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Items: 1 to 20 of 109


The functional repertoire contained within the native microbiota of the model nematode Caenorhabditis elegans.

Zimmermann J, Obeng N, Yang W, Pees B, Petersen C, Waschina S, Kissoyan KA, Aidley J, Hoeppner MP, Bunk B, Spröer C, Leippe M, Dierking K, Kaleta C, Schulenburg H.

ISME J. 2019 Sep 4. doi: 10.1038/s41396-019-0504-y. [Epub ahead of print]


Genetic Potential of the Biocontrol Agent Pseudomonas brassicacearum (Formerly P. trivialis) 3Re2-7 Unraveled by Genome Sequencing and Mining, Comparative Genomics and Transcriptomics.

Nelkner J, Tejerizo GT, Hassa J, Lin TW, Witte J, Verwaaijen B, Winkler A, Bunk B, Spröer C, Overmann J, Grosch R, Pühler A, Schlüter AA.

Genes (Basel). 2019 Aug 9;10(8). pii: E601. doi: 10.3390/genes10080601.


Next Generation DNA-Seq and Differential RNA-Seq Allow Re-annotation of the Pyrococcus furiosus DSM 3638 Genome and Provide Insights Into Archaeal Antisense Transcription.

Grünberger F, Reichelt R, Bunk B, Spröer C, Overmann J, Rachel R, Grohmann D, Hausner W.

Front Microbiol. 2019 Jul 12;10:1603. doi: 10.3389/fmicb.2019.01603. eCollection 2019.


A novel group of Rhizobium tumorigenes-like agrobacteria associated with crown gall disease of rhododendron and blueberry.

Kuzmanović N, Behrens P, Idczak E, Wagner S, Goetz M, Spröer C, Bunk B, Overmann J, Smalla K.

Phytopathology. 2019 Jul 11. doi: 10.1094/PHYTO-05-19-0167-R. [Epub ahead of print]


Inactivation of farR Causes High Rhodomyrtone Resistance and Increased Pathogenicity in Staphylococcus aureus.

Nguyen MT, Saising J, Tribelli PM, Nega M, Diene SM, François P, Schrenzel J, Spröer C, Bunk B, Ebner P, Hertlein T, Kumari N, Härtner T, Wistuba D, Voravuthikunchai SP, Mäder U, Ohlsen K, Götz F.

Front Microbiol. 2019 May 28;10:1157. doi: 10.3389/fmicb.2019.01157. eCollection 2019.


Comparison of VITEK 2, MALDI-TOF MS, 16S rRNA gene sequencing, and whole-genome sequencing for identification of Roseomonas mucosa.

Rudolph WW, Gunzer F, Trauth M, Bunk B, Bigge R, Schröttner P.

Microb Pathog. 2019 Sep;134:103576. doi: 10.1016/j.micpath.2019.103576. Epub 2019 Jun 8.


Corrigendum: Fuerstia marisgermanicae gen. nov., sp. nov., an Unusual Member of the Phylum Planctomycetes From the German Wadden Sea.

Kohn T, Heuer A, Jogler M, Vollmers J, Boedeker C, Bunk B, Rast P, Borchert D, Glöckner I, Freese HM, Klenk HP, Overmann J, Kaster AK, Rohde M, Wiegand S, Jogler C.

Front Microbiol. 2019 May 15;10:1029. doi: 10.3389/fmicb.2019.01029. eCollection 2019.


Leucobacter muris sp. nov., isolated from the nose of a laboratory mouse.

Benga L, Spröer C, Schumann P, Verbarg S, Bunk B, Engelhardt E, Benten WPM, Sager M.

Int J Syst Evol Microbiol. 2019 Jul;69(7):2095-2100. doi: 10.1099/ijsem.0.003446. Epub 2019 May 17.


Detection of Robinsoniella peoriensis in multiple bone samples of a trauma patient.

Schröttner P, Hartwich K, Bunk B, Schober I, Helbig S, Rudolph WW, Gunzer F.

Anaerobe. 2019 May 7;59:14-18. doi: 10.1016/j.anaerobe.2019.05.001. [Epub ahead of print]


Isolation, characterization and analysis of bacteriophages from the haloalkaline lake Elmenteita, Kenya.

Akhwale JK, Rohde M, Rohde C, Bunk B, Spröer C, Boga HI, Klenk HP, Wittmann J.

PLoS One. 2019 Apr 25;14(4):e0215734. doi: 10.1371/journal.pone.0215734. eCollection 2019.


