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Items: 1 to 20 of 63

1.

Evolution of nodal and nodal-related genes and the putative composition of the heterodimers that trigger the nodal pathway in vertebrates.

Opazo JC, Kuraku S, Zavala K, Toloza-Villalobos J, Hoffmann FG.

Evol Dev. 2019 Jul;21(4):205-217. doi: 10.1111/ede.12292. Epub 2019 Jun 17.

PMID:
31210006
2.

The Reprimo gene family member, reprimo-like (rprml), is required for blood development in embryonic zebrafish.

Stanic K, Reig G, Wichmann IA, Opazo JC, Owen GI, Corvalán AH, Concha ML, Amigo JD.

Sci Rep. 2019 May 9;9(1):7131. doi: 10.1038/s41598-019-43436-8.

3.

Phylogenetic evidence for independent origins of GDF1 and GDF3 genes in anurans and mammals.

Opazo JC, Zavala K.

Sci Rep. 2018 Sep 11;8(1):13595. doi: 10.1038/s41598-018-31954-w.

4.

The Reprimo Gene Family: A Novel Gene Lineage in Gastric Cancer with Tumor Suppressive Properties.

Amigo JD, Opazo JC, Jorquera R, Wichmann IA, Garcia-Bloj BA, Alarcon MA, Owen GI, Corvalán AH.

Int J Mol Sci. 2018 Jun 25;19(7). pii: E1862. doi: 10.3390/ijms19071862. Review.

5.

An association between differential expression and genetic divergence in the Patagonian olive mouse (Abrothrix olivacea).

Giorello FM, Feijoo M, D'Elía G, Naya DE, Valdez L, Opazo JC, Lessa EP.

Mol Ecol. 2018 Jun 25. doi: 10.1111/mec.14778. [Epub ahead of print]

PMID:
29940092
6.

Evolution of dopamine receptors: phylogenetic evidence suggests a later origin of the DRD2l and DRD4rs dopamine receptor gene lineages.

Opazo JC, Zavala K, Miranda-Rottmann S, Araya R.

PeerJ. 2018 Apr 13;6:e4593. doi: 10.7717/peerj.4593. eCollection 2018.

7.

Expression of RPRM/rprm in the Olfactory System of Embryonic Zebrafish (Danio rerio).

Stanic K, Quiroz A, Lemus CG, Wichmann IA, Corvalán AH, Owen GI, Opazo JC, Concha ML, Amigo JD.

Front Neuroanat. 2018 Mar 27;12:23. doi: 10.3389/fnana.2018.00023. eCollection 2018.

8.

Gene Turnover and Diversification of the α- and β-Globin Gene Families in Sauropsid Vertebrates.

Hoffmann FG, Vandewege MW, Storz JF, Opazo JC.

Genome Biol Evol. 2018 Jan 1;10(1):344-358. doi: 10.1093/gbe/evy001.

9.

Progressive erosion of the Relaxin1 gene in bovids.

Malone L, Opazo JC, Ryan PL, Hoffmann FG.

Gen Comp Endocrinol. 2017 Oct 1;252:12-17. doi: 10.1016/j.ygcen.2017.07.011. Epub 2017 Jul 19.

PMID:
28733228
10.

Evolution of the α2-adrenoreceptors in vertebrates: ADRA2D is absent in mammals and crocodiles.

Céspedes HA, Zavala K, Vandewege MW, Opazo JC.

Gen Comp Endocrinol. 2017 Sep 1;250:85-94. doi: 10.1016/j.ygcen.2017.06.006. Epub 2017 Jun 13.

PMID:
28622977
11.

Reprimo tissue-specific expression pattern is conserved between zebrafish and human.

Figueroa RJ, Carrasco-Avino G, Wichmann IA, Lange M, Owen GI, Siekmann AF, Corvalán AH, Opazo JC, Amigo JD.

PLoS One. 2017 May 31;12(5):e0178274. doi: 10.1371/journal.pone.0178274. eCollection 2017.

12.

Evolution of gremlin 2 in cetartiodactyl mammals: gene loss coincides with lack of upper jaw incisors in ruminants.

Opazo JC, Zavala K, Krall P, Arias RA.

PeerJ. 2017 Jan 26;5:e2901. doi: 10.7717/peerj.2901. eCollection 2017.

13.

Evolution of the β-adrenoreceptors in vertebrates.

Zavala K, Vandewege MW, Hoffmann FG, Opazo JC.

Gen Comp Endocrinol. 2017 Jan 1;240:129-137. doi: 10.1016/j.ygcen.2016.10.005. Epub 2016 Oct 18.

PMID:
27769631
14.

Evolutionary history of the reprimo tumor suppressor gene family in vertebrates with a description of a new reprimo gene lineage.

Wichmann IA, Zavala K, Hoffmann FG, Vandewege MW, Corvalán AH, Amigo JD, Owen GI, Opazo JC.

