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Items: 9

1.

Genetic Potential of the Biocontrol Agent Pseudomonas brassicacearum (Formerly P. trivialis) 3Re2-7 Unraveled by Genome Sequencing and Mining, Comparative Genomics and Transcriptomics.

Nelkner J, Tejerizo GT, Hassa J, Lin TW, Witte J, Verwaaijen B, Winkler A, Bunk B, Spröer C, Overmann J, Grosch R, Pühler A, Schlüter AA.

Genes (Basel). 2019 Aug 9;10(8). pii: E601. doi: 10.3390/genes10080601.

2.

A comprehensive analysis of the Lactuca sativa, L. transcriptome during different stages of the compatible interaction with Rhizoctonia solani.

Verwaaijen B, Wibberg D, Winkler A, Zrenner R, Bednarz H, Niehaus K, Grosch R, Pühler A, Schlüter A.

Sci Rep. 2019 May 10;9(1):7221. doi: 10.1038/s41598-019-43706-5.

3.

Assembly of the Lactuca sativa, L. cv. Tizian draft genome sequence reveals differences within major resistance complex 1 as compared to the cv. Salinas reference genome.

Verwaaijen B, Wibberg D, Nelkner J, Gordin M, Rupp O, Winkler A, Bremges A, Blom J, Grosch R, Pühler A, Schlüter A.

J Biotechnol. 2018 Feb 10;267:12-18. doi: 10.1016/j.jbiotec.2017.12.021. Epub 2017 Dec 24.

PMID:
29278726
4.

Draft genome sequence of the potato pathogen Rhizoctonia solani AG3-PT isolate Ben3.

Wibberg D, Genzel F, Verwaaijen B, Blom J, Rupp O, Goesmann A, Zrenner R, Grosch R, Pühler A, Schlüter A.

Arch Microbiol. 2017 Sep;199(7):1065-1068. doi: 10.1007/s00203-017-1394-x. Epub 2017 Jun 8.

PMID:
28597196
5.

The Rhizoctonia solani AG1-IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.).

Verwaaijen B, Wibberg D, Kröber M, Winkler A, Zrenner R, Bednarz H, Niehaus K, Grosch R, Pühler A, Schlüter A.

PLoS One. 2017 May 9;12(5):e0177278. doi: 10.1371/journal.pone.0177278. eCollection 2017.

6.

Comparative transcriptome analysis of the biocontrol strain Bacillus amyloliquefaciens FZB42 as response to biofilm formation analyzed by RNA sequencing.

Kröber M, Verwaaijen B, Wibberg D, Winkler A, Pühler A, Schlüter A.

J Biotechnol. 2016 Aug 10;231:212-223. doi: 10.1016/j.jbiotec.2016.06.013. Epub 2016 Jun 14.

PMID:
27312701
7.

Development of a Rhizoctonia solani AG1-IB Specific Gene Model Enables Comparative Genome Analyses between Phytopathogenic R. solani AG1-IA, AG1-IB, AG3 and AG8 Isolates.

Wibberg D, Rupp O, Blom J, Jelonek L, Kröber M, Verwaaijen B, Goesmann A, Albaum S, Grosch R, Pühler A, Schlüter A.

PLoS One. 2015 Dec 21;10(12):e0144769. doi: 10.1371/journal.pone.0144769. eCollection 2015.

8.

Improved genome sequence of the phytopathogenic fungus Rhizoctonia solani AG1-IB 7/3/14 as established by deep mate-pair sequencing on the MiSeq (Illumina) system.

Wibberg D, Rupp O, Jelonek L, Kröber M, Verwaaijen B, Blom J, Winkler A, Goesmann A, Grosch R, Pühler A, Schlüter A.

J Biotechnol. 2015 Jun 10;203:19-21. doi: 10.1016/j.jbiotec.2015.03.005. Epub 2015 Mar 20.

PMID:
25801332
9.

Effect of the strain Bacillus amyloliquefaciens FZB42 on the microbial community in the rhizosphere of lettuce under field conditions analyzed by whole metagenome sequencing.

Kröber M, Wibberg D, Grosch R, Eikmeyer F, Verwaaijen B, Chowdhury SP, Hartmann A, Pühler A, Schlüter A.

Front Microbiol. 2014 May 27;5:252. doi: 10.3389/fmicb.2014.00252. eCollection 2014.

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