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Items: 14

1.

Tools and Strategies for Long-Read Sequencing and De Novo Assembly of Plant Genomes.

Jung H, Winefield C, Bombarely A, Prentis P, Waterhouse P.

Trends Plant Sci. 2019 Aug;24(8):700-724. doi: 10.1016/j.tplants.2019.05.003. Epub 2019 Jun 14. Review.

PMID:
31208890
2.

The Rise and Rise of Nicotiana benthamiana: A Plant for All Reasons.

Bally J, Jung H, Mortimer C, Naim F, Philips JG, Hellens R, Bombarely A, Goodin MM, Waterhouse PM.

Annu Rev Phytopathol. 2018 Aug 25;56:405-426. doi: 10.1146/annurev-phyto-080417-050141. Review.

PMID:
30149789
3.

In-Plant Protection against Helicoverpa armigera by Production of Long hpRNA in Chloroplasts.

Bally J, McIntyre GJ, Doran RL, Lee K, Perez A, Jung H, Naim F, Larrinua IM, Narva KE, Waterhouse PM.

Front Plant Sci. 2016 Sep 29;7:1453. eCollection 2016.

4.

Optimizing Hybrid de Novo Transcriptome Assembly and Extending Genomic Resources for Giant Freshwater Prawns (Macrobrachium rosenbergii): The Identification of Genes and Markers Associated with Reproduction.

Jung H, Yoon BH, Kim WJ, Kim DW, Hurwood DA, Lyons RE, Salin KR, Kim HS, Baek I, Chand V, Mather PB.

Int J Mol Sci. 2016 May 7;17(5). pii: E690. doi: 10.3390/ijms17050690.

5.

Evaluation of potential candidate genes involved in salinity tolerance in striped catfish (Pangasianodon hypophthalmus) using an RNA-Seq approach.

Nguyen TV, Jung H, Nguyen TM, Hurwood D, Mather P.

Mar Genomics. 2016 Feb;25:75-88. doi: 10.1016/j.margen.2015.11.010. Epub 2015 Dec 2.

PMID:
26653845
6.

Optimizing de novo transcriptome assembly and extending genomic resources for striped catfish (Pangasianodon hypophthalmus).

Thanh NM, Jung H, Lyons RE, Njaci I, Yoon BH, Chand V, Tuan NV, Thu VT, Mather P.

Mar Genomics. 2015 Oct;23:87-97. doi: 10.1016/j.margen.2015.05.001. Epub 2015 May 12.

PMID:
25979246
7.

The extremophile Nicotiana benthamiana has traded viral defence for early vigour.

Bally J, Nakasugi K, Jia F, Jung H, Ho SY, Wong M, Paul CM, Naim F, Wood CC, Crowhurst RN, Hellens RP, Dale JL, Waterhouse PM.

Nat Plants. 2015 Nov 2;1:15165. doi: 10.1038/nplants.2015.165.

PMID:
27251536
8.

A transcriptomic analysis of striped catfish (Pangasianodon hypophthalmus) in response to salinity adaptation: De novo assembly, gene annotation and marker discovery.

Thanh NM, Jung H, Lyons RE, Chand V, Tuan NV, Thu VT, Mather P.

Comp Biochem Physiol Part D Genomics Proteomics. 2014 Jun;10:52-63. doi: 10.1016/j.cbd.2014.04.001. Epub 2014 May 9.

PMID:
24841517
9.

A candidate gene association study for growth performance in an improved giant freshwater prawn (Macrobrachium rosenbergii ) culture line.

Jung H, Lyons RE, Li Y, Thanh NM, Dinh H, Hurwood DA, Salin KR, Mather PB.

Mar Biotechnol (NY). 2014 Apr;16(2):161-80.

PMID:
24122143
10.

Genome Sequence of Marine Bacterium Idiomarina sp. Strain 28-8, Isolated from Korean Ark Shells.

Kim WJ, Kim YO, Kim DG, Nam BH, Kong HJ, Jung H, Lee SJ, Kim DW, Kim DS, Chae SH.

Genome Announc. 2013 Oct 3;1(5). pii: e00772-13. doi: 10.1128/genomeA.00772-13.

11.

Molecular and functional characterizations of a Kunitz-type serine protease inhibitor FcKuSPI of the shrimp Fenneropenaeus chinensis.

Kong HJ, Lee YJ, Park IS, Lee WW, Kim YO, Nam BH, Kim WJ, Jung H, Jeon YJ, An CM, Lee SJ.

Fish Shellfish Immunol. 2013 Sep;35(3):1025-9. doi: 10.1016/j.fsi.2013.06.023. Epub 2013 Jun 27.

PMID:
23811353
12.

Analysis of genome survey sequences and SSR marker development for Siamese Mud Carp, Henicorhynchus siamensis, using 454 pyrosequencing.

Iranawati F, Jung H, Chand V, Hurwood DA, Mather PB.

Int J Mol Sci. 2012;13(9):10807-27. doi: 10.3390/ijms130910807. Epub 2012 Aug 29.

13.

Transcriptomics of a giant freshwater prawn (Macrobrachium rosenbergii): de novo assembly, annotation and marker discovery.

Jung H, Lyons RE, Dinh H, Hurwood DA, McWilliam S, Mather PB.

PLoS One. 2011;6(12):e27938. doi: 10.1371/journal.pone.0027938. Epub 2011 Dec 8.

14.

Development of type I genetic markers from expressed sequence tags in highly polymorphic species.

Kim WJ, Jung H, Gaffney PM.

Mar Biotechnol (NY). 2011 Apr;13(2):127-32. doi: 10.1007/s10126-010-9280-4. Epub 2010 Mar 23.

PMID:
20309599

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