Gene. 2016 Oct 10;591(1):245-254. doi: 10.1016/j.gene.2016.07.036. Epub 2016 Jul 16.

PMID:
27432065
15.

Lineage-Specific Expansion of the Chalcone Synthase Gene Family in Rosids.

Zavala K, Opazo JC.

PLoS One. 2015 Jul 16;10(7):e0133400. doi: 10.1371/journal.pone.0133400. eCollection 2015.

16.

Characterization of the kidney transcriptome of the long-haired mouse Abrothrix hirta (Rodentia, Sigmodontinae) and comparison with that of the olive mouse A. olivacea.

Valdez L, Giorello F, Feijoo M, Opazo JC, Lessa EP, Naya DE, D'Elía G.

PLoS One. 2015 Apr 10;10(4):e0121148. doi: 10.1371/journal.pone.0121148. eCollection 2015.

17.

Ancient Duplications and Expression Divergence in the Globin Gene Superfamily of Vertebrates: Insights from the Elephant Shark Genome and Transcriptome.

Opazo JC, Lee AP, Hoffmann FG, Toloza-Villalobos J, Burmester T, Venkatesh B, Storz JF.

Mol Biol Evol. 2015 Jul;32(7):1684-94. doi: 10.1093/molbev/msv054. Epub 2015 Mar 4.

18.

Phylogenomic analyses data of the avian phylogenomics project.

Jarvis ED, Mirarab S, Aberer AJ, Li B, Houde P, Li C, Ho SY, Faircloth BC, Nabholz B, Howard JT, Suh A, Weber CC, da Fonseca RR, Alfaro-Núñez A, Narula N, Liu L, Burt D, Ellegren H, Edwards SV, Stamatakis A, Mindell DP, Cracraft J, Braun EL, Warnow T, Jun W, Gilbert MT, Zhang G; Avian Phylogenomics Consortium.

Gigascience. 2015 Feb 12;4:4. doi: 10.1186/s13742-014-0038-1. eCollection 2015.

19.

Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs.

Green RE, Braun EL, Armstrong J, Earl D, Nguyen N, Hickey G, Vandewege MW, St John JA, Capella-Gutiérrez S, Castoe TA, Kern C, Fujita MK, Opazo JC, Jurka J, Kojima KK, Caballero J, Hubley RM, Smit AF, Platt RN, Lavoie CA, Ramakodi MP, Finger JW Jr, Suh A, Isberg SR, Miles L, Chong AY, Jaratlerdsiri W, Gongora J, Moran C, Iriarte A, McCormack J, Burgess SC, Edwards SV, Lyons E, Williams C, Breen M, Howard JT, Gresham CR, Peterson DG, Schmitz J, Pollock DD, Haussler D, Triplett EW, Zhang G, Irie N, Jarvis ED, Brochu CA, Schmidt CJ, McCarthy FM, Faircloth BC, Hoffmann FG, Glenn TC, Gabaldón T, Paten B, Ray DA.

Science. 2014 Dec 12;346(6215):1254449. doi: 10.1126/science.1254449. Epub 2014 Dec 11.

20.

Comparative genomics reveals insights into avian genome evolution and adaptation.

Zhang G, Li C, Li Q, Li B, Larkin DM, Lee C, Storz JF, Antunes A, Greenwold MJ, Meredith RW, Ödeen A, Cui J, Zhou Q, Xu L, Pan H, Wang Z, Jin L, Zhang P, Hu H, Yang W, Hu J, Xiao J, Yang Z, Liu Y, Xie Q, Yu H, Lian J, Wen P, Zhang F, Li H, Zeng Y, Xiong Z, Liu S, Zhou L, Huang Z, An N, Wang J, Zheng Q, Xiong Y, Wang G, Wang B, Wang J, Fan Y, da Fonseca RR, Alfaro-Núñez A, Schubert M, Orlando L, Mourier T, Howard JT, Ganapathy G, Pfenning A, Whitney O, Rivas MV, Hara E, Smith J, Farré M, Narayan J, Slavov G, Romanov MN, Borges R, Machado JP, Khan I, Springer MS, Gatesy J, Hoffmann FG, Opazo JC, Håstad O, Sawyer RH, Kim H, Kim KW, Kim HJ, Cho S, Li N, Huang Y, Bruford MW, Zhan X, Dixon A, Bertelsen MF, Derryberry E, Warren W, Wilson RK, Li S, Ray DA, Green RE, O'Brien SJ, Griffin D, Johnson WE, Haussler D, Ryder OA, Willerslev E, Graves GR, Alström P, Fjeldså J, Mindell DP, Edwards SV, Braun EL, Rahbek C, Burt DW, Houde P, Zhang Y, Yang H, Wang J; Avian Genome Consortium, Jarvis ED, Gilbert MT, Wang J.

Science. 2014 Dec 12;346(6215):1311-20. doi: 10.1126/science.1251385. Epub 2014 Dec 11.

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