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Items: 1 to 20 of 35

1.

Author Correction: The evolutionary history of vertebrate RNA viruses.

Shi M, Lin XD, Chen X, Tian JH, Chen LJ, Li K, Wang W, Eden JS, Shen JJ, Liu L, Holmes EC, Zhang YZ.

Nature. 2018 Jun 26. doi: 10.1038/s41586-018-0310-0. [Epub ahead of print]

PMID:
29946168
2.

Viral discovery in the invasive Australian cane toad (Rhinella marina) using metatranscriptomic and genomic approaches.

Russo AG, Eden JS, Enosi Tuipulotu D, Shi M, Selechnik D, Shine R, Rollins LA, Holmes EC, White PA.

J Virol. 2018 Jun 13. pii: JVI.00768-18. doi: 10.1128/JVI.00768-18. [Epub ahead of print]

PMID:
29899109
3.

Virological Sampling of Inaccessible Wildlife with Drones.

Geoghegan JL, Pirotta V, Harvey E, Smith A, Buchmann JP, Ostrowski M, Eden JS, Harcourt R, Holmes EC.

Viruses. 2018 Jun 2;10(6). pii: E300. doi: 10.3390/v10060300.

4.

The evolutionary history of vertebrate RNA viruses.

Shi M, Lin XD, Chen X, Tian JH, Chen LJ, Li K, Wang W, Eden JS, Shen JJ, Liu L, Holmes EC, Zhang YZ.

Nature. 2018 Apr;556(7700):197-202. doi: 10.1038/s41586-018-0012-7. Epub 2018 Apr 4. Erratum in: Nature. 2018 Jun 26;:.

PMID:
29618816
5.

Emerging recombinant noroviruses identified by clinical and waste water screening.

Lun JH, Hewitt J, Sitabkhan A, Eden JS, Enosi Tuipulotu D, Netzler NE, Morrell L, Merif J, Jones R, Huang B, Warrilow D, Ressler KA, Ferson MJ, Dwyer DE, Kok J, Rawlinson WD, Deere D, Crosbie ND, White PA.

Emerg Microbes Infect. 2018 Mar 29;7(1):50. doi: 10.1038/s41426-018-0047-8.

6.

Correction: The paradox of HBV evolution as revealed from a 16th century mummy.

Patterson Ross Z, Klunk J, Fornaciari G, Giuffra V, Duchêne S, Duggan AT, Poinar D, Douglas MW, Eden JS, Holmes EC, Poinar HN.

PLoS Pathog. 2018 Feb 9;14(2):e1006887. doi: 10.1371/journal.ppat.1006887. eCollection 2018 Feb.

7.

The paradox of HBV evolution as revealed from a 16th century mummy.

Patterson Ross Z, Klunk J, Fornaciari G, Giuffra V, Duchêne S, Duggan AT, Poinar D, Douglas MW, Eden JS, Holmes EC, Poinar HN.

PLoS Pathog. 2018 Jan 4;14(1):e1006750. doi: 10.1371/journal.ppat.1006750. eCollection 2018 Jan. Erratum in: PLoS Pathog. 2018 Feb 9;14 (2):e1006887.

8.

The transmission dynamics and diversity of human metapneumovirus in Peru.

Pollett S, Trovão NS, Tan Y, Eden JS, Halpin RA, Bera J, Das SR, Wentworth D, Ocaña V, Mendocilla SM, Álvarez C, Calisto ME, Garcia J, Halsey E, Ampuero JS, Nelson MI, Leguia M.

Influenza Other Respir Viruses. 2018 Jul;12(4):508-513. doi: 10.1111/irv.12537. Epub 2018 Mar 30.

9.

Emergence and Adaptation of a Novel Highly Pathogenic H7N9 Influenza Virus in Birds and Humans from a 2013 Human-Infecting Low-Pathogenic Ancestor.

Qi W, Jia W, Liu D, Li J, Bi Y, Xie S, Li B, Hu T, Du Y, Xing L, Zhang J, Zhang F, Wei X, Eden JS, Li H, Tian H, Li W, Su G, Lao G, Xu C, Xu B, Liu W, Zhang G, Ren T, Holmes EC, Cui J, Shi W, Gao GF, Liao M.

J Virol. 2018 Jan 2;92(2). pii: e00921-17. doi: 10.1128/JVI.00921-17. Print 2018 Jan 15.

10.

Identification of Genetically Intact HIV-1 Proviruses in Specific CD4+ T Cells from Effectively Treated Participants.

Hiener B, Horsburgh BA, Eden JS, Barton K, Schlub TE, Lee E, von Stockenstrom S, Odevall L, Milush JM, Liegler T, Sinclair E, Hoh R, Boritz EA, Douek D, Fromentin R, Chomont N, Deeks SG, Hecht FM, Palmer S.

