M, Day K, Ronnholm H, Kele M, Berdynski M, Peplonska B, Fichna JP, Ilkowski J, Styczynska M, Barczak A, Zboch M, Filipek-Gliszczynska A, Bojakowski K, Skrzypczak M, Ginalski K, Kabza M, Makalowska I, Barcikowska-Kotowicz M, Wojda U, Falk A, Zekanowski C.

J Alzheimers Dis. 2018;62(1):175-202. doi: 10.3233/JAD-170830.

PMID:
29439343
13.

Dbf4 recruitment by forkhead transcription factors defines an upstream rate-limiting step in determining origin firing timing.

Fang D, Lengronne A, Shi D, Forey R, Skrzypczak M, Ginalski K, Yan C, Wang X, Cao Q, Pasero P, Lou H.

Genes Dev. 2017 Dec 1;31(23-24):2405-2415. doi: 10.1101/gad.306571.117. Epub 2018 Jan 12.

14.

Structural, Biochemical, and Evolutionary Characterizations of Glyoxylate/Hydroxypyruvate Reductases Show Their Division into Two Distinct Subfamilies.

Kutner J, Shabalin IG, Matelska D, Handing KB, Gasiorowska O, Sroka P, Gorna MW, Ginalski K, Wozniak K, Minor W.

Biochemistry. 2018 Feb 13;57(6):963-977. doi: 10.1021/acs.biochem.7b01137. Epub 2018 Jan 26.

15.

Cut-and-Paste Transposons in Fungi with Diverse Lifestyles.

Muszewska A, Steczkiewicz K, Stepniewska-Dziubinska M, Ginalski K.

Genome Biol Evol. 2017 Dec 1;9(12):3463-3477. doi: 10.1093/gbe/evx261.

16.

Systematic classification of the His-Me finger superfamily.

Jablonska J, Matelska D, Steczkiewicz K, Ginalski K.

Nucleic Acids Res. 2017 Nov 16;45(20):11479-11494. doi: 10.1093/nar/gkx924.

17.
18.

Fungal lifestyle reflected in serine protease repertoire.

Muszewska A, Stepniewska-Dziubinska MM, Steczkiewicz K, Pawlowska J, Dziedzic A, Ginalski K.

Sci Rep. 2017 Aug 22;7(1):9147. doi: 10.1038/s41598-017-09644-w.

19.

A heterozygous mutation in GOT1 is associated with familial macro-aspartate aminotransferase.

Kulecka M, Wierzbicka A, Paziewska A, Mikula M, Habior A, Janczyk W, Dabrowska M, Karczmarski J, Lazniewski M, Ginalski K, Czlonkowska A, Socha P, Ostrowski J.

J Hepatol. 2017 Nov;67(5):1026-1030. doi: 10.1016/j.jhep.2017.07.003. Epub 2017 Jul 15.

20.

Comprehensive classification of the PIN domain-like superfamily.

Matelska D, Steczkiewicz K, Ginalski K.

Nucleic Acids Res. 2017 Jul 7;45(12):6995-7020. doi: 10.1093/nar/gkx494.

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