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Items: 1 to 20 of 165


Exploring the diversity of Poaceae-infecting mastreviruses on Reunion Island using a viral metagenomics-based approach.

Claverie S, Ouattara A, Hoareau M, Filloux D, Varsani A, Roumagnac P, Martin DP, Lett JM, Lefeuvre P.

Sci Rep. 2019 Sep 3;9(1):12716. doi: 10.1038/s41598-019-49134-9.


Evolution and ecology of plant viruses.

Lefeuvre P, Martin DP, Elena SF, Shepherd DN, Roumagnac P, Varsani A.

Nat Rev Microbiol. 2019 Oct;17(10):632-644. doi: 10.1038/s41579-019-0232-3. Epub 2019 Jul 16. Review.


Partner HIV Serostatus Impacts Viral Load, Genital HIV Shedding, and Immune Activation in HIV-Infected Individuals.

Jaumdally SZ, Liebenberg LJP, Gumbi PP, Little F, Jaspan HB, Gamieldien H, Tiemessen CT, Coetzee D, Martin DP, Williamson C, Williamson AL, Passmore JS.

J Acquir Immune Defic Syndr. 2019 Sep 1;82(1):51-60. doi: 10.1097/QAI.0000000000002089.


Evolutionary dynamics of ten novel Gamma-PVs: insights from phylogenetic incongruence, recombination and phylodynamic analyses.

Murahwa AT, Nindo F, Onywera H, Meiring TL, Martin DP, Williamson AL.

BMC Genomics. 2019 May 14;20(1):368. doi: 10.1186/s12864-019-5735-9.


Evidence for both Intermittent and Persistent Compartmentalization of HIV-1 in the Female Genital Tract.

Mabvakure BM, Lambson BE, Ramdayal K, Masson L, Kitchin D, Allam M, Abdool Karim S, Williamson C, Passmore JA, Martin DP, Scheepers C, Moore PL, Harkins GW, Morris L.

J Virol. 2019 May 1;93(10). pii: e00311-19. doi: 10.1128/JVI.00311-19. Print 2019 May 15.


Nanopore-based detection and characterization of yam viruses.

Filloux D, Fernandez E, Loire E, Claude L, Galzi S, Candresse T, Winter S, Jeeva ML, Makeshkumar T, Martin DP, Roumagnac P.

Sci Rep. 2018 Dec 14;8(1):17879. doi: 10.1038/s41598-018-36042-7.


Pervasive tertiary structure in the dengue virus RNA genome.

Dethoff EA, Boerneke MA, Gokhale NS, Muhire BM, Martin DP, Sacco MT, McFadden MJ, Weinstein JB, Messer WB, Horner SM, Weeks KM.

Proc Natl Acad Sci U S A. 2018 Nov 6;115(45):11513-11518. doi: 10.1073/pnas.1716689115. Epub 2018 Oct 19.


The Westward Journey of Alfalfa Leaf Curl Virus.

Davoodi Z, Bejerman N, Richet C, Filloux D, Kumari SG, Chatzivassiliou EK, Galzi S, Julian C, Samarfard S, Trucco V, Giolitti F, Fiallo-Olivé E, Navas-Castillo J, Asaad N, Moukahel AR, Hijazi J, Mghandef S, Heydarnejad J, Massumi H, Varsani A, Dietzgen RG, Harkins GW, Martin DP, Roumagnac P.

Viruses. 2018 Oct 4;10(10). pii: E542. doi: 10.3390/v10100542.


Novel circular DNA viruses associated with Apiaceae and Poaceae from South Africa and New Zealand.

Richet C, Kraberger S, Filloux D, Bernardo P, Harkins GW, Martin DP, Roumagnac P, Varsani A.

Arch Virol. 2019 Jan;164(1):237-242. doi: 10.1007/s00705-018-4031-3. Epub 2018 Sep 15.


World Management of Geminiviruses.

Rojas MR, Macedo MA, Maliano MR, Soto-Aguilar M, Souza JO, Briddon RW, Kenyon L, Rivera Bustamante RF, Zerbini FM, Adkins S, Legg JP, Kvarnheden A, Wintermantel WM, Sudarshana MR, Peterschmitt M, Lapidot M, Martin DP, Moriones E, Inoue-Nagata AK, Gilbertson RL.

