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Items: 1 to 20 of 26

1.

Earth history and the passerine superradiation.

Oliveros CH, Field DJ, Ksepka DT, Barker FK, Aleixo A, Andersen MJ, Alström P, Benz BW, Braun EL, Braun MJ, Bravo GA, Brumfield RT, Chesser RT, Claramunt S, Cracraft J, Cuervo AM, Derryberry EP, Glenn TC, Harvey MG, Hosner PA, Joseph L, Kimball RT, Mack AL, Miskelly CM, Peterson AT, Robbins MB, Sheldon FH, Silveira LF, Smith BT, White ND, Moyle RG, Faircloth BC.

Proc Natl Acad Sci U S A. 2019 Apr 16;116(16):7916-7925. doi: 10.1073/pnas.1813206116. Epub 2019 Apr 1.

2.

Metrics matter: the effect of parasite richness, intensity and prevalence on the evolution of host migration.

Shaw AK, Sherman J, Barker FK, Zuk M.

Proc Biol Sci. 2018 Nov 14;285(1891). pii: 20182147. doi: 10.1098/rspb.2018.2147.

PMID:
30429312
3.
4.

A revised classification of the Icteridae (Aves) based on DNA sequence data.

Remsen JV, Powell AF, Schodde R, Barker FK, Lanyon SM.

Zootaxa. 2016 Mar 21;4093(2):285-92. doi: 10.11646/zootaxa.4093.2.9.

PMID:
27394496
5.

Whole-genome analyses resolve early branches in the tree of life of modern birds.

Jarvis ED, Mirarab S, Aberer AJ, Li B, Houde P, Li C, Ho SY, Faircloth BC, Nabholz B, Howard JT, Suh A, Weber CC, da Fonseca RR, Li J, Zhang F, Li H, Zhou L, Narula N, Liu L, Ganapathy G, Boussau B, Bayzid MS, Zavidovych V, Subramanian S, Gabaldón T, Capella-Gutiérrez S, Huerta-Cepas J, Rekepalli B, Munch K, Schierup M, Lindow B, Warren WC, Ray D, Green RE, Bruford MW, Zhan X, Dixon A, Li S, Li N, Huang Y, Derryberry EP, Bertelsen MF, Sheldon FH, Brumfield RT, Mello CV, Lovell PV, Wirthlin M, Schneider MP, Prosdocimi F, Samaniego JA, Vargas Velazquez AM, Alfaro-Núñez A, Campos PF, Petersen B, Sicheritz-Ponten T, Pas A, Bailey T, Scofield P, Bunce M, Lambert DM, Zhou Q, Perelman P, Driskell AC, Shapiro B, Xiong Z, Zeng Y, Liu S, Li Z, Liu B, Wu K, Xiao J, Yinqi X, Zheng Q, Zhang Y, Yang H, Wang J, Smeds L, Rheindt FE, Braun M, Fjeldsa J, Orlando L, Barker FK, Jønsson KA, Johnson W, Koepfli KP, O'Brien S, Haussler D, Ryder OA, Rahbek C, Willerslev E, Graves GR, Glenn TC, McCormack J, Burt D, Ellegren H, Alström P, Edwards SV, Stamatakis A, Mindell DP, Cracraft J, Braun EL, Warnow T, Jun W, Gilbert MT, Zhang G.

Science. 2014 Dec 12;346(6215):1320-31. doi: 10.1126/science.1253451.

6.

Temperate origins of long-distance seasonal migration in New World songbirds.

Winger BM, Barker FK, Ree RH.

Proc Natl Acad Sci U S A. 2014 Aug 19;111(33):12115-20. doi: 10.1073/pnas.1405000111. Epub 2014 Aug 4.

7.

Phylogenetics and diversification of tanagers (Passeriformes: Thraupidae), the largest radiation of Neotropical songbirds.

Burns KJ, Shultz AJ, Title PO, Mason NA, Barker FK, Klicka J, Lanyon SM, Lovette IJ.

Mol Phylogenet Evol. 2014 Jun;75:41-77. doi: 10.1016/j.ympev.2014.02.006. Epub 2014 Feb 26.

PMID:
24583021
8.

A comprehensive species-level molecular phylogeny of the New World blackbirds (Icteridae).

Powell AF, Barker FK, Lanyon SM, Burns KJ, Klicka J, Lovette IJ.

Mol Phylogenet Evol. 2014 Feb;71:94-112. doi: 10.1016/j.ympev.2013.11.009. Epub 2013 Nov 27.

PMID:
24291659
9.

The early diversification history of didelphid marsupials: a window into South America's "Splendid Isolation".

Jansa SA, Barker FK, Voss RS.

Evolution. 2014 Mar;68(3):684-95. doi: 10.1111/evo.12290. Epub 2013 Nov 6.

PMID:
24125654
10.

