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Items: 1 to 20 of 29


Wood Transcriptome Profiling Identifies Critical Pathway Genes of Secondary Wall Biosynthesis and Novel Regulators for Vascular Cambium Development in Populus.

Kim MH, Cho JS, Jeon HW, Sangsawang K, Shim D, Choi YI, Park EJ, Lee H, Ko JH.

Genes (Basel). 2019 Sep 7;10(9). pii: E690. doi: 10.3390/genes10090690.


Transcriptional network regulation of the brassinosteroid signaling pathway by the BES1-TPL-HDA19 co-repressor complex.

Kim H, Shim D, Moon S, Lee J, Bae W, Choi H, Kim K, Ryu H.

Planta. 2019 Oct;250(4):1371-1377. doi: 10.1007/s00425-019-03233-z. Epub 2019 Jul 6.


Transcriptomic changes in sweetpotato peroxidases in response to infection with the root-knot nematode Meloidogyne incognita.

Sung YW, Lee IH, Shim D, Lee KL, Nam KJ, Yang JW, Lee JJ, Kwak SS, Kim YH.

Mol Biol Rep. 2019 Aug;46(4):4555-4564. doi: 10.1007/s11033-019-04911-7. Epub 2019 Jun 19.


Transcriptome Analysis of Diurnal Gene Expression in Chinese Cabbage.

Kim JA, Shim D, Kumari S, Jung HE, Jung KH, Jeong H, Kim WY, Lee SI, Jeong MJ.

Genes (Basel). 2019 Feb 11;10(2). pii: E130. doi: 10.3390/genes10020130.


Brassinosteroids facilitate xylem differentiation and wood formation in tomato.

Lee J, Han S, Lee HY, Jeong B, Heo TY, Hyun TK, Kim K, Je BI, Lee H, Shim D, Park SJ, Ryu H.

Planta. 2019 May;249(5):1391-1403. doi: 10.1007/s00425-019-03094-6. Epub 2019 Jan 23.


Transcriptome analysis of root-knot nematode (Meloidogyne incognita)-resistant and susceptible sweetpotato cultivars.

Lee IH, Shim D, Jeong JC, Sung YW, Nam KJ, Yang JW, Ha J, Lee JJ, Kim YH.

Planta. 2019 Feb;249(2):431-444. doi: 10.1007/s00425-018-3001-z. Epub 2018 Sep 19.


Genome-wide transcriptomic analysis of BR-deficient Micro-Tom reveals correlations between drought stress tolerance and brassinosteroid signaling in tomato.

Lee J, Shim D, Moon S, Kim H, Bae W, Kim K, Kim YH, Rhee SK, Hong CP, Hong SY, Lee YJ, Sung J, Ryu H.

Plant Physiol Biochem. 2018 Jun;127:553-560. doi: 10.1016/j.plaphy.2018.04.031. Epub 2018 Apr 27.


RNA-Seq of Plant-Parasitic Nematode Meloidogyne incognita at Various Stages of Its Development.

Choi I, Subramanian P, Shim D, Oh BJ, Hahn BS.

Front Genet. 2017 Nov 27;8:190. doi: 10.3389/fgene.2017.00190. eCollection 2017. No abstract available.


Development and Molecular Characterization of Novel Polymorphic Genomic DNA SSR Markers in Lentinula edodes.

Moon S, Lee HY, Shim D, Kim M, Ka KH, Ryoo R, Ko HG, Koo CD, Chung JW, Ryu H.

Mycobiology. 2017 Jun;45(2):105-109. doi: 10.5941/MYCO.2017.45.2.105. Epub 2017 Jun 30.


Development of 44 Novel Polymorphic SSR Markers for Determination of Shiitake Mushroom (Lentinula edodes) Cultivars.

Lee HY, Moon S, Shim D, Hong CP, Lee Y, Koo CD, Chung JW, Ryu H.

Genes (Basel). 2017 Mar 24;8(4). pii: E109. doi: 10.3390/genes8040109.


The green ash transcriptome and identification of genes responding to abiotic and biotic stresses.

Lane T, Best T, Zembower N, Davitt J, Henry N, Xu Y, Koch J, Liang H, McGraw J, Schuster S, Shim D, Coggeshall MV, Carlson JE, Staton ME.

BMC Genomics. 2016 Sep 2;17:702. doi: 10.1186/s12864-016-3052-0.


Transcriptome analysis and identification of genes associated with ω-3 fatty acid biosynthesis in Perilla frutescens (L.) var. frutescens.

Kim HU, Lee KR, Shim D, Lee JH, Chen GQ, Hwang S.

BMC Genomics. 2016 Jun 24;17:474. doi: 10.1186/s12864-016-2805-0.


The complete chloroplast genome of Capsicum frutescens (Solanaceae).

Shim D, Raveendar S, Lee JR, Lee GA, Ro NY, Jeon YA, Cho GT, Lee HS, Ma KH, Chung JW.

Appl Plant Sci. 2016 May 17;4(5). pii: apps.1600002. doi: 10.3732/apps.1600002. eCollection 2016 May.


Molecular and biochemical characterizations of the monoacylglycerol lipase gene family of Arabidopsis thaliana.

Kim RJ, Kim HJ, Shim D, Suh MC.

Plant J. 2016 Mar;85(6):758-71. doi: 10.1111/tpj.13146.


Whole genome de novo sequencing and genome annotation of the world popular cultivated edible mushroom, Lentinula edodes.

Shim D, Park SG, Kim K, Bae W, Lee GW, Ha BS, Ro HS, Kim M, Ryoo R, Rhee SK, Nou IS, Koo CD, Hong CP, Ryu H.

J Biotechnol. 2016 Apr 10;223:24-5. doi: 10.1016/j.jbiotec.2016.02.032. Epub 2016 Feb 26.


Characterization of the Transcriptome of the Xerophyte Ammopiptanthus mongolicus Leaves under Drought Stress by 454 Pyrosequencing.

Pang T, Guo L, Shim D, Cannon N, Tang S, Chen J, Xia X, Yin W, Carlson JE.

PLoS One. 2015 Aug 27;10(8):e0136495. doi: 10.1371/journal.pone.0136495. eCollection 2015. Erratum in: PLoS One. 2015;10(10):e0140412.


The complete chloroplast genome of Capsicum annuum var. glabriusculum using Illumina sequencing.

Raveendar S, Na YW, Lee JR, Shim D, Ma KH, Lee SY, Chung JW.

Molecules. 2015 Jul 20;20(7):13080-8. doi: 10.3390/molecules200713080.


A molecular framework for seasonal growth-dormancy regulation in perennial plants.

Shim D, Ko JH, Kim WC, Wang Q, Keathley DE, Han KH.

Hortic Res. 2014 Nov 26;1:14059. doi: 10.1038/hortres.2014.59. eCollection 2014. Review.


AtABCA9 transporter supplies fatty acids for lipid synthesis to the endoplasmic reticulum.

Kim S, Yamaoka Y, Ono H, Kim H, Shim D, Maeshima M, Martinoia E, Cahoon EB, Nishida I, Lee Y.

Proc Natl Acad Sci U S A. 2013 Jan 8;110(2):773-8. doi: 10.1073/pnas.1214159110. Epub 2012 Dec 26.

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