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Items: 1 to 20 of 255

1.

Metagenomic Approaches to Assess Bacteriophages in Various Environmental Niches.

Hayes S, Mahony J, Nauta A, van Sinderen D.

Viruses. 2017 May 24;9(6). pii: E127. doi: 10.3390/v9060127. Review.

2.

Sourdough authentication: quantitative PCR to detect the lactic acid bacterial microbiota in breads.

Pontonio E, Di Cagno R, Mahony J, Lanera A, De Angelis M, van Sinderen D, Gobbetti M.

Sci Rep. 2017 Apr 3;7(1):624. doi: 10.1038/s41598-017-00549-2.

3.

Comparative and functional genomics of the Lactococcus lactis taxon; insights into evolution and niche adaptation.

Kelleher P, Bottacini F, Mahony J, Kilcawley KN, van Sinderen D.

BMC Genomics. 2017 Mar 29;18(1):267. doi: 10.1186/s12864-017-3650-5.

4.

Phage Biodiversity in Artisanal Cheese Wheys Reflects the Complexity of the Fermentation Process.

Mahony J, Moscarelli A, Kelleher P, Lugli GA, Ventura M, Settanni L, van Sinderen D.

Viruses. 2017 Mar 16;9(3). pii: E45. doi: 10.3390/v9030045.

5.

Erratum to: Ancient bacteria of the Ötzi's microbiome: a genomic tale from the Copper Age.

Lugli GA, Milani C, Mancabelli L, Turroni F, Ferrario C, Duranti S, van Sinderen D, Ventura M.

Microbiome. 2017 Feb 17;5(1):23. doi: 10.1186/s40168-017-0243-0. No abstract available.

6.

Biocidal Inactivation of Lactococcus lactis Bacteriophages: Efficacy and Targets of Commonly Used Sanitizers.

Hayes S, Murphy J, Mahony J, Lugli GA, Ventura M, Noben JP, Franz CM, Neve H, Nauta A, Van Sinderen D.

Front Microbiol. 2017 Feb 2;8:107. doi: 10.3389/fmicb.2017.00107. eCollection 2017.

7.

Meta-analysis of the human gut microbiome from urbanized and pre-agricultural populations.

Mancabelli L, Milani C, Lugli GA, Turroni F, Ferrario C, van Sinderen D, Ventura M.

Environ Microbiol. 2017 Apr;19(4):1379-1390. doi: 10.1111/1462-2920.13692. Epub 2017 Feb 28. Review.

PMID:
28198087
8.

Genetic and functional characterisation of the lactococcal P335 phage-host interactions.

Mahony J, Oliveira J, Collins B, Hanemaaijer L, Lugli GA, Neve H, Ventura M, Kouwen TR, Cambillau C, van Sinderen D.

BMC Genomics. 2017 Feb 10;18(1):146. doi: 10.1186/s12864-017-3537-5.

9.

Ancient bacteria of the Ötzi's microbiome: a genomic tale from the Copper Age.

Lugli GA, Milani C, Mancabelli L, Turroni F, Ferrario C, Duranti S, van Sinderen D, Ventura M.

Microbiome. 2017 Jan 17;5(1):5. doi: 10.1186/s40168-016-0221-y. Erratum in: Microbiome. 2017 Feb 17;5(1):23.

10.
11.

Prevalence of Antibiotic Resistance Genes among Human Gut-Derived Bifidobacteria.

Duranti S, Lugli GA, Mancabelli L, Turroni F, Milani C, Mangifesta M, Ferrario C, Anzalone R, Viappiani A, van Sinderen D, Ventura M.

Appl Environ Microbiol. 2017 Jan 17;83(3). pii: e02894-16. doi: 10.1128/AEM.02894-16. Print 2017 Feb 1.

PMID:
27864179
12.

Genome Sequences of Eight Prophages Isolated from Lactococcus lactis Dairy Strains.

Oliveira J, Mahony J, Lugli GA, Hanemaaijer L, Kouwen T, Ventura M, van Sinderen D.

