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Items: 19

1.

Cellular Gene Expression during Hepatitis C Virus Replication as Revealed by Ribosome Profiling.

Gerresheim GK, Bathke J, Michel AM, Andreev DE, Shalamova LA, Rossbach O, Hu P, Glebe D, Fricke M, Marz M, Goesmann A, Kiniry SJ, Baranov PV, Shatsky IN, Niepmann M.

Int J Mol Sci. 2019 Mar 15;20(6). pii: E1321. doi: 10.3390/ijms20061321.

2.

Cap-Independent Translation: What's in a Name?

Shatsky IN, Terenin IM, Smirnova VV, Andreev DE.

Trends Biochem Sci. 2018 Nov;43(11):882-895. doi: 10.1016/j.tibs.2018.04.011. Epub 2018 May 19. Review.

PMID:
29789219
3.

Translation control of mRNAs encoding mammalian translation initiation factors.

Andreev DE, Dmitriev SE, Loughran G, Terenin IM, Baranov PV, Shatsky IN.

Gene. 2018 Apr 20;651:174-182. doi: 10.1016/j.gene.2018.02.013. Epub 2018 Feb 4. Review.

PMID:
29414693
4.

A researcher's guide to the galaxy of IRESs.

Terenin IM, Smirnova VV, Andreev DE, Dmitriev SE, Shatsky IN.

Cell Mol Life Sci. 2017 Apr;74(8):1431-1455. doi: 10.1007/s00018-016-2409-5. Epub 2016 Nov 16. Review.

PMID:
27853833
5.

Systematic analysis of the PTEN 5' leader identifies a major AUU initiated proteoform.

Tzani I, Ivanov IP, Andreev DE, Dmitriev RI, Dean KA, Baranov PV, Atkins JF, Loughran G.

Open Biol. 2016 May;6(5). pii: 150203. doi: 10.1098/rsob.150203. Epub 2016 May 25.

6.

Does HIV-1 mRNA 5'-untranslated region bear an internal ribosome entry site?

Smirnova VV, Terenin IM, Khutornenko AA, Andreev DE, Dmitriev SE, Shatsky IN.

Biochimie. 2016 Feb;121:228-37. doi: 10.1016/j.biochi.2015.12.004. Epub 2015 Dec 14.

PMID:
26700150
7.

Transcriptome-wide studies uncover the diversity of modes of mRNA recruitment to eukaryotic ribosomes.

Shatsky IN, Dmitriev SE, Andreev DE, Terenin IM.

Crit Rev Biochem Mol Biol. 2014 Mar-Apr;49(2):164-77. doi: 10.3109/10409238.2014.887051. Epub 2014 Feb 13. Review.

PMID:
24520918
8.

A novel mechanism of eukaryotic translation initiation that is neither m7G-cap-, nor IRES-dependent.

Terenin IM, Andreev DE, Dmitriev SE, Shatsky IN.

Nucleic Acids Res. 2013 Feb 1;41(3):1807-16. doi: 10.1093/nar/gks1282. Epub 2012 Dec 24.

9.

The 5' untranslated region of Apaf-1 mRNA directs translation under apoptosis conditions via a 5' end-dependent scanning mechanism.

Andreev DE, Dmitriev SE, Zinovkin R, Terenin IM, Shatsky IN.

FEBS Lett. 2012 Nov 30;586(23):4139-43. doi: 10.1016/j.febslet.2012.10.010. Epub 2012 Oct 17.

10.

Dynamic localization of two tobamovirus ORF6 proteins involves distinct organellar compartments.

Gushchin VA, Lukhovitskaya NI, Andreev DE, Wright KM, Taliansky ME, Solovyev AG, Morozov SY, MacFarlane SA.

J Gen Virol. 2013 Jan;94(Pt 1):230-40. doi: 10.1099/vir.0.045278-0. Epub 2012 Oct 10.

PMID:
23052393
11.

In vitro activity of human translation initiation factor eIF4B is not affected by phosphomimetic amino acid substitutions S422D and S422E.

Shagam LI, Terenin IM, Andreev DE, Dunaevsky JE, Dmitriev SE.

Biochimie. 2012 Dec;94(12):2484-90. doi: 10.1016/j.biochi.2012.06.021. Epub 2012 Jun 28.

12.

Glycyl-tRNA synthetase specifically binds to the poliovirus IRES to activate translation initiation.

Andreev DE, Hirnet J, Terenin IM, Dmitriev SE, Niepmann M, Shatsky IN.

Nucleic Acids Res. 2012 Jul;40(12):5602-14. doi: 10.1093/nar/gks182. Epub 2012 Feb 28.

13.

Archaeal translation initiation factor aIF2 can substitute for eukaryotic eIF2 in ribosomal scanning during mammalian 48S complex formation.

Dmitriev SE, Stolboushkina EA, Terenin IM, Andreev DE, Garber MB, Shatsky IN.

J Mol Biol. 2011 Oct 14;413(1):106-14. doi: 10.1016/j.jmb.2011.08.026. Epub 2011 Aug 23.

PMID:
21884705
14.

GTP-independent tRNA delivery to the ribosomal P-site by a novel eukaryotic translation factor.

Dmitriev SE, Terenin IM, Andreev DE, Ivanov PA, Dunaevsky JE, Merrick WC, Shatsky IN.

J Biol Chem. 2010 Aug 27;285(35):26779-87. doi: 10.1074/jbc.M110.119693. Epub 2010 Jun 21.

15.

Differential contribution of the m7G-cap to the 5' end-dependent translation initiation of mammalian mRNAs.

Andreev DE, Dmitriev SE, Terenin IM, Prassolov VS, Merrick WC, Shatsky IN.

Nucleic Acids Res. 2009 Oct;37(18):6135-47. doi: 10.1093/nar/gkp665. Epub 2009 Aug 20.

16.

Differential factor requirement to assemble translation initiation complexes at the alternative start codons of foot-and-mouth disease virus RNA.

Andreev DE, Fernandez-Miragall O, Ramajo J, Dmitriev SE, Terenin IM, Martinez-Salas E, Shatsky IN.

RNA. 2007 Aug;13(8):1366-74. Epub 2007 Jun 25.

17.
18.

A leaderless mRNA can bind to mammalian 80S ribosomes and direct polypeptide synthesis in the absence of translation initiation factors.

Andreev DE, Terenin IM, Dunaevsky YE, Dmitriev SE, Shatsky IN.

Mol Cell Biol. 2006 Apr;26(8):3164-9.

19.

A cross-kingdom internal ribosome entry site reveals a simplified mode of internal ribosome entry.

Terenin IM, Dmitriev SE, Andreev DE, Royall E, Belsham GJ, Roberts LO, Shatsky IN.

Mol Cell Biol. 2005 Sep;25(17):7879-88.

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