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Items: 1 to 20 of 37

1.

eIF4G2 balances its own mRNA translation via a PCBP2-based feedback loop.

Smirnova VV, Shestakova ED, Bikmetov DV, Chugunova AA, Osterman IA, Serebryakova MV, Sergeeva OV, Zatsepin TS, Shatsky IN, Terenin IM.

RNA. 2019 Jul;25(7):757-767. doi: 10.1261/rna.065623.118. Epub 2019 Apr 22.

PMID:
31010886
2.

Cellular Gene Expression during Hepatitis C Virus Replication as Revealed by Ribosome Profiling.

Gerresheim GK, Bathke J, Michel AM, Andreev DE, Shalamova LA, Rossbach O, Hu P, Glebe D, Fricke M, Marz M, Goesmann A, Kiniry SJ, Baranov PV, Shatsky IN, Niepmann M.

Int J Mol Sci. 2019 Mar 15;20(6). pii: E1321. doi: 10.3390/ijms20061321.

3.

Translatome and transcriptome analysis of TMA20 (MCT-1) and TMA64 (eIF2D) knockout yeast strains.

Makeeva DS, Lando AS, Anisimova A, Egorov AA, Logacheva MD, Penin AA, Andreev DE, Sinitcyn PG, Terenin IM, Shatsky IN, Kulakovskiy IV, Dmitriev SE.

Data Brief. 2019 Feb 2;23:103701. doi: 10.1016/j.dib.2019.103701. eCollection 2019 Apr.

4.

A novel uORF-based regulatory mechanism controls translation of the human MDM2 and eIF2D mRNAs during stress.

Akulich KA, Sinitcyn PG, Makeeva DS, Andreev DE, Terenin IM, Anisimova AS, Shatsky IN, Dmitriev SE.

Biochimie. 2019 Feb;157:92-101. doi: 10.1016/j.biochi.2018.11.005. Epub 2018 Nov 9.

PMID:
30419262
5.

Tma64/eIF2D, Tma20/MCT-1, and Tma22/DENR Recycle Post-termination 40S Subunits In Vivo.

Young DJ, Makeeva DS, Zhang F, Anisimova AS, Stolboushkina EA, Ghobakhlou F, Shatsky IN, Dmitriev SE, Hinnebusch AG, Guydosh NR.

Mol Cell. 2018 Sep 6;71(5):761-774.e5. doi: 10.1016/j.molcel.2018.07.028. Epub 2018 Aug 23.

PMID:
30146315
6.

Cap-Independent Translation: What's in a Name?

Shatsky IN, Terenin IM, Smirnova VV, Andreev DE.

Trends Biochem Sci. 2018 Nov;43(11):882-895. doi: 10.1016/j.tibs.2018.04.011. Epub 2018 May 19. Review.

PMID:
29789219
7.

Eukaryotic translation elongation factor 2 (eEF2) catalyzes reverse translocation of the eukaryotic ribosome.

Susorov D, Zakharov N, Shuvalova E, Ivanov A, Egorova T, Shuvalov A, Shatsky IN, Alkalaeva E.

J Biol Chem. 2018 Apr 6;293(14):5220-5229. doi: 10.1074/jbc.RA117.000761. Epub 2018 Feb 16.

8.

Translation control of mRNAs encoding mammalian translation initiation factors.

Andreev DE, Dmitriev SE, Loughran G, Terenin IM, Baranov PV, Shatsky IN.

Gene. 2018 Apr 20;651:174-182. doi: 10.1016/j.gene.2018.02.013. Epub 2018 Feb 4. Review.

PMID:
29414693
9.

Insights into the mechanisms of eukaryotic translation gained with ribosome profiling.

Andreev DE, O'Connor PB, Loughran G, Dmitriev SE, Baranov PV, Shatsky IN.

Nucleic Acids Res. 2017 Jan 25;45(2):513-526. doi: 10.1093/nar/gkw1190. Epub 2016 Dec 6. Review.

10.

Four translation initiation pathways employed by the leaderless mRNA in eukaryotes.

