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Items: 1 to 20 of 763

1.

Quantitative In Vivo Proteomics of Metformin Response in Liver Reveals AMPK-Dependent and -Independent Signaling Networks.

Stein BD, Calzolari D, Hellberg K, Hu YS, He L, Hung CM, Toyama EQ, Ross DS, Lillemeier BF, Cantley LC, Yates JR 3rd, Shaw RJ.

Cell Rep. 2019 Dec 3;29(10):3331-3348.e7. doi: 10.1016/j.celrep.2019.10.117.

PMID:
31801093
2.

The KLDpT activation loop motif is critical for MARK kinase activity.

Sonntag T, Moresco JJ, Yates JR 3rd, Montminy M.

PLoS One. 2019 Dec 3;14(12):e0225727. doi: 10.1371/journal.pone.0225727. eCollection 2019.

3.

Integrative proteomics and pharmacogenomics analysis of methylphenidate treatment response.

da Silva BS, Leffa DT, Beys-da-Silva WO, Torres ILS, Rovaris DL, Victor MM, Rohde LA, Mota NR, Oliveira C, Berger M, Yates JR 3rd, Sabnis R, Peña RD, Campos AR, Grevet EH, Santi L, Bau CHD, Contini V.

Transl Psychiatry. 2019 Nov 18;9(1):308. doi: 10.1038/s41398-019-0649-5.

4.

Function of the MYND domain and C-terminal region in regulating the subcellular localization and catalytic activity of the SMYD family lysine methyltransferase Set5.

Jaiswal D, Turniansky R, Moresco JJ, Ikram S, Ramaprasad G, Akinwole A, Wolf J, Yates JR 3rd, Green EM.

Mol Cell Biol. 2019 Nov 4. pii: MCB.00341-19. doi: 10.1128/MCB.00341-19. [Epub ahead of print]

PMID:
31685550
5.

Biochemical analysis of protein arginylation.

Wang J, Yates JR 3rd, Kashina A.

Methods Enzymol. 2019;626:89-113. doi: 10.1016/bs.mie.2019.07.028. Epub 2019 Aug 1.

PMID:
31606094
6.

Tandem Mass Tag Proteomic Analysis of in Vitro and in Vivo Models of Cutaneous Leishmaniasis Reveals Parasite-Specific and Nonspecific Modulation of Proteins in the Host.

Negrão F, Diedrich JK, Giorgio S, Eberlin MN, Yates JR 3rd.

ACS Infect Dis. 2019 Oct 24. doi: 10.1021/acsinfecdis.9b00275. [Epub ahead of print]

PMID:
31600437
7.

Long-term cognitive outcomes in tuberous sclerosis complex.

Tye C, Mcewen FS, Liang H, Underwood L, Woodhouse E, Barker ED, Sheerin F, Yates JRW, Bolton PF; Tuberous Sclerosis 2000 Study Group.

Dev Med Child Neurol. 2019 Sep 19. doi: 10.1111/dmcn.14356. [Epub ahead of print]

PMID:
31538337
8.

The interactome of 2-Cys peroxiredoxins in Plasmodium falciparum.

Brandstaedter C, Delahunty C, Schipper S, Rahlfs S, Yates JR 3rd, Becker K.

Sci Rep. 2019 Sep 19;9(1):13542. doi: 10.1038/s41598-019-49841-3.

9.

Proteomics of Rat Lungs Infected by Cryptococcus gattii Reveals a Potential Warburg-like Effect.

Rosa RL, Berger M, Santi L, Driemeier D, Barros Terraciano P, Campos AR, Guimarães JA, Vainstein MH, Yates JR 3rd, Beys-da-Silva WO.

J Proteome Res. 2019 Nov 1;18(11):3885-3895. doi: 10.1021/acs.jproteome.9b00326. Epub 2019 Sep 26.

PMID:
31502459
10.

O-GlcNAcase targets pyruvate kinase M2 to regulate tumor growth.

Singh JP, Qian K, Lee JS, Zhou J, Han X, Zhang B, Ong Q, Ni W, Jiang M, Ruan HB, Li MD, Zhang K, Ding Z, Lee P, Singh K, Wu J, Herzog RI, Kaech S, Wendel HG, Yates JR 3rd, Han W, Sherwin RS, Nie Y, Yang X.

