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Items: 1 to 20 of 23


Environment-dependent introgression from Quercus dentata to a coastal ecotype of Quercus mongolica var. crispula in northern Japan.

Nagamitsu T, Uchiyama K, Izuno A, Shimizu H, Nakanishi A.

New Phytol. 2019 Aug 19. doi: 10.1111/nph.16131. [Epub ahead of print]


Scanning RNA-Seq and RAD-Seq approach to develop SNP markers closely linked to MALE STERILITY 1 (MS1) in Cryptomeria japonica D. Don.

Ueno S, Uchiyama K, Moriguchi Y, Ujino-Ihara T, Matsumoto A, Wei FJ, Saito M, Higuchi Y, Futamura N, Kanamori H, Katayose Y, Tsumura Y.

Breed Sci. 2019 Mar;69(1):19-29. doi: 10.1270/jsbbs.17149. Epub 2019 Feb 15.


Inferring the demographic history of Japanese cedar, Cryptomeria japonica, using amplicon sequencing.

Moriguchi N, Uchiyama K, Miyagi R, Moritsuka E, Takahashi A, Tamura K, Tsumura Y, Teshima KM, Tachida H, Kusumi J.

Heredity (Edinb). 2019 Sep;123(3):371-383. doi: 10.1038/s41437-019-0198-y. Epub 2019 Feb 26.


Fine mapping of the male-sterile genes (MS1, MS2, MS3, and MS4) and development of SNP markers for marker-assisted selection in Japanese cedar (Cryptomeria japonica D. Don).

Hasegawa Y, Ueno S, Matsumoto A, Ujino-Ihara T, Uchiyama K, Totsuka S, Iwai J, Hakamata T, Moriguchi Y.

PLoS One. 2018 Nov 15;13(11):e0206695. doi: 10.1371/journal.pone.0206695. eCollection 2018.


TodoFirGene: Developing Transcriptome Resources for Genetic Analysis of Abies sachalinensis.

Ueno S, Nakamura Y, Kobayashi M, Terashima S, Ishizuka W, Uchiyama K, Tsumura Y, Yano K, Goto S.

Plant Cell Physiol. 2018 Jun 1;59(6):1276-1284. doi: 10.1093/pcp/pcy058.


Comprehensive analysis of small RNAs expressed in developing male strobili of Cryptomeria japonica.

Ujino-Ihara T, Ueno S, Uchiyama K, Futamura N.

PLoS One. 2018 Mar 12;13(3):e0193665. doi: 10.1371/journal.pone.0193665. eCollection 2018.


Evidence of intense chromosomal shuffling during conifer evolution.

de Miguel M, Bartholomé J, Ehrenmann F, Murat F, Moriguchi Y, Uchiyama K, Ueno S, Tsumura Y, Lagraulet H, de Maria N, Cabezas JA, Cervera MT, Gion JM, Salse J, Plomion C.

Genome Biol Evol. 2015 Oct;7(10):2799-2809. Epub 2015 Sep 23.


Evidence for cryptic northern refugia in the last glacial period in Cryptomeria japonica.

Kimura MK, Uchiyama K, Nakao K, Moriguchi Y, San Jose-Maldia L, Tsumura Y.

Ann Bot. 2014 Dec;114(8):1687-700. doi: 10.1093/aob/mcu197. Epub 2014 Oct 29.


Genetic differentiation and evolutionary adaptation in Cryptomeria japonica.

Tsumura Y, Uchiyama K, Moriguchi Y, Kimura MK, Ueno S, Ujino-Ihara T.

G3 (Bethesda). 2014 Oct 14;4(12):2389-402. doi: 10.1534/g3.114.013896.


Demonstration of genome-wide association studies for identifying markers for wood property and male strobili traits in Cryptomeria japonica.

Uchiyama K, Iwata H, Moriguchi Y, Ujino-Ihara T, Ueno S, Taguchi Y, Tsubomura M, Mishima K, Iki T, Watanabe A, Futamura N, Shinohara K, Tsumura Y.