Akulich KA, Andreev DE, Terenin IM, Smirnova VV, Anisimova AS, Makeeva DS, Arkhipova VI, Stolboushkina EA, Garber MB, Prokofjeva MM, Spirin PV, Prassolov VS, Shatsky IN, Dmitriev SE.

Sci Rep. 2016 Nov 28;6:37905. doi: 10.1038/srep37905.

11.

A researcher's guide to the galaxy of IRESs.

Terenin IM, Smirnova VV, Andreev DE, Dmitriev SE, Shatsky IN.

Cell Mol Life Sci. 2017 Apr;74(8):1431-1455. doi: 10.1007/s00018-016-2409-5. Epub 2016 Nov 16. Review.

PMID:
27853833
12.

Sliding of a 43S ribosomal complex from the recognized AUG codon triggered by a delay in eIF2-bound GTP hydrolysis.

Terenin IM, Akulich KA, Andreev DE, Polyanskaya SA, Shatsky IN, Dmitriev SE.

Nucleic Acids Res. 2016 Feb 29;44(4):1882-93. doi: 10.1093/nar/gkv1514. Epub 2015 Dec 29.

13.

Does HIV-1 mRNA 5'-untranslated region bear an internal ribosome entry site?

Smirnova VV, Terenin IM, Khutornenko AA, Andreev DE, Dmitriev SE, Shatsky IN.

Biochimie. 2016 Feb;121:228-37. doi: 10.1016/j.biochi.2015.12.004. Epub 2015 Dec 14.

PMID:
26700150
14.

Pros and cons of pDNA and mRNA transfection to study mRNA translation in mammalian cells.

Andreev DE, Terenin IM, Dmitriev SE, Shatsky IN.

Gene. 2016 Mar 1;578(1):1-6. doi: 10.1016/j.gene.2015.12.008. Epub 2015 Dec 8. Review.

PMID:
26680098
15.

Oxygen and glucose deprivation induces widespread alterations in mRNA translation within 20 minutes.

Andreev DE, O'Connor PB, Zhdanov AV, Dmitriev RI, Shatsky IN, Papkovsky DB, Baranov PV.

Genome Biol. 2015 May 6;16:90. doi: 10.1186/s13059-015-0651-z.

16.

Translation of 5' leaders is pervasive in genes resistant to eIF2 repression.

Andreev DE, O'Connor PB, Fahey C, Kenny EM, Terenin IM, Dmitriev SE, Cormican P, Morris DW, Shatsky IN, Baranov PV.

Elife. 2015 Jan 26;4:e03971. doi: 10.7554/eLife.03971.

17.

Transcriptome-wide studies uncover the diversity of modes of mRNA recruitment to eukaryotic ribosomes.

Shatsky IN, Dmitriev SE, Andreev DE, Terenin IM.

Crit Rev Biochem Mol Biol. 2014 Mar-Apr;49(2):164-77. doi: 10.3109/10409238.2014.887051. Epub 2014 Feb 13. Review.

PMID:
24520918
18.

HCV IRES interacts with the 18S rRNA to activate the 40S ribosome for subsequent steps of translation initiation.

Malygin AA, Kossinova OA, Shatsky IN, Karpova GG.

Nucleic Acids Res. 2013 Oct;41(18):8706-14. doi: 10.1093/nar/gkt632. Epub 2013 Jul 19.

19.

A novel mechanism of eukaryotic translation initiation that is neither m7G-cap-, nor IRES-dependent.

Terenin IM, Andreev DE, Dmitriev SE, Shatsky IN.

Nucleic Acids Res. 2013 Feb 1;41(3):1807-16. doi: 10.1093/nar/gks1282. Epub 2012 Dec 24.

20.

The 5' untranslated region of Apaf-1 mRNA directs translation under apoptosis conditions via a 5' end-dependent scanning mechanism.

Andreev DE, Dmitriev SE, Zinovkin R, Terenin IM, Shatsky IN.

FEBS Lett. 2012 Nov 30;586(23):4139-43. doi: 10.1016/j.febslet.2012.10.010. Epub 2012 Oct 17.

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