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Items: 1 to 20 of 23

1.

iTRAQ-Based Global Phosphoproteomics Reveals Novel Molecular Differences Between Toxoplasma gondii Strains of Different Genotypes.

Wang ZX, Zhou CX, Calderón-Mantilla G, Petsalaki E, He JJ, Song HY, Elsheikha HM, Zhu XQ.

Front Cell Infect Microbiol. 2019 Aug 23;9:307. doi: 10.3389/fcimb.2019.00307. eCollection 2019.

2.

Large-scale datasets uncovering cell signalling networks in cancer: context matters.

Sharma S, Petsalaki E.

Curr Opin Genet Dev. 2019 Feb;54:118-124. doi: 10.1016/j.gde.2019.05.001. Epub 2019 Jun 11. Review.

3.

Allosteric Modulation of Binding Specificity by Alternative Packing of Protein Cores.

Ben-David M, Huang H, Sun MGF, Corbi-Verge C, Petsalaki E, Liu K, Gfeller D, Garg P, Tempel W, Sochirca I, Shifman JM, Davidson A, Min J, Kim PM, Sidhu SS.

J Mol Biol. 2019 Jan 18;431(2):336-350. doi: 10.1016/j.jmb.2018.11.018. Epub 2018 Nov 22.

PMID:
30471255
4.

The pervasive effects of recombinant Fasciola gigantica Ras-related protein Rab10 on the functions of goat peripheral blood mononuclear cells.

Tian AL, Lu M, Zhang FK, Calderón-Mantilla G, Petsalaki E, Tian X, Wang W, Huang SY, Li X, Elsheikha HM, Zhu XQ.

Parasit Vectors. 2018 Nov 6;11(1):579. doi: 10.1186/s13071-018-3148-2.

5.

Application of CRISPR-Cas9 Based Genome-Wide Screening Approaches to Study Cellular Signalling Mechanisms.

Sharma S, Petsalaki E.

Int J Mol Sci. 2018 Mar 21;19(4). pii: E933. doi: 10.3390/ijms19040933. Review.

6.

A recombinant Fasciola gigantica 14-3-3 epsilon protein (rFg14-3-3e) modulates various functions of goat peripheral blood mononuclear cells.

Tian AL, Lu M, Calderón-Mantilla G, Petsalaki E, Dottorini T, Tian X, Wang Y, Huang SY, Hou JL, Li X, Elsheikha HM, Zhu XQ.

Parasit Vectors. 2018 Mar 6;11(1):152. doi: 10.1186/s13071-018-2745-4.

7.

Proteomics and phosphoproteomics in precision medicine: applications and challenges.

Giudice G, Petsalaki E.

Brief Bioinform. 2019 May 21;20(3):767-777. doi: 10.1093/bib/bbx141.

8.

Systematic identification of phosphorylation-mediated protein interaction switches.

Betts MJ, Wichmann O, Utz M, Andre T, Petsalaki E, Minguez P, Parca L, Roth FP, Gavin AC, Bork P, Russell RB.

PLoS Comput Biol. 2017 Mar 27;13(3):e1005462. doi: 10.1371/journal.pcbi.1005462. eCollection 2017 Mar.

9.

Pooled-matrix protein interaction screens using Barcode Fusion Genetics.

Yachie N, Petsalaki E, Mellor JC, Weile J, Jacob Y, Verby M, Ozturk SB, Li S, Cote AG, Mosca R, Knapp JJ, Ko M, Yu A, Gebbia M, Sahni N, Yi S, Tyagi T, Sheykhkarimli D, Roth JF, Wong C, Musa L, Snider J, Liu YC, Yu H, Braun P, Stagljar I, Hao T, Calderwood MA, Pelletier L, Aloy P, Hill DE, Vidal M, Roth FP.

Mol Syst Biol. 2016 Apr 22;12(4):863. doi: 10.15252/msb.20156660.

10.

SELPHI: correlation-based identification of kinase-associated networks from global phospho-proteomics data sets.

Petsalaki E, Helbig AO, Gopal A, Pasculescu A, Roth FP, Pawson T.