Comparative Transcriptomic Profiling of Yersinia enterocolitica O:3 and O:8 Reveals Major Expression Differences of Fitness- and Virulence-Relevant Genes Indicating Ecological Separation.

Schmühl C, Beckstette M, Heroven AK, Bunk B, Spröer C, McNally A, Overmann J, Dersch P.

mSystems. 2019 Apr 23;4(2). pii: e00239-18. doi: 10.1128/mSystems.00239-18. eCollection 2019 Mar-Apr.


Genomic and transcriptomic characterization of Pseudomonas aeruginosa small colony variants derived from a chronic infection model.

Irvine S, Bunk B, Bayes HK, Spröer C, Connolly JPR, Six A, Evans TJ, Roe AJ, Overmann J, Walker D.

Microb Genom. 2019 Apr;5(4). doi: 10.1099/mgen.0.000262. Epub 2019 Mar 28.


Complete Genome Sequence of the Silicimonas algicola Type Strain, a Representative of the Marine Roseobacter Group Isolated from the Cell Surface of the Marine Diatom Thalassiosira delicatula.

Crenn K, Bunk B, Spröer C, Overmann J, Jeanthon C.

Microbiol Resour Announc. 2019 Feb 28;8(9). pii: e00108-19. doi: 10.1128/MRA.00108-19. eCollection 2019 Feb.


Comparative genomic analysis of eight novel haloalkaliphilic bacteriophages from Lake Elmenteita, Kenya.

Akhwale JK, Rohde M, Rohde C, Bunk B, Spröer C, Klenk HP, Boga HI, Wittmann J.

PLoS One. 2019 Feb 14;14(2):e0212102. doi: 10.1371/journal.pone.0212102. eCollection 2019.


Cobaviruses - a new globally distributed phage group infecting Rhodobacteraceae in marine ecosystems.

Bischoff V, Bunk B, Meier-Kolthoff JP, Spröer C, Poehlein A, Dogs M, Nguyen M, Petersen J, Daniel R, Overmann J, Göker M, Simon M, Brinkhoff T, Moraru C.

ISME J. 2019 Jun;13(6):1404-1421. doi: 10.1038/s41396-019-0362-7. Epub 2019 Feb 4.


Genomic analysis of three Clostridioides difficile isolates from urban water sources.

Numberger D, Riedel T, McEwen G, Nübel U, Frentrup M, Schober I, Bunk B, Spröer C, Overmann J, Grossart HP, Greenwood AD.

Anaerobe. 2019 Apr;56:22-26. doi: 10.1016/j.anaerobe.2019.01.002. Epub 2019 Jan 8.


Divergent evolution in the genomes of closely related lacertids, Lacerta viridis and L. bilineata, and implications for speciation.

Kolora SRR, Weigert A, Saffari A, Kehr S, Walter Costa MB, Spröer C, Indrischek H, Chintalapati M, Lohse K, Doose G, Overmann J, Bunk B, Bleidorn C, Grimm-Seyfarth A, Henle K, Nowick K, Faria R, Stadler PF, Schlegel M.

Gigascience. 2019 Feb 1;8(2). pii: giy160. doi: 10.1093/gigascience/giy160.


Kyrpidia spormannii sp. nov., a thermophilic, hydrogen-oxidizing, facultative autotroph, isolated from hydrothermal systems at São Miguel Island, and emended description of the genus Kyrpidia.

Reiner JE, Jung T, Lapp CJ, Siedler M, Bunk B, Overmann J, Gescher J.

Int J Syst Evol Microbiol. 2018 Dec;68(12):3735-3740. doi: 10.1099/ijsem.0.003037. Epub 2018 Sep 20.


Comparative Genomics Reveal a Flagellar System, a Type VI Secretion System and Plant Growth-Promoting Gene Clusters Unique to the Endophytic Bacterium Kosakonia radicincitans.

Becker M, Patz S, Becker Y, Berger B, Drungowski M, Bunk B, Overmann J, Spröer C, Reetz J, Tchuisseu Tchakounte GV, Ruppel S.

Front Microbiol. 2018 Aug 30;9:1997. doi: 10.3389/fmicb.2018.01997. eCollection 2018.


Long-read DNA metabarcoding of ribosomal RNA in the analysis of fungi from aquatic environments.

Heeger F, Bourne EC, Baschien C, Yurkov A, Bunk B, Spröer C, Overmann J, Mazzoni CJ, Monaghan MT.

Mol Ecol Resour. 2018 Nov;18(6):1500-1514. doi: 10.1111/1755-0998.12937. Epub 2018 Sep 23.


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