PLoS One. 2013 Nov 19;8(11):e79866. doi: 10.1371/journal.pone.0079866. eCollection 2013.


Influence of long-distance seed dispersal on the genetic diversity of seed rain in fragmented Pinus densiflora populations relative to pollen-mediated gene flow.

Ozawa H, Watanabe A, Uchiyama K, Saito Y, Ide Y.

J Hered. 2013 Jul-Aug;104(4):465-75. doi: 10.1093/jhered/est022. Epub 2013 Apr 23.


Development of 32 EST-SSR markers for Abies firma (Pinaceae) and their transferability to related species.

Uchiyama K, Fujii S, Ishizuka W, Goto S, Tsumura Y.

Appl Plant Sci. 2013 Jan 31;1(2). pii: apps.1200464. doi: 10.3732/apps.1200464. eCollection 2013 Feb.


A second generation framework for the analysis of microsatellites in expressed sequence tags and the development of EST-SSR markers for a conifer, Cryptomeria japonica.

Ueno S, Moriguchi Y, Uchiyama K, Ujino-Ihara T, Futamura N, Sakurai T, Shinohara K, Tsumura Y.

BMC Genomics. 2012 Apr 16;13:136. doi: 10.1186/1471-2164-13-136.


The construction of a high-density linkage map for identifying SNP markers that are tightly linked to a nuclear-recessive major gene for male sterility in Cryptomeria japonica D. Don.

Moriguchi Y, Ujino-Ihara T, Uchiyama K, Futamura N, Saito M, Ueno S, Matsumoto A, Tani N, Taira H, Shinohara K, Tsumura Y.

BMC Genomics. 2012 Mar 16;13:95. doi: 10.1186/1471-2164-13-95.


Development of EST-SSR markers for Elaeocarpus photiniifolia (Elaeocarpaceae), an endemic taxon of the Bonin Islands.

Sugai K, Setsuko S, Uchiyama K, Murakami N, Kato H, Yoshimaru H.

Am J Bot. 2012 Feb;99(2):e84-7. doi: 10.3732/ajb.1100391. Epub 2012 Jan 26.


Rapid development of microsatellite markers for Pandanus boninensis (Pandanaceae) by pyrosequencing technology.

Setsuko S, Uchiyama K, Sugai K, Yoshimaru H.

Am J Bot. 2012 Jan;99(1):e33-7. doi: 10.3732/ajb.1100300. Epub 2011 Dec 30.


Isolation and characterization of EST-SSR markers in Schima mertensiana (Theaceae) using pyrosequencing technology.

Setsuko S, Uchiyama K, Sugai K, Yoshimaru H.

Am J Bot. 2012 Jan;99(1):e38-42. doi: 10.3732/ajb.1100301. Epub 2011 Dec 30.


Extended linkage disequilibrium in noncoding regions in a conifer, Cryptomeria japonica.

Moritsuka E, Hisataka Y, Tamura M, Uchiyama K, Watanabe A, Tsumura Y, Tachida H.

Genetics. 2012 Mar;190(3):1145-8. doi: 10.1534/genetics.111.136697. Epub 2011 Dec 29.


Microsatellite markers derived from Calophyllum inophyllum (Clusiaceae) expressed sequence tags.

Setsuko S, Uchiyama K, Sugai K, Hanaoka S, Yoshimaru H.

Am J Bot. 2012 Jan;99(1):e28-32. doi: 10.3732/ajb.1100299. Epub 2011 Dec 27.


Isolation and characterization of 52 polymorphic EST-SSR markers for Callitris columellaris (Cupressaceae).

Sakaguchi S, Uchiyama K, Ueno S, Ujino-Ihara T, Tsumura Y, Prior LD, Bowman DM, Crisp MD, Isagi Y.

Am J Bot. 2011 Dec;98(12):e363-8. doi: 10.3732/ajb.1100276. Epub 2011 Nov 20.

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