Genome Announc. 2016 Nov 10;4(6). pii: e00906-16. doi: 10.1128/genomeA.00906-16.

13.

Functional and structural dissection of the tape measure protein of lactococcal phage TP901-1.

Mahony J, Alqarni M, Stockdale S, Spinelli S, Feyereisen M, Cambillau C, Sinderen DV.

Sci Rep. 2016 Nov 8;6:36667. doi: 10.1038/srep36667.

14.

The Surface-Associated Exopolysaccharide of Bifidobacterium longum 35624 Plays an Essential Role in Dampening Host Proinflammatory Responses and Repressing Local TH17 Responses.

Schiavi E, Gleinser M, Molloy E, Groeger D, Frei R, Ferstl R, Rodriguez-Perez N, Ziegler M, Grant R, Moriarty TF, Plattner S, Healy S, O'Connell Motherway M, Akdis CA, Roper J, Altmann F, van Sinderen D, O'Mahony L.

Appl Environ Microbiol. 2016 Nov 21;82(24):7185-7196. Print 2016 Dec 15.

15.

Glycosulfatase-Encoding Gene Cluster in Bifidobacterium breve UCC2003.

Egan M, Jiang H, O'Connell Motherway M, Oscarson S, van Sinderen D.

Appl Environ Microbiol. 2016 Oct 27;82(22):6611-6623. Print 2016 Nov 15.

16.

Stable Engraftment of Bifidobacterium longum AH1206 in the Human Gut Depends on Individualized Features of the Resident Microbiome.

Maldonado-Gómez MX, Martínez I, Bottacini F, O'Callaghan A, Ventura M, van Sinderen D, Hillmann B, Vangay P, Knights D, Hutkins RW, Walter J.

Cell Host Microbe. 2016 Oct 12;20(4):515-526. doi: 10.1016/j.chom.2016.09.001. Epub 2016 Sep 29.

PMID:
27693307
17.

Genome Analysis and Characterisation of the Exopolysaccharide Produced by Bifidobacterium longum subsp. longum 35624™.

Altmann F, Kosma P, O'Callaghan A, Leahy S, Bottacini F, Molloy E, Plattner S, Schiavi E, Gleinser M, Groeger D, Grant R, Rodriguez Perez N, Healy S, Svehla E, Windwarder M, Hofinger A, O'Connell Motherway M, Akdis CA, Xu J, Roper J, van Sinderen D, O'Mahony L.

PLoS One. 2016 Sep 22;11(9):e0162983. doi: 10.1371/journal.pone.0162983. eCollection 2016.

18.

Elucidating the gut microbiome of ulcerative colitis: bifidobacteria as novel microbial biomarkers.

Duranti S, Gaiani F, Mancabelli L, Milani C, Grandi A, Bolchi A, Santoni A, Lugli GA, Ferrario C, Mangifesta M, Viappiani A, Bertoni S, Vivo V, Serafini F, Barbaro MR, Fugazza A, Barbara G, Gioiosa L, Palanza P, Cantoni AM, de'Angelis GL, Barocelli E, de'Angelis N, van Sinderen D, Ventura M, Turroni F.

FEMS Microbiol Ecol. 2016 Dec;92(12). pii: fiw191. doi: 10.1093/femsec/fiw191. Epub 2016 Sep 7.

PMID:
27604252
19.

Stress Physiology of Lactic Acid Bacteria.

Papadimitriou K, Alegría Á, Bron PA, de Angelis M, Gobbetti M, Kleerebezem M, Lemos JA, Linares DM, Ross P, Stanton C, Turroni F, van Sinderen D, Varmanen P, Ventura M, Zúñiga M, Tsakalidou E, Kok J.

Microbiol Mol Biol Rev. 2016 Jul 27;80(3):837-90. doi: 10.1128/MMBR.00076-15. Print 2016 Sep. Review.

PMID:
27466284
20.

Bifidobacteria and Their Role as Members of the Human Gut Microbiota.

O'Callaghan A, van Sinderen D.

Front Microbiol. 2016 Jun 15;7:925. doi: 10.3389/fmicb.2016.00925. eCollection 2016. Review.

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