Cell Rep. 2017 Oct 17;21(3):813-822. doi: 10.1016/j.celrep.2017.09.081.

11.

Persistent infections in immunocompromised hosts are rarely sources of new pathogen variants.

Eden JS, Chisholm RH, Bull RA, White PA, Holmes EC, Tanaka MM.

Virus Evol. 2017 Jul 28;3(2):vex018. doi: 10.1093/ve/vex018. eCollection 2017 Jul.

12.

Reverse Engineering Field Isolates of Myxoma Virus Demonstrates that Some Gene Disruptions or Losses of Function Do Not Explain Virulence Changes Observed in the Field.

Liu J, Cattadori IM, Sim DG, Eden JS, Holmes EC, Read AF, Kerr PJ.

J Virol. 2017 Sep 27;91(20). pii: e01289-17. doi: 10.1128/JVI.01289-17. Print 2017 Oct 15.

13.

Emergent multisystemic Enterococcus infection threatens endangered Christmas Island reptile populations.

Rose K, Agius J, Hall J, Thompson P, Eden JS, Srivastava M, Tiernan B, Jenkins C, Phalen D.

PLoS One. 2017 Jul 20;12(7):e0181240. doi: 10.1371/journal.pone.0181240. eCollection 2017.

14.

Proposal for a unified classification system and nomenclature of lagoviruses.

Le Pendu J, Abrantes J, Bertagnoli S, Guitton JS, Le Gall-Reculé G, Lopes AM, Marchandeau S, Alda F, Almeida T, Célio AP, Bárcena J, Burmakina G, Blanco E, Calvete C, Cavadini P, Cooke B, Dalton K, Delibes Mateos M, Deptula W, Eden JS, Wang F, Ferreira CC, Ferreira P, Foronda P, Gonçalves D, Gavier-Widén D, Hall R, Hukowska-Szematowicz B, Kerr P, Kovaliski J, Lavazza A, Mahar J, Malogolovkin A, Marques RM, Marques S, Martin-Alonso A, Monterroso P, Moreno S, Mutze G, Neimanis A, Niedzwiedzka-Rystwej P, Peacock D, Parra F, Rocchi M, Rouco C, Ruvoën-Clouet N, Silva E, Silvério D, Strive T, Thompson G, Tokarz-Deptula B, Esteves P.

J Gen Virol. 2017 Jul;98(7):1658-1666. doi: 10.1099/jgv.0.000840. Epub 2017 Jul 17.

PMID:
28714849
15.

High-Resolution Metatranscriptomics Reveals the Ecological Dynamics of Mosquito-Associated RNA Viruses in Western Australia.

Shi M, Neville P, Nicholson J, Eden JS, Imrie A, Holmes EC.

J Virol. 2017 Aug 10;91(17). pii: e00680-17. doi: 10.1128/JVI.00680-17. Print 2017 Sep 1.

16.

Francisella tularensis ssp. holarctica in Ringtail Possums, Australia.

Eden JS, Rose K, Ng J, Shi M, Wang Q, Sintchenko V, Holmes EC.

Emerg Infect Dis. 2017 Jul;23(7):1198-1201. doi: 10.3201/eid2307.161863.

17.

Genomic and phenotypic characterization of myxoma virus from Great Britain reveals multiple evolutionary pathways distinct from those in Australia.

Kerr PJ, Cattadori IM, Rogers MB, Fitch A, Geber A, Liu J, Sim DG, Boag B, Eden JS, Ghedin E, Read AF, Holmes EC.

PLoS Pathog. 2017 Mar 2;13(3):e1006252. doi: 10.1371/journal.ppat.1006252. eCollection 2017 Mar.

18.

Redefining the invertebrate RNA virosphere.

Shi M, Lin XD, Tian JH, Chen LJ, Chen X, Li CX, Qin XC, Li J, Cao JP, Eden JS, Buchmann J, Wang W, Xu J, Holmes EC, Zhang YZ.

Nature. 2016 Nov 23. doi: 10.1038/nature20167. [Epub ahead of print]

PMID:
27880757
19.

Benign Rabbit Caliciviruses Exhibit Evolutionary Dynamics Similar to Those of Their Virulent Relatives.

Mahar JE, Nicholson L, Eden JS, Duchêne S, Kerr PJ, Duckworth J, Ward VK, Holmes EC, Strive T.

J Virol. 2016 Sep 29;90(20):9317-29. doi: 10.1128/JVI.01212-16. Print 2016 Oct 15.

20.

Cross-validation to select Bayesian hierarchical models in phylogenetics.

Duchêne S, Duchêne DA, Di Giallonardo F, Eden JS, Geoghegan JL, Holt KE, Ho SY, Holmes EC.

BMC Evol Biol. 2016 May 26;16(1):115. doi: 10.1186/s12862-016-0688-y.

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