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Items: 1 to 20 of 43

1.

Genome-wide analysis of DNA methylation profile identifies differentially methylated loci associated with human intervertebral disc degeneration.

Ikuno A, Akeda K, Takebayashi SI, Shimaoka M, Okumura K, Sudo A.

PLoS One. 2019 Sep 12;14(9):e0222188. doi: 10.1371/journal.pone.0222188. eCollection 2019.

2.

Correction: Depletion of mRNA export regulator DBP5/DDX19, GLE1 or IPPK that is a key enzyme for the production of IP6, resulting in differentially altered cytoplasmic mRNA expression and specific cell defect.

Okamura M, Yamanaka Y, Shigemoto M, Kitadani Y, Kobayashi Y, Kambe T, Nagao M, Kobayashi I, Okumura K, Masuda S.

PLoS One. 2019 Jul 25;14(7):e0220511. doi: 10.1371/journal.pone.0220511. eCollection 2019.

3.

Genome-wide stability of the DNA replication program in single mammalian cells.

Takahashi S, Miura H, Shibata T, Nagao K, Okumura K, Ogata M, Obuse C, Takebayashi SI, Hiratani I.

Nat Genet. 2019 Mar;51(3):529-540. doi: 10.1038/s41588-019-0347-5. Epub 2019 Feb 25.

PMID:
30804559
4.

Mapping mammalian replication domains using the ion torrent semiconductor sequencing platform.

Takebayashi SI, Ogata S, Ogata M, Okumura K.

Biosci Biotechnol Biochem. 2018 Dec;82(12):2098-2100. doi: 10.1080/09168451.2018.1515617. Epub 2018 Sep 10.

PMID:
30198402
5.

Depletion of mRNA export regulator DBP5/DDX19, GLE1 or IPPK that is a key enzyme for the production of IP6, resulting in differentially altered cytoplasmic mRNA expression and specific cell defect.

Okamura M, Yamanaka Y, Shigemoto M, Kitadani Y, Kobayashi Y, Kambe T, Nagao M, Kobayashi I, Okumura K, Masuda S.

PLoS One. 2018 May 10;13(5):e0197165. doi: 10.1371/journal.pone.0197165. eCollection 2018. Erratum in: PLoS One. 2019 Jul 25;14(7):e0220511.

6.

The CDK-PLK1 axis targets the DNA damage checkpoint sensor protein RAD9 to promote cell proliferation and tolerance to genotoxic stress.

Wakida T, Ikura M, Kuriya K, Ito S, Shiroiwa Y, Habu T, Kawamoto T, Okumura K, Ikura T, Furuya K.

Elife. 2017 Dec 19;6. pii: e29953. doi: 10.7554/eLife.29953.

7.

The Mcm2-7-interacting domain of human mini-chromosome maintenance 10 (Mcm10) protein is important for stable chromatin association and origin firing.

Izumi M, Mizuno T, Yanagi KI, Sugimura K, Okumura K, Imamoto N, Abe T, Hanaoka F.

J Biol Chem. 2017 Aug 4;292(31):13008-13021. doi: 10.1074/jbc.M117.779371. Epub 2017 Jun 22.

8.

Anatomy of Mammalian Replication Domains.

Takebayashi SI, Ogata M, Okumura K.

Genes (Basel). 2017 Mar 28;8(4). pii: E110. doi: 10.3390/genes8040110. Review.

9.

Ginger hexane extract suppresses RANKL-induced osteoclast differentiation.

Ito S, Ohmi A, Sakamiya A, Yano T, Okumura K, Nishimura N, Kagontani K.

Biosci Biotechnol Biochem. 2016;80(4):779-85. doi: 10.1080/09168451.2015.1127133. Epub 2016 Feb 1.

PMID:
26967638
10.

Direct visualization of replication dynamics in early zebrafish embryos.

Kuriya K, Higashiyama E, Avşar-Ban E, Okochi N, Hattori K, Ogata S, Takebayashi S, Ogata M, Tamaru Y, Okumura K.

Biosci Biotechnol Biochem. 2016 May;80(5):945-8. doi: 10.1080/09168451.2016.1141039. Epub 2016 Feb 29.

PMID:
26923175
11.

Direct Visualization of DNA Replication Dynamics in Zebrafish Cells.

