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Items: 1 to 20 of 47

1.

Overview of Relaxation Dispersion NMR Spectroscopy to Study Protein Dynamics and Protein-Ligand Interactions.

Walinda E, Morimoto D, Sugase K.

Curr Protoc Protein Sci. 2018 Apr;92(1):e57. doi: 10.1002/cpps.57.

PMID:
30040207
2.

Resolving biomolecular motion and interactions by R2 and R relaxation dispersion NMR.

Walinda E, Morimoto D, Sugase K.

Methods. 2018 Sep 15;148:28-38. doi: 10.1016/j.ymeth.2018.04.026. Epub 2018 Apr 26. Review.

PMID:
29704666
3.

Isolation and characterization of a minimal building block of polyubiquitin fibrils.

Morimoto D, Walinda E, Shinke M, Sugase K, Shirakawa M.

Sci Rep. 2018 Feb 9;8(1):2711. doi: 10.1038/s41598-018-21144-z.

4.

Real-Time Observation of the Interaction between Thioflavin T and an Amyloid Protein by Using High-Sensitivity Rheo-NMR.

Iwakawa N, Morimoto D, Walinda E, Kawata Y, Shirakawa M, Sugase K.

Int J Mol Sci. 2017 Oct 28;18(11). pii: E2271. doi: 10.3390/ijms18112271.

5.

Elucidation of potential sites for antibody engineering by fluctuation editing.

Yanaka S, Moriwaki Y, Tsumoto K, Sugase K.

Sci Rep. 2017 Aug 30;7(1):9597. doi: 10.1038/s41598-017-10246-9.

6.

High-Sensitivity Rheo-NMR Spectroscopy for Protein Studies.

Morimoto D, Walinda E, Iwakawa N, Nishizawa M, Kawata Y, Yamamoto A, Shirakawa M, Scheler U, Sugase K.

Anal Chem. 2017 Jul 18;89(14):7286-7290. doi: 10.1021/acs.analchem.7b01816. Epub 2017 Jul 5.

7.

Exploration of the Conformational Dynamics of Major Histocompatibility Complex Molecules.

Yanaka S, Sugase K.

Front Immunol. 2017 May 29;8:632. doi: 10.3389/fimmu.2017.00632. eCollection 2017. Review.

8.

Biological and Physicochemical Functions of Ubiquitylation Revealed by Synthetic Chemistry Approaches.

Morimoto D, Walinda E, Sugase K, Shirakawa M.

Int J Mol Sci. 2017 May 27;18(6). pii: E1145. doi: 10.3390/ijms18061145. Review.

9.

F 1 F 2-selective NMR spectroscopy.

Walinda E, Morimoto D, Shirakawa M, Sugase K.

J Biomol NMR. 2017 May;68(1):41-52. doi: 10.1007/s10858-017-0113-x. Epub 2017 May 4.

PMID:
28474302
10.

Practical considerations for investigation of protein conformational dynamics by 15N R relaxation dispersion.

Walinda E, Morimoto D, Shirakawa M, Sugase K.

J Biomol NMR. 2017 Mar;67(3):201-209. doi: 10.1007/s10858-017-0097-6. Epub 2017 Feb 28.

PMID:
28243767
11.

Backbone resonance assignments of monomeric SOD1 in dilute and crowded environments.

Iwakawa N, Morimoto D, Walinda E, Sugase K, Shirakawa M.

Biomol NMR Assign. 2017 Apr;11(1):81-84. doi: 10.1007/s12104-016-9724-5. Epub 2016 Dec 26.

PMID:
28025808
12.

Ubiquitylation Directly Induces Fold Destabilization of Proteins.

Morimoto D, Walinda E, Fukada H, Sugase K, Shirakawa M.

Sci Rep. 2016 Dec 19;6:39453. doi: 10.1038/srep39453.

13.

The helical propensity of the extracellular loop is responsible for the substrate specificity of Fe(III)-phytosiderophore transporters.

Harada E, Sugase K, Namba K, Murata Y.

FEBS Lett. 2016 Dec;590(24):4617-4627. doi: 10.1002/1873-3468.12482. Epub 2016 Nov 23.

14.

Dynamics of the Extended String-Like Interaction of TFIIE with the p62 Subunit of TFIIH.

Okuda M, Higo J, Komatsu T, Konuma T, Sugase K, Nishimura Y.

Biophys J. 2016 Sep 6;111(5):950-62. doi: 10.1016/j.bpj.2016.07.042.

15.

Quantitative analysis of protein-ligand interactions by NMR.

Furukawa A, Konuma T, Yanaka S, Sugase K.

Prog Nucl Magn Reson Spectrosc. 2016 Aug;96:47-57. doi: 10.1016/j.pnmrs.2016.02.002. Epub 2016 Mar 3. Review.

PMID:
27573180
16.

Dual Function of Phosphoubiquitin in E3 Activation of Parkin.

Walinda E, Morimoto D, Sugase K, Shirakawa M.

J Biol Chem. 2016 Aug 5;291(32):16879-91. doi: 10.1074/jbc.M116.728600. Epub 2016 Jun 9.

17.

Efficient identification and analysis of chemical exchange in biomolecules by R1ρ relaxation dispersion with Amaterasu.

Walinda E, Morimoto D, Nishizawa M, Shirakawa M, Sugase K.

Bioinformatics. 2016 Aug 15;32(16):2539-41. doi: 10.1093/bioinformatics/btw188. Epub 2016 Apr 8.

PMID:
27153625
18.

Use of glass capillaries to suppress thermal convection in NMR tubes in diffusion measurements.

Iwashita T, Konuma T, Harada E, Mori S, Sugase K.

Magn Reson Chem. 2016 Apr 12. doi: 10.1002/mrc.4437. [Epub ahead of print]

PMID:
27072530
19.

Haem-dependent dimerization of PGRMC1/Sigma-2 receptor facilitates cancer proliferation and chemoresistance.

Kabe Y, Nakane T, Koike I, Yamamoto T, Sugiura Y, Harada E, Sugase K, Shimamura T, Ohmura M, Muraoka K, Yamamoto A, Uchida T, Iwata S, Yamaguchi Y, Krayukhina E, Noda M, Handa H, Ishimori K, Uchiyama S, Kobayashi T, Suematsu M.

Nat Commun. 2016 Mar 18;7:11030. doi: 10.1038/ncomms11030.

20.

Extracting protein dynamics information from overlapped NMR signals using relaxation dispersion difference NMR spectroscopy.

Konuma T, Harada E, Sugase K.

J Biomol NMR. 2015 Dec;63(4):367-373. doi: 10.1007/s10858-015-9995-7. Epub 2015 Oct 17.

PMID:
26476958

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