Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 20 of 64

1.

WeReview: CRISPR Tools-Live Repository of Computational Tools for Assisting CRISPR/Cas Experiments.

Torres-Perez R, Garcia-Martin JA, Montoliu L, Oliveros JC, Pazos F.

Bioengineering (Basel). 2019 Jul 25;6(3). pii: E63. doi: 10.3390/bioengineering6030063.

2.

Bacterial Feature Finder (BaFF)-a system for extracting features overrepresented in sets of prokaryotic organisms.

López-Ibáñez J, Martín LT, Chagoyen M, Pazos F.

Bioinformatics. 2019 Feb 14. pii: btz099. doi: 10.1093/bioinformatics/btz099. [Epub ahead of print]

PMID:
30844057
3.

Automatic detection of genomic regions with informative epigenetic patterns.

Pazos F, Garcia-Moreno A, Oliveros JC.

BMC Genomics. 2018 Nov 28;19(1):847. doi: 10.1186/s12864-018-5286-5.

4.

Effect of the sequence data deluge on the performance of methods for detecting protein functional residues.

Garrido-Martín D, Pazos F.

BMC Bioinformatics. 2018 Feb 27;19(1):67. doi: 10.1186/s12859-018-2084-7.

5.

Characteristics and evolution of the ecosystem of software tools supporting research in molecular biology.

Pazos F, Chagoyen M.

Brief Bioinform. 2018 Jan 16. doi: 10.1093/bib/bby001. [Epub ahead of print]

PMID:
29351590
6.

Factors affecting interactome-based prediction of human genes associated with clinical signs.

González-Pérez S, Pazos F, Chagoyen M.

BMC Bioinformatics. 2017 Jul 17;18(1):340. doi: 10.1186/s12859-017-1754-1.

7.

A Molecular Basis for the Presentation of Phosphorylated Peptides by HLA-B Antigens.

Alpízar A, Marino F, Ramos-Fernández A, Lombardía M, Jeko A, Pazos F, Paradela A, Santiago C, Heck AJ, Marcilla M.

Mol Cell Proteomics. 2017 Feb;16(2):181-193. doi: 10.1074/mcp.M116.063800. Epub 2016 Dec 5.

8.

Breaking-Cas-interactive design of guide RNAs for CRISPR-Cas experiments for ENSEMBL genomes.

Oliveros JC, Franch M, Tabas-Madrid D, San-León D, Montoliu L, Cubas P, Pazos F.

Nucleic Acids Res. 2016 Jul 8;44(W1):W267-71. doi: 10.1093/nar/gkw407. Epub 2016 May 10.

9.

Functional Analysis of Metabolomics Data.

Chagoyen M, López-Ibáñez J, Pazos F.

Methods Mol Biol. 2016;1415:399-406. doi: 10.1007/978-1-4939-3572-7_20.

PMID:
27115644
10.

MBROLE 2.0-functional enrichment of chemical compounds.

López-Ibáñez J, Pazos F, Chagoyen M.

Nucleic Acids Res. 2016 Jul 8;44(W1):W201-4. doi: 10.1093/nar/gkw253. Epub 2016 Apr 15.

11.

Rare disease relations through common genes and protein interactions.

Fernandez-Novo S, Pazos F, Chagoyen M.

Mol Cell Probes. 2016 Jun;30(3):178-81. doi: 10.1016/j.mcp.2016.03.004. Epub 2016 Mar 16.

PMID:
26995712
12.

Characterization of clinical signs in the human interactome.

Chagoyen M, Pazos F.

Bioinformatics. 2016 Jun 15;32(12):1761-5. doi: 10.1093/bioinformatics/btw054. Epub 2016 Feb 9.

PMID:
26861820
13.

Protein functional features are reflected in the patterns of mRNA translation speed.

López D, Pazos F.

BMC Genomics. 2015 Jul 9;16:513. doi: 10.1186/s12864-015-1734-7.

14.

Practical analysis of specificity-determining residues in protein families.

Chagoyen M, García-Martín JA, Pazos F.

Brief Bioinform. 2016 Mar;17(2):255-61. doi: 10.1093/bib/bbv045. Epub 2015 Jul 2. Review.

PMID:
26141829
15.

Detection of significant protein coevolution.

Ochoa D, Juan D, Valencia A, Pazos F.

Bioinformatics. 2015 Jul 1;31(13):2166-73. doi: 10.1093/bioinformatics/btv102. Epub 2015 Feb 24.

PMID:
25717190
16.

Practical aspects of protein co-evolution.

Ochoa D, Pazos F.

Front Cell Dev Biol. 2014 Apr 22;2:14. doi: 10.3389/fcell.2014.00014. eCollection 2014. Review.

17.

Rational design of a ligand-based antagonist of jasmonate perception.

Monte I, Hamberg M, Chini A, Gimenez-Ibanez S, García-Casado G, Porzel A, Pazos F, Boter M, Solano R.

Nat Chem Biol. 2014 Aug;10(8):671-6. doi: 10.1038/nchembio.1575. Epub 2014 Jul 6.

PMID:
24997606
18.

Molecular determinants of the ATP hydrolysis asymmetry of the CCT chaperonin complex.

Chagoyen M, Carrascosa JL, Pazos F, Valpuesta JM.

Proteins. 2014 May;82(5):703-7. doi: 10.1002/prot.24510. Epub 2014 Feb 12.

PMID:
24420718
19.

Structural basis for the broad specificity of a new family of amino-acid racemases.

Espaillat A, Carrasco-López C, Bernardo-García N, Pietrosemoli N, Otero LH, Álvarez L, de Pedro MA, Pazos F, Davis BM, Waldor MK, Hermoso JA, Cava F.

Acta Crystallogr D Biol Crystallogr. 2014 Jan;70(Pt 1):79-90. doi: 10.1107/S1399004713024838. Epub 2013 Dec 24.

20.

Protein intrinsic disorder in plants.

Pazos F, Pietrosemoli N, García-Martín JA, Solano R.

Front Plant Sci. 2013 Sep 12;4:363. doi: 10.3389/fpls.2013.00363. Review.

Supplemental Content

Loading ...
Support Center