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Items: 1 to 20 of 36


Quantitative proteomic study of arsenic treated mouse liver sinusoidal endothelial cells using a reverse super-SILAC method.

Li W, Zhang J, Lv Y, Sheibani N.

Biochem Biophys Res Commun. 2019 Jun 25;514(2):475-481. doi: 10.1016/j.bbrc.2019.04.172. Epub 2019 May 2.


Genomic and Transcriptomic Landscape of Triple-Negative Breast Cancers: Subtypes and Treatment Strategies.

Jiang YZ, Ma D, Suo C, Shi J, Xue M, Hu X, Xiao Y, Yu KD, Liu YR, Yu Y, Zheng Y, Li X, Zhang C, Hu P, Zhang J, Hua Q, Zhang J, Hou W, Ren L, Bao D, Li B, Yang J, Yao L, Zuo WJ, Zhao S, Gong Y, Ren YX, Zhao YX, Yang YS, Niu Z, Cao ZG, Stover DG, Verschraegen C, Kaklamani V, Daemen A, Benson JR, Takabe K, Bai F, Li DQ, Wang P, Shi L, Huang W, Shao ZM.

Cancer Cell. 2019 Mar 18;35(3):428-440.e5. doi: 10.1016/j.ccell.2019.02.001. Epub 2019 Mar 7.


Multidrug Resistance Protein 1 Deficiency Promotes Doxorubicin-Induced Ovarian Toxicity in Female Mice.

Wang Y, Liu M, Zhang J, Liu Y, Kopp M, Zheng W, Xiao S.

Toxicol Sci. 2018 May 1;163(1):279-292. doi: 10.1093/toxsci/kfy038.


Simple Assessment of Nitrogen Nutrition Index in Summer Maize by Using Chlorophyll Meter Readings.

Zhao B, Ata-Ul-Karim ST, Liu Z, Zhang J, Xiao J, Liu Z, Qin A, Ning D, Yang Q, Zhang Y, Duan A.

Front Plant Sci. 2018 Jan 19;9:11. doi: 10.3389/fpls.2018.00011. eCollection 2018.


A microfluidic culture model of the human reproductive tract and 28-day menstrual cycle.

Xiao S, Coppeta JR, Rogers HB, Isenberg BC, Zhu J, Olalekan SA, McKinnon KE, Dokic D, Rashedi AS, Haisenleder DJ, Malpani SS, Arnold-Murray CA, Chen K, Jiang M, Bai L, Nguyen CT, Zhang J, Laronda MM, Hope TJ, Maniar KP, Pavone ME, Avram MJ, Sefton EC, Getsios S, Burdette JE, Kim JJ, Borenstein JT, Woodruff TK.

Nat Commun. 2017 Mar 28;8:14584. doi: 10.1038/ncomms14584.


Doxorubicin Has Dose-Dependent Toxicity on Mouse Ovarian Follicle Development, Hormone Secretion, and Oocyte Maturation.

Xiao S, Zhang J, Liu M, Iwahata H, Rogers HB, Woodruff TK.

Toxicol Sci. 2017 Jun 1;157(2):320-329. doi: 10.1093/toxsci/kfx047.


Immunogenic HLA-DR-Presented Self-Peptides Identified Directly from Clinical Samples of Synovial Tissue, Synovial Fluid, or Peripheral Blood in Patients with Rheumatoid Arthritis or Lyme Arthritis.

Wang Q, Drouin EE, Yao C, Zhang J, Huang Y, Leon DR, Steere AC, Costello CE.

J Proteome Res. 2017 Jan 6;16(1):122-136. doi: 10.1021/acs.jproteome.6b00386. Epub 2016 Nov 7.


Quantitative and In-Depth Survey of the Isotopic Abundance Distribution Errors in Shotgun Proteomics.

Chang C, Zhang J, Xu C, Zhao Y, Ma J, Chen T, He F, Xie H, Zhu Y.

