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Items: 18

1.

Honeybee venom proteome profile of queens and winter bees as determined by a mass spectrometric approach.

Danneels EL, Van Vaerenbergh M, Debyser G, Devreese B, de Graaf DC.

Toxins (Basel). 2015 Oct 30;7(11):4468-83. doi: 10.3390/toxins7114468.

2.

Faecal proteomics: A tool to investigate dysbiosis and inflammation in patients with cystic fibrosis.

Debyser G, Mesuere B, Clement L, Van de Weygaert J, Van Hecke P, Duytschaever G, Aerts M, Dawyndt P, De Boeck K, Vandamme P, Devreese B.

J Cyst Fibros. 2016 Mar;15(2):242-50. doi: 10.1016/j.jcf.2015.08.003. Epub 2015 Aug 30.

PMID:
26330184
3.

Unraveling the venom proteome of the bumblebee (Bombus terrestris) by integrating a combinatorial peptide ligand library approach with FT-ICR MS.

Van Vaerenbergh M, Debyser G, Smagghe G, Devreese B, de Graaf DC.

Toxicon. 2015 Aug;102:81-8. doi: 10.1016/j.toxicon.2013.10.002. Epub 2015 Jun 10.

PMID:
26071081
4.

The genomes of two key bumblebee species with primitive eusocial organization.

Sadd BM, Barribeau SM, Bloch G, de Graaf DC, Dearden P, Elsik CG, Gadau J, Grimmelikhuijzen CJ, Hasselmann M, Lozier JD, Robertson HM, Smagghe G, Stolle E, Van Vaerenbergh M, Waterhouse RM, Bornberg-Bauer E, Klasberg S, Bennett AK, Câmara F, Guigó R, Hoff K, Mariotti M, Munoz-Torres M, Murphy T, Santesmasses D, Amdam GV, Beckers M, Beye M, Biewer M, Bitondi MM, Blaxter ML, Bourke AF, Brown MJ, Buechel SD, Cameron R, Cappelle K, Carolan JC, Christiaens O, Ciborowski KL, Clarke DF, Colgan TJ, Collins DH, Cridge AG, Dalmay T, Dreier S, du Plessis L, Duncan E, Erler S, Evans J, Falcon T, Flores K, Freitas FC, Fuchikawa T, Gempe T, Hartfelder K, Hauser F, Helbing S, Humann FC, Irvine F, Jermiin LS, Johnson CE, Johnson RM, Jones AK, Kadowaki T, Kidner JH, Koch V, Köhler A, Kraus FB, Lattorff HM, Leask M, Lockett GA, Mallon EB, Antonio DS, Marxer M, Meeus I, Moritz RF, Nair A, Näpflin K, Nissen I, Niu J, Nunes FM, Oakeshott JG, Osborne A, Otte M, Pinheiro DG, Rossié N, Rueppell O, Santos CG, Schmid-Hempel R, Schmitt BD, Schulte C, Simões ZL, Soares MP, Swevers L, Winnebeck EC, Wolschin F, Yu N, Zdobnov EM, Aqrawi PK, Blankenburg KP, Coyle M, Francisco L, Hernandez AG, Holder M, Hudson ME, Jackson L, Jayaseelan J, Joshi V, Kovar C, Lee SL, Mata R, Mathew T, Newsham IF, Ngo R, Okwuonu G, Pham C, Pu LL, Saada N, Santibanez J, Simmons D, Thornton R, Venkat A, Walden KK, Wu YQ, Debyser G, Devreese B, Asher C, Blommaert J, Chipman AD, Chittka L, Fouks B, Liu J, O'Neill MP, Sumner S, Puiu D, Qu J, Salzberg SL, Scherer SE, Muzny DM, Richards S, Robinson GE, Gibbs RA, Schmid-Hempel P, Worley KC.

Genome Biol. 2015 Apr 24;16:76. doi: 10.1186/s13059-015-0623-3.

5.

The Unipept metaproteomics analysis pipeline.

Mesuere B, Debyser G, Aerts M, Devreese B, Vandamme P, Dawyndt P.

Proteomics. 2015 Apr;15(8):1437-42. doi: 10.1002/pmic.201400361. Epub 2015 Feb 11.

PMID:
25477242
6.

Exploring the hidden honeybee (Apis mellifera) venom proteome by integrating a combinatorial peptide ligand library approach with FTMS.

Van Vaerenbergh M, Debyser G, Devreese B, de Graaf DC.

J Proteomics. 2014 Mar 17;99:169-78. doi: 10.1016/j.jprot.2013.04.039.

PMID:
24606962
7.

Finding the missing honey bee genes: lessons learned from a genome upgrade.