Nucleic Acids Res. 2015 Jul 1;43(W1):W276-82. doi: 10.1093/nar/gkv459. Epub 2015 May 6.

11.

Combinatorial proteomic analysis of intercellular signaling applied to the CD28 T-cell costimulatory receptor.

Tian R, Wang H, Gish GD, Petsalaki E, Pasculescu A, Shi Y, Mollenauer M, Bagshaw RD, Yosef N, Hunter T, Gingras AC, Weiss A, Pawson T.

Proc Natl Acad Sci U S A. 2015 Mar 31;112(13):E1594-603. doi: 10.1073/pnas.1503286112. Epub 2015 Mar 17.

12.

Protein domain-level landscape of cancer-type-specific somatic mutations.

Yang F, Petsalaki E, Rolland T, Hill DE, Vidal M, Roth FP.

PLoS Comput Biol. 2015 Mar 20;11(3):e1004147. doi: 10.1371/journal.pcbi.1004147. eCollection 2015 Mar.

13.

Phase transition of a disordered nuage protein generates environmentally responsive membraneless organelles.

Nott TJ, Petsalaki E, Farber P, Jervis D, Fussner E, Plochowietz A, Craggs TD, Bazett-Jones DP, Pawson T, Forman-Kay JD, Baldwin AJ.

Mol Cell. 2015 Mar 5;57(5):936-947. doi: 10.1016/j.molcel.2015.01.013.

14.

Src homology 2 domain containing protein 5 (SH2D5) binds the breakpoint cluster region protein, BCR, and regulates levels of Rac1-GTP.

Gray EJ, Petsalaki E, James DA, Bagshaw RD, Stacey MM, Rocks O, Gingras AC, Pawson T.

J Biol Chem. 2014 Dec 19;289(51):35397-408. doi: 10.1074/jbc.M114.615112. Epub 2014 Oct 20.

15.

Interaction domains of Sos1/Grb2 are finely tuned for cooperative control of embryonic stem cell fate.

Findlay GM, Smith MJ, Lanner F, Hsiung MS, Gish GD, Petsalaki E, Cockburn K, Kaneko T, Huang H, Bagshaw RD, Ketela T, Tucholska M, Taylor L, Bowtell DD, Moffat J, Ikura M, Li SS, Sidhu SS, Rossant J, Pawson T.

Cell. 2013 Feb 28;152(5):1008-20. doi: 10.1016/j.cell.2013.01.056.

16.

PepSite: prediction of peptide-binding sites from protein surfaces.

Trabuco LG, Lise S, Petsalaki E, Russell RB.

Nucleic Acids Res. 2012 Jul;40(Web Server issue):W423-7. doi: 10.1093/nar/gks398. Epub 2012 May 16.

17.

Structural basis and sequence rules for substrate recognition by Tankyrase explain the basis for cherubism disease.

Guettler S, LaRose J, Petsalaki E, Gish G, Scotter A, Pawson T, Rottapel R, Sicheri F.

Cell. 2011 Dec 9;147(6):1340-54. doi: 10.1016/j.cell.2011.10.046. Erratum in: Cell. 2012 Jan 20;148(1-2):376.

18.

WD40 proteins propel cellular networks.

Stirnimann CU, Petsalaki E, Russell RB, Müller CW.

Trends Biochem Sci. 2010 Oct;35(10):565-74. doi: 10.1016/j.tibs.2010.04.003. Epub 2010 May 5. Review.

PMID:
20451393
19.

Accurate prediction of peptide binding sites on protein surfaces.

Petsalaki E, Stark A, García-Urdiales E, Russell RB.

PLoS Comput Biol. 2009 Mar;5(3):e1000335. doi: 10.1371/journal.pcbi.1000335. Epub 2009 Mar 27.

20.

Interactions between the Fyn SH3-domain and adaptor protein Cbp/PAG derived ligands, effects on kinase activity and affinity.

Solheim SA, Petsalaki E, Stokka AJ, Russell RB, Taskén K, Berge T.

FEBS J. 2008 Oct;275(19):4863-74. doi: 10.1111/j.1742-4658.2008.06626.x. Epub 2008 Aug 21.

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