Anal Chem. 2016 Jul 5;88(13):6844-51. doi: 10.1021/acs.analchem.6b01409. Epub 2016 Jun 20.


In vitro follicle growth supports human oocyte meiotic maturation.

Xiao S, Zhang J, Romero MM, Smith KN, Shea LD, Woodruff TK.

Sci Rep. 2015 Nov 27;5:17323. doi: 10.1038/srep17323.


Identification and characterization of transcript variants of chicken peroxisome proliferator-activated receptor gamma.

Duan K, Sun Y, Zhang X, Zhang T, Zhang W, Zhang J, Wang G, Wang S, Leng L, Li H, Wang N.

Poult Sci. 2015 Oct;94(10):2516-27. doi: 10.3382/ps/pev229. Epub 2015 Aug 17.


Evaluation of empirical rule of linearly correlated peptide selection (ERLPS) for proteotypic peptide-based quantitative proteomics.

Liu K, Zhang J, Fu B, Xie H, Wang Y, Qian X.

Proteomics. 2014 Jul;14(13-14):1593-603. doi: 10.1002/pmic.201300032. Epub 2014 Jun 11.


SILVER: an efficient tool for stable isotope labeling LC-MS data quantitative analysis with quality control methods.

Chang C, Zhang J, Han M, Ma J, Zhang W, Wu S, Liu K, Xie H, He F, Zhu Y.

Bioinformatics. 2014 Feb 15;30(4):586-7. doi: 10.1093/bioinformatics/btt726. Epub 2013 Dec 15.


FTDR 2.0: a tool to achieve sub-ppm level recalibrated accuracy in routine LC-MS analysis.

Zhang J, Ma J, Zhang W, Xu C, Zhu Y, Xie H.

J Proteome Res. 2013 Sep 6;12(9):3857-64. doi: 10.1021/pr400003a. Epub 2013 Aug 7.


A proteomics strategy for the identification of FAT10-modified sites by mass spectrometry.

Leng L, Xu C, Wei C, Zhang J, Liu B, Ma J, Li N, Qin W, Zhang W, Zhang C, Xing X, Zhai L, Yang F, Li M, Jin C, Yuan Y, Xu P, Qin J, Xie H, He F, Wang J.

J Proteome Res. 2014 Jan 3;13(1):268-76. doi: 10.1021/pr400395k. Epub 2013 Aug 19.


An improved workflow for identifying ubiquitin/ubiquitin-like protein conjugation sites from tandem mass spectra.

Xu C, Zhang J, Zhang W, Liu H, Fang J, Xie H.

Proteomics. 2013 Sep;13(17):2579-84. doi: 10.1002/pmic.201300151. Epub 2013 Aug 9.


Proteome-wide prediction of self-interacting proteins based on multiple properties.

Liu Z, Guo F, Zhang J, Wang J, Lu L, Li D, He F.

Mol Cell Proteomics. 2013 Jun;12(6):1689-700. doi: 10.1074/mcp.M112.021790. Epub 2013 Feb 18.


Use of stem cell transplantation to treat epilepsy: A Web of Science-based literature analysis.

Yin Z, Dong Y, Zhang J, Wang L.

Neural Regen Res. 2012 Nov 25;7(33):2624-31. doi: 10.3969/j.issn.1673-5374.2012.33.008.


LFQuant: a label-free fast quantitative analysis tool for high-resolution LC-MS/MS proteomics data.

Zhang W, Zhang J, Xu C, Li N, Liu H, Ma J, Zhu Y, Xie H.

Proteomics. 2012 Dec;12(23-24):3475-84. doi: 10.1002/pmic.201200017.


PepDistiller: A quality control tool to improve the sensitivity and accuracy of peptide identifications in shotgun proteomics.

Li N, Wu S, Zhang C, Chang C, Zhang J, Ma J, Li L, Qian X, Xu P, Zhu Y, He F.

Proteomics. 2012 Jun;12(11):1720-5. doi: 10.1002/pmic.201100167.


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