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Items: 7

1.

Rock climbing: A local-global algorithm to compute minimum energy and minimum free energy pathways.

Templeton C, Chen SH, Fathizadeh A, Elber R.

J Chem Phys. 2017 Oct 21;147(15):152718. doi: 10.1063/1.4986298.

PMID:
29055297
2.

Calculating Iso-Committor Surfaces as Optimal Reaction Coordinates with Milestoning.

Elber R, Bello-Rivas JM, Ma P, Cardenas AE, Fathizadeh A.

Entropy (Basel). 2017 May;19(5). pii: 219. doi: 10.3390/e19050219. Epub 2017 May 11.

3.

Modeling and Analysis of Intercalant Effects on Circular DNA Conformation.

Krueger E, Shim J, Fathizadeh A, Chang AN, Subei B, Yocham KM, Davis PH, Graugnard E, Khalili-Araghi F, Bashir R, Estrada D, Fologea D.

ACS Nano. 2016 Sep 27;10(9):8910-7. doi: 10.1021/acsnano.6b04876. Epub 2016 Aug 29.

4.

Diffusion and self-assembly of C60 molecules on monolayer graphyne sheets.

Ozmaian M, Fathizadeh A, Jalalvand M, Ejtehadi MR, Allaei SM.

Sci Rep. 2016 Feb 25;6:21910. doi: 10.1038/srep21910.

5.

Bimodal Phonon Scattering in Graphene Grain Boundaries.

Yasaei P, Fathizadeh A, Hantehzadeh R, Majee AK, El-Ghandour A, Estrada D, Foster C, Aksamija Z, Khalili-Araghi F, Salehi-Khojin A.

Nano Lett. 2015 Jul 8;15(7):4532-40. doi: 10.1021/acs.nanolett.5b01100. Epub 2015 Jun 8.

PMID:
26035002
6.

Variation of protein corona composition of gold nanoparticles following plasmonic heating.

Mahmoudi M, Lohse SE, Murphy CJ, Fathizadeh A, Montazeri A, Suslick KS.