Oncogene. 2019 Sep 9. doi: 10.1038/s41388-019-0975-3. [Epub ahead of print]

PMID:
31501520
11.

Ready for the journey: a comparative proteome profiling of porcine cauda epididymal fluid and spermatozoa.

Weber A, Argenti LE, de Souza APB, Santi L, Beys-da-Silva WO, Yates JR 3rd, Bustamante-Filho IC.

Cell Tissue Res. 2019 Aug 23. doi: 10.1007/s00441-019-03080-0. [Epub ahead of print]

PMID:
31444576
12.

The Retinal Ganglion Cell Transportome Identifies Proteins Transported to Axons and Presynaptic Compartments in the Visual System In Vivo.

Schiapparelli LM, Shah SH, Ma Y, McClatchy DB, Sharma P, Li J, Yates JR 3rd, Goldberg JL, Cline HT.

Cell Rep. 2019 Aug 13;28(7):1935-1947.e5. doi: 10.1016/j.celrep.2019.07.037.

13.

Recent trends of capillary electrophoresis-mass spectrometry in proteomics research.

Gomes FP, Yates JR 3rd.

Mass Spectrom Rev. 2019 Nov;38(6):445-460. doi: 10.1002/mas.21599. Epub 2019 Aug 12. Review.

PMID:
31407381
14.

Comparison of CRISPR Genomic Tagging for Affinity Purification and Endogenous Immunoprecipitation Coupled with Quantitative Mass Spectrometry To Identify the Dynamic AMPKα2 Interactome.

Stein BD, Herzig S, Martínez-Bartolomé S, Lavallée-Adam M, Shaw RJ, Yates JR 3rd.

J Proteome Res. 2019 Oct 4;18(10):3703-3714. doi: 10.1021/acs.jproteome.9b00378. Epub 2019 Sep 6.

PMID:
31398040
15.

Dataset supporting the proteomic differences found between excretion/secretion products from two isolates of Fasciola hepatica newly excysted juveniles (NEJ) derived from different snail hosts.

Di Maggio LS, Tirloni L, Pinto AFM, Diedrich JK, Yates JR 3rd, Carmona C, Berasain P, da Silva Vaz I Jr.

Data Brief. 2019 Jul 15;25:104272. doi: 10.1016/j.dib.2019.104272. eCollection 2019 Aug.

16.

Exosomes regulate neurogenesis and circuit assembly.

Sharma P, Mesci P, Carromeu C, McClatchy DR, Schiapparelli L, Yates JR 3rd, Muotri AR, Cline HT.

Proc Natl Acad Sci U S A. 2019 Aug 6;116(32):16086-16094. doi: 10.1073/pnas.1902513116. Epub 2019 Jul 18.

17.

Proteomics INTegrator (PINT): An Online Tool To Store, Query, and Visualize Large Proteomics Experiment Results.

Martínez-Bartolomé S, Bamberger TC, Lavallée-Adam M, McClatchy DB, Yates JR 3rd.

J Proteome Res. 2019 Aug 2;18(8):2999-3008. doi: 10.1021/acs.jproteome.8b00711. Epub 2019 Jul 1.

PMID:
31260318
18.

DNA replication acts as an error correction mechanism to maintain centromere identity by restricting CENP-A to centromeres.

Nechemia-Arbely Y, Miga KH, Shoshani O, Aslanian A, McMahon MA, Lee AY, Fachinetti D, Yates JR 3rd, Ren B, Cleveland DW.

Nat Cell Biol. 2019 Jun;21(6):743-754. doi: 10.1038/s41556-019-0331-4. Epub 2019 Jun 3.

PMID:
31160708
19.

Exploring protein myristoylation in Toxoplasma gondii.

Alonso AM, Turowski VR, Ruiz DM, Orelo BD, Moresco JJ, Yates JR 3rd, Corvi MM.

Exp Parasitol. 2019 Aug;203:8-18. doi: 10.1016/j.exppara.2019.05.007. Epub 2019 May 28.

PMID:
31150653
20.

Identification of new transmembrane proteins concentrated at the nuclear envelope using organellar proteomics of mesenchymal cells.

Cheng LC, Baboo S, Lindsay C, Brusman L, Martinez-Bartolomé S, Tapia O, Zhang X, Yates JR 3rd, Gerace L.

Nucleus. 2019 Dec;10(1):126-143. doi: 10.1080/19491034.2019.1618175.

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