Multilocus phylogeny of the avian family Alaudidae (larks) reveals complex morphological evolution, non-monophyletic genera and hidden species diversity.

Alström P, Barnes KN, Olsson U, Barker FK, Bloomer P, Khan AA, Qureshi MA, Guillaumet A, Crochet PA, Ryan PG.

Mol Phylogenet Evol. 2013 Dec;69(3):1043-56. doi: 10.1016/j.ympev.2013.06.005. Epub 2013 Jun 21.

PMID:
23792153
11.

Going to extremes: contrasting rates of diversification in a recent radiation of new world passerine birds.

Barker FK, Burns KJ, Klicka J, Lanyon SM, Lovette IJ.

Syst Biol. 2013 Mar;62(2):298-320. doi: 10.1093/sysbio/sys094. Epub 2012 Dec 9.

PMID:
23229025
12.

Contrasting evolutionary dynamics and information content of the avian mitochondrial control region and ND2 gene.

Barker FK, Benesh MK, Vandergon AJ, Lanyon SM.

PLoS One. 2012;7(10):e46403. doi: 10.1371/journal.pone.0046403. Epub 2012 Oct 5.

13.

Empirical evaluation of partitioning schemes for phylogenetic analyses of mitogenomic data: an avian case study.

Powell AF, Barker FK, Lanyon SM.

Mol Phylogenet Evol. 2013 Jan;66(1):69-79. doi: 10.1016/j.ympev.2012.09.006. Epub 2012 Sep 18.

PMID:
23000817
14.

Permanent Genetic Resources added to Molecular Ecology Resources Database 1 June 2011-31 July 2011.

Molecular Ecology Resources Primer Development Consortium, Barker FK, Bell JJ, Bogdanowicz SM, Bonatto SL, Cezilly F, Collins SM, Dubreuil C, Dufort MJ, Eraud C, Fuseya R, Heap EA, Jacobsen N, Madders M, McEwing R, Michel AP, Mougeot F, Ogden RS, Orantes LC, Othman AS, Parent E, Pulido-Santacruz P, Rioux-Paré R, Roberts MF, Rosazlina R, Sakamoto T, De-León PS, Sévigny JM, St-Onge P, Terraube J, Tingay RE, Tremblay R, Watanabe S, Wattier RA.

Mol Ecol Resour. 2011 Nov;11(6):1124-6. doi: 10.1111/j.1755-0998.2011.03068.x. Epub 2011 Sep 27.

PMID:
21951598
15.

A comprehensive multilocus phylogeny for the wood-warblers and a revised classification of the Parulidae (Aves).

Lovette IJ, Pérez-Emán JL, Sullivan JP, Banks RC, Fiorentino I, Córdoba-Córdoba S, Echeverry-Galvis M, Barker FK, Burns KJ, Klicka J, Lanyon SM, Bermingham E.

Mol Phylogenet Evol. 2010 Nov;57(2):753-70. doi: 10.1016/j.ympev.2010.07.018. Epub 2010 Aug 7.

PMID:
20696258
16.

A molecular phylogenetic hypothesis for the manakins (Aves: Pipridae).

McKay BD, Barker FK, Mays HL Jr, Doucet SM, Hill GE.

Mol Phylogenet Evol. 2010 May;55(2):733-7. doi: 10.1016/j.ympev.2010.02.024. Epub 2010 Feb 25.

PMID:
20188842
17.

Phylogenetic methods in natural product research.

Schmitt I, Barker FK.

Nat Prod Rep. 2009 Dec;26(12):1585-602. doi: 10.1039/b910458p. Epub 2009 Oct 13. Review.

PMID:
19936388
18.

Genome 10K: a proposal to obtain whole-genome sequence for 10,000 vertebrate species.

Genome 10K Community of Scientists.

J Hered. 2009 Nov-Dec;100(6):659-74. doi: 10.1093/jhered/esp086. Epub 2009 Nov 5.

19.

A well-tested set of primers to amplify regions spread across the avian genome.

Kimball RT, Braun EL, Barker FK, Bowie RC, Braun MJ, Chojnowski JL, Hackett SJ, Han KL, Harshman J, Heimer-Torres V, Holznagel W, Huddleston CJ, Marks BD, Miglia KJ, Moore WS, Reddy S, Sheldon FH, Smith JV, Witt CC, Yuri T.

Mol Phylogenet Evol. 2009 Mar;50(3):654-60. doi: 10.1016/j.ympev.2008.11.018. Epub 2008 Dec 6. No abstract available.

PMID:
19084073
20.

Fourfold polyphyly of the genus formerly known as Upucerthia, with notes on the systematics and evolution of the avian subfamily Furnariinae.

Chesser RT, Barker FK, Brumfield RT.

Mol Phylogenet Evol. 2007 Sep;44(3):1320-32. Epub 2007 May 3.

PMID:
17632018

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