Annu Rev Phytopathol. 2018 Aug 25;56:637-677. doi: 10.1146/annurev-phyto-080615-100327. Review.


New Isolates of Sweet potato feathery mottle virus and Sweet potato virus C: Biological and Molecular Properties, and Recombination Analysis Based on Complete Genomes.

Maina S, Barbetti MJ, Martin DP, Edwards OR, Jones RAC.

Plant Dis. 2018 Oct;102(10):1899-1914. doi: 10.1094/PDIS-12-17-1972-RE. Epub 2018 Aug 23.


Patterns of genomic site inheritance in HIV-1M inter-subtype recombinants delineate the most likely genomic sites of subtype-specific adaptation.

Tongo M, de Oliveira T, Martin DP.

Virus Evol. 2018 Jun 11;4(1):vey015. doi: 10.1093/ve/vey015. eCollection 2018 Jan.


From Spatial Metagenomics to Molecular Characterization of Plant Viruses: A Geminivirus Case Study.

Claverie S, Bernardo P, Kraberger S, Hartnady P, Lefeuvre P, Lett JM, Galzi S, Filloux D, Harkins GW, Varsani A, Martin DP, Roumagnac P.

Adv Virus Res. 2018;101:55-83. doi: 10.1016/bs.aivir.2018.02.003. Epub 2018 May 7. Review.


Alphasatellitidae: a new family with two subfamilies for the classification of geminivirus- and nanovirus-associated alphasatellites.

Briddon RW, Martin DP, Roumagnac P, Navas-Castillo J, Fiallo-Olivé E, Moriones E, Lett JM, Zerbini FM, Varsani A.

Arch Virol. 2018 Sep;163(9):2587-2600. doi: 10.1007/s00705-018-3854-2. Epub 2018 May 9.


Passion Fruit Chlorotic Mottle Virus: Molecular Characterization of a New Divergent Geminivirus in Brazil.

Fontenele RS, Abreu RA, Lamas NS, Alves-Freitas DMT, Vidal AH, Poppiel RR, Melo FL, Lacorte C, Martin DP, Campos MA, Varsani A, Ribeiro SG.

Viruses. 2018 Apr 2;10(4). pii: E169. doi: 10.3390/v10040169.


Recombinant Goose Circoviruses Circulating in Domesticated and Wild Geese in Poland.

Stenzel T, Dziewulska D, Muhire BM, Hartnady P, Kraberger S, Martin DP, Varsani A.

Viruses. 2018 Mar 2;10(3). pii: E107. doi: 10.3390/v10030107.


Unravelling the complicated evolutionary and dissemination history of HIV-1M subtype A lineages.

Tongo M, Harkins GW, Dorfman JR, Billings E, Tovanabutra S, de Oliveira T, Martin DP.

Virus Evol. 2018 Feb 19;4(1):vey003. doi: 10.1093/ve/vey003. eCollection 2018 Jan.


Nanovirus-alphasatellite complex identified in Vicia cracca in the Rhône delta region of France.

Gallet R, Kraberger S, Filloux D, Galzi S, Fontes H, Martin DP, Varsani A, Roumagnac P.

Arch Virol. 2018 Mar;163(3):695-700. doi: 10.1007/s00705-017-3634-4. Epub 2017 Nov 20.


Molecular characterization of faba bean necrotic yellows viruses in Tunisia.

Kraberger S, Kumari SG, Najar A, Stainton D, Martin DP, Varsani A.

Arch Virol. 2018 Mar;163(3):687-694. doi: 10.1007/s00705-017-3651-3. Epub 2017 Nov 17.


Geometagenomics illuminates the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale.

Bernardo P, Charles-Dominique T, Barakat M, Ortet P, Fernandez E, Filloux D, Hartnady P, Rebelo TA, Cousins SR, Mesleard F, Cohez D, Yavercovski N, Varsani A, Harkins GW, Peterschmitt M, Malmstrom CM, Martin DP, Roumagnac P.

ISME J. 2018 Jan;12(1):173-184. doi: 10.1038/ismej.2017.155. Epub 2017 Oct 20.

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