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Items: 6

1.

HaTSPiL: A modular pipeline for high-throughput sequencing data analysis.

Morandi E, Cereda M, Incarnato D, Parlato C, Basile G, Anselmi F, Lauria A, Simon LM, Laurence Polignano I, Arruga F, Deaglio S, Tirtei E, Fagioli F, Oliviero S.

PLoS One. 2019 Oct 15;14(10):e0222512. doi: 10.1371/journal.pone.0222512. eCollection 2019.

2.

Luminal lncRNAs Regulation by ERα-Controlled Enhancers in a Ligand-Independent Manner in Breast Cancer Cells.

Miano V, Ferrero G, Rosti V, Manitta E, Elhasnaoui J, Basile G, De Bortoli M.

Int J Mol Sci. 2018 Feb 16;19(2). pii: E593. doi: 10.3390/ijms19020593.

3.

In vivo probing of nascent RNA structures reveals principles of cotranscriptional folding.

Incarnato D, Morandi E, Anselmi F, Simon LM, Basile G, Oliviero S.

Nucleic Acids Res. 2017 Sep 19;45(16):9716-9725. doi: 10.1093/nar/gkx617.

4.

Intragenic DNA methylation prevents spurious transcription initiation.

Neri F, Rapelli S, Krepelova A, Incarnato D, Parlato C, Basile G, Maldotti M, Anselmi F, Oliviero S.

Nature. 2017 Mar 2;543(7643):72-77. doi: 10.1038/nature21373. Epub 2017 Feb 22.

5.

High-throughput single-base resolution mapping of RNA 2΄-O-methylated residues.

Incarnato D, Anselmi F, Morandi E, Neri F, Maldotti M, Rapelli S, Parlato C, Basile G, Oliviero S.

Nucleic Acids Res. 2017 Feb 17;45(3):1433-1441. doi: 10.1093/nar/gkw810.

6.

The long intergenic non-coding RNA CCR492 functions as a let-7 competitive endogenous RNA to regulate c-Myc expression.

Maldotti M, Incarnato D, Neri F, Krepelova A, Rapelli S, Anselmi F, Parlato C, Basile G, Dettori D, Calogero R, Oliviero S.

Biochim Biophys Acta. 2016 Oct;1859(10):1322-32. doi: 10.1016/j.bbagrm.2016.06.010. Epub 2016 Jun 23.

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