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Items: 1 to 20 of 54

1.

Next Generation DNA-Seq and Differential RNA-Seq Allow Re-annotation of the Pyrococcus furiosus DSM 3638 Genome and Provide Insights Into Archaeal Antisense Transcription.

Grünberger F, Reichelt R, Bunk B, Spröer C, Overmann J, Rachel R, Grohmann D, Hausner W.

Front Microbiol. 2019 Jul 12;10:1603. doi: 10.3389/fmicb.2019.01603. eCollection 2019.

2.

A Single-Molecule View of Archaeal Transcription.

Kramm K, Endesfelder U, Grohmann D.

J Mol Biol. 2019 Jun 15. pii: S0022-2836(19)30371-7. doi: 10.1016/j.jmb.2019.06.009. [Epub ahead of print] Review.

PMID:
31207238
3.

Transcription initiation factor TBP: old friend new questions.

Kramm K, Engel C, Grohmann D.

Biochem Soc Trans. 2019 Feb 28;47(1):411-423. doi: 10.1042/BST20180623. Epub 2019 Feb 1. Review.

PMID:
30710057
4.
5.

Towards structural biology with super-resolution microscopy.

Molle J, Jakob L, Bohlen J, Raab M, Tinnefeld P, Grohmann D.

Nanoscale. 2018 Sep 13;10(35):16416-16424. doi: 10.1039/c8nr03361g.

PMID:
30141803
6.

Displacement of the transcription factor B reader domain during transcription initiation.

Dexl S, Reichelt R, Kraatz K, Schulz S, Grohmann D, Bartlett M, Thomm M.

Nucleic Acids Res. 2018 Nov 2;46(19):10066-10081. doi: 10.1093/nar/gky699.

7.

DNA silencing by prokaryotic Argonaute proteins adds a new layer of defense against invading nucleic acids.

Willkomm S, Makarova KS, Grohmann D.

FEMS Microbiol Rev. 2018 May 1;42(3):376-387. doi: 10.1093/femsre/fuy010. Review.

8.

Site-Specific Labelling of Native Mammalian Proteins for Single-Molecule FRET Measurements.

Gust A, Jakob L, Zeitler DM, Bruckmann A, Kramm K, Willkomm S, Tinnefeld P, Meister G, Grohmann D.

Chembiochem. 2018 Apr 16;19(8):780-783. doi: 10.1002/cbic.201700696. Epub 2018 Mar 6.

PMID:
29394002
9.

Molecular mechanisms of Bdp1 in TFIIIB assembly and RNA polymerase III transcription initiation.

Gouge J, Guthertz N, Kramm K, Dergai O, Abascal-Palacios G, Satia K, Cousin P, Hernandez N, Grohmann D, Vannini A.

Nat Commun. 2017 Jul 25;8(1):130. doi: 10.1038/s41467-017-00126-1.

10.

Same same but different: The evolution of TBP in archaea and their eukaryotic offspring.

Blombach F, Grohmann D.

Transcription. 2017 May 27;8(3):162-168. doi: 10.1080/21541264.2017.1289879. Epub 2017 Feb 8.

11.

Structural and mechanistic insights into an archaeal DNA-guided Argonaute protein.

Willkomm S, Oellig CA, Zander A, Restle T, Keegan R, Grohmann D, Schneider S.

Nat Microbiol. 2017 Mar 20;2:17035. doi: 10.1038/nmicrobiol.2017.35.

PMID:
28319084
12.

Guide-independent DNA cleavage by archaeal Argonaute from Methanocaldococcus jannaschii.

Zander A, Willkomm S, Ofer S, van Wolferen M, Egert L, Buchmeier S, Stöckl S, Tinnefeld P, Schneider S, Klingl A, Albers SV, Werner F, Grohmann D.

Nat Microbiol. 2017 Mar 20;2:17034. doi: 10.1038/nmicrobiol.2017.34.

PMID:
28319081
13.

Structure and Function of RNA Polymerases and the Transcription Machineries.

Griesenbeck J, Tschochner H, Grohmann D.

Subcell Biochem. 2017;83:225-270. doi: 10.1007/978-3-319-46503-6_9. Review.

PMID:
28271479
14.

Orthogonal spin labeling using click chemistry for in vitro and in vivo applications.

Kucher S, Korneev S, Tyagi S, Apfelbaum R, Grohmann D, Lemke EA, Klare JP, Steinhoff HJ, Klose D.

J Magn Reson. 2017 Feb;275:38-45. doi: 10.1016/j.jmr.2016.12.001. Epub 2016 Dec 2.

PMID:
27992783
15.

Site-Specific Fluorescent Labeling of Argonaute for FRET-Based Bio-Assays.

Willkomm S, Zander A, Grohmann D.

Methods Mol Biol. 2017;1517:291-304.

PMID:
27924490
16.

Repression of RNA polymerase by the archaeo-viral regulator ORF145/RIP.

Sheppard C, Blombach F, Belsom A, Schulz S, Daviter T, Smollett K, Mahieu E, Erdmann S, Tinnefeld P, Garrett R, Grohmann D, Rappsilber J, Werner F.

Nat Commun. 2016 Nov 24;7:13595. doi: 10.1038/ncomms13595.

17.

Molecular force spectroscopy with a DNA origami-based nanoscopic force clamp.

Nickels PC, Wünsch B, Holzmeister P, Bae W, Kneer LM, Grohmann D, Tinnefeld P, Liedl T.

Science. 2016 Oct 21;354(6310):305-307.

18.

Mechanistic Insights into Archaeal and Human Argonaute Substrate Binding and Cleavage Properties.

Willkomm S, Zander A, Grohmann D, Restle T.

PLoS One. 2016 Oct 14;11(10):e0164695. doi: 10.1371/journal.pone.0164695. eCollection 2016.

19.

Molecular Mechanisms of Transcription Initiation-Structure, Function, and Evolution of TFE/TFIIE-Like Factors and Open Complex Formation.

Blombach F, Smollett KL, Grohmann D, Werner F.

J Mol Biol. 2016 Jun 19;428(12):2592-2606. doi: 10.1016/j.jmb.2016.04.016. Epub 2016 Apr 20. Review.

PMID:
27107643
20.

TFE and Spt4/5 open and close the RNA polymerase clamp during the transcription cycle.

Schulz S, Gietl A, Smollett K, Tinnefeld P, Werner F, Grohmann D.

Proc Natl Acad Sci U S A. 2016 Mar 29;113(13):E1816-25. doi: 10.1073/pnas.1515817113. Epub 2016 Mar 15. Erratum in: Proc Natl Acad Sci U S A. 2016 May 17;113(20):E2871.

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