Elsik CG, Worley KC, Bennett AK, Beye M, Camara F, Childers CP, de Graaf DC, Debyser G, Deng J, Devreese B, Elhaik E, Evans JD, Foster LJ, Graur D, Guigo R; HGSC production teams, Hoff KJ, Holder ME, Hudson ME, Hunt GJ, Jiang H, Joshi V, Khetani RS, Kosarev P, Kovar CL, Ma J, Maleszka R, Moritz RF, Munoz-Torres MC, Murphy TD, Muzny DM, Newsham IF, Reese JT, Robertson HM, Robinson GE, Rueppell O, Solovyev V, Stanke M, Stolle E, Tsuruda JM, Vaerenbergh MV, Waterhouse RM, Weaver DB, Whitfield CW, Wu Y, Zdobnov EM, Zhang L, Zhu D, Gibbs RA; Honey Bee Genome Sequencing Consortium.

BMC Genomics. 2014 Jan 30;15:86. doi: 10.1186/1471-2164-15-86.

8.

Unipept: tryptic peptide-based biodiversity analysis of metaproteome samples.

Mesuere B, Devreese B, Debyser G, Aerts M, Vandamme P, Dawyndt P.

J Proteome Res. 2012 Dec 7;11(12):5773-80. doi: 10.1021/pr300576s. Epub 2012 Nov 26.

PMID:
23153116
9.

The cDNA sequence of three hemocyanin subunits from the garden snail Helix lucorum.

De Smet L, Dimitrov I, Debyser G, Dolashka-Angelova P, Dolashki A, Van Beeumen J, Devreese B.

Gene. 2011 Nov 10;487(2):118-28. doi: 10.1016/j.gene.2011.07.030. Epub 2011 Aug 7.

PMID:
21851852
10.

PTPBR7 binding proteins in myelinating neurons of the mouse brain.

Chesini IM, Debyser G, Croes H, Ten Dam GB, Devreese B, Stoker AW, Hendriks WJ.

Int J Biol Sci. 2011;7(7):978-91. Epub 2011 Aug 9.

11.

A proteome map of the pituitary melanotrope cell activated by black-background adaptation of Xenopus laevis.

Devreese B, Sergeant K, Van Bakel NH, Debyser G, Van Beeumen J, Martens GJ, Van Herp F.

Proteomics. 2010 Feb;10(3):574-80. doi: 10.1002/pmic.200900281.

PMID:
20029839
12.

Resistance of the dopamine D4 receptor to agonist-induced internalization and degradation.

Spooren A, Rondou P, Debowska K, Lintermans B, Vermeulen L, Samyn B, Skieterska K, Debyser G, Devreese B, Vanhoenacker P, Wojda U, Haegeman G, Van Craenenbroeck K.

Cell Signal. 2010 Apr;22(4):600-9. doi: 10.1016/j.cellsig.2009.11.013. Epub 2009 Nov 20.

PMID:
19932171
13.

Multiplicity of aspartic proteinases from Cynara cardunculus L.

Sarmento AC, Lopes H, Oliveira CS, Vitorino R, Samyn B, Sergeant K, Debyser G, Van Beeumen J, Domingues P, Amado F, Pires E, Domingues MR, Barros MT.

Planta. 2009 Jul;230(2):429-39. doi: 10.1007/s00425-009-0948-9. Epub 2009 Jun 2.

PMID:
19488781
14.

Variability of polymorphic families of three types of xylanase inhibitors in the wheat grain proteome.

Croes E, Gebruers K, Robben J, Noben JP, Samyn B, Debyser G, Van Beeumen J, Delcour JA, Courtin CM.

Proteomics. 2008 Apr;8(8):1692-705. doi: 10.1002/pmic.200700813.

PMID:
18340629
15.

Functional proteome analysis of the banana plant (Musa spp.) using de novo sequence analysis of derivatized peptides.

Samyn B, Sergeant K, Carpentier S, Debyser G, Panis B, Swennen R, Van Beeumen J.

J Proteome Res. 2007 Jan;6(1):70-80.

PMID:
17203950
16.

MALDI-TOF/TOF de novo sequence analysis of 2-D PAGE-separated proteins from Halorhodospira halophila, a bacterium with unsequenced genome.

Samyn B, Sergeant K, Memmi S, Debyser G, Devreese B, Van Beeumen J.

Electrophoresis. 2006 Jul;27(13):2702-11.

PMID:
16739227
17.

De novo sequence analysis of N-terminal sulfonated peptides after in-gel guanidination.

Sergeant K, Samyn B, Debyser G, Van Beeumen J.

Proteomics. 2005 Jun;5(9):2369-80.

PMID:
15937995
18.

A case study of de novo sequence analysis of N-sulfonated peptides by MALDI TOF/TOF mass spectrometry.

Samyn B, Debyser G, Sergeant K, Devreese B, Van Beeumen J.

J Am Soc Mass Spectrom. 2004 Dec;15(12):1838-52.

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