Kuriya K, Higashiyama E, Avşar-Ban E, Tamaru Y, Ogata S, Takebayashi S, Ogata M, Okumura K.

Zebrafish. 2015 Dec;12(6):432-9. doi: 10.1089/zeb.2015.1151. Epub 2015 Nov 5.

PMID:
26540100
12.

Transcriptional characteristics and differences in Arabidopsis stigmatic papilla cells pre- and post-pollination.

Matsuda T, Matsushima M, Nabemoto M, Osaka M, Sakazono S, Masuko-Suzuki H, Takahashi H, Nakazono M, Iwano M, Takayama S, Shimizu KK, Okumura K, Suzuki G, Watanabe M, Suwabe K.

Plant Cell Physiol. 2015 Apr;56(4):663-73. doi: 10.1093/pcp/pcu209. Epub 2014 Dec 19.

13.

A single-molecule approach to DNA replication in Escherichia coli cells demonstrated that DNA polymerase III is a major determinant of fork speed.

Pham TM, Tan KW, Sakumura Y, Okumura K, Maki H, Akiyama MT.

Mol Microbiol. 2013 Nov;90(3):584-96. doi: 10.1111/mmi.12386. Epub 2013 Sep 18.

14.

The histone chaperone facilitates chromatin transcription (FACT) protein maintains normal replication fork rates.

Abe T, Sugimura K, Hosono Y, Takami Y, Akita M, Yoshimura A, Tada S, Nakayama T, Murofushi H, Okumura K, Takeda S, Horikoshi M, Seki M, Enomoto T.

J Biol Chem. 2011 Sep 2;286(35):30504-12. doi: 10.1074/jbc.M111.264721. Epub 2011 Jul 7.

15.

Adipocyte-derived microvesicles contain RNA that is transported into macrophages and might be secreted into blood circulation.

Ogawa R, Tanaka C, Sato M, Nagasaki H, Sugimura K, Okumura K, Nakagawa Y, Aoki N.

Biochem Biophys Res Commun. 2010 Aug 6;398(4):723-9. doi: 10.1016/j.bbrc.2010.07.008. Epub 2010 Jul 17.

PMID:
20621060
16.

Cell cycle-dependent accumulation of histone H3.3 and euchromatic histone modifications in pericentromeric heterochromatin in response to a decrease in DNA methylation levels.

Sugimura K, Fukushima Y, Ishida M, Ito S, Nakamura M, Mori Y, Okumura K.

Exp Cell Res. 2010 Oct 15;316(17):2731-46. doi: 10.1016/j.yexcr.2010.06.016. Epub 2010 Jun 25.

PMID:
20599948
17.

Diagnosis and discrimination of autoimmune Graves' disease and Hashimoto's disease using thyroid-stimulating hormone receptor-containing recombinant proteoliposomes.

Fukushima H, Matsuo H, Imamura K, Morino K, Okumura K, Tsumoto K, Yoshimura T.

J Biosci Bioeng. 2009 Dec;108(6):551-6. doi: 10.1016/j.jbiosc.2009.06.006.

PMID:
19914592
18.

Demonstration and characterization of the heterodimerization of ZnT5 and ZnT6 in the early secretory pathway.

Fukunaka A, Suzuki T, Kurokawa Y, Yamazaki T, Fujiwara N, Ishihara K, Migaki H, Okumura K, Masuda S, Yamaguchi-Iwai Y, Nagao M, Kambe T.

J Biol Chem. 2009 Nov 6;284(45):30798-806. doi: 10.1074/jbc.M109.026435. Epub 2009 Sep 15.

19.

Cyclin A-Cdk1 regulates the origin firing program in mammalian cells.

Katsuno Y, Suzuki A, Sugimura K, Okumura K, Zineldeen DH, Shimada M, Niida H, Mizuno T, Hanaoka F, Nakanishi M.

Proc Natl Acad Sci U S A. 2009 Mar 3;106(9):3184-9. doi: 10.1073/pnas.0809350106. Epub 2009 Feb 12.

20.

Induction of differentiation in k562 cell line by nicotinic acid-related compounds.

Ida C, Ogata S, Okumura K, Taguchi H.

Biosci Biotechnol Biochem. 2009 Jan;73(1):79-84. Epub 2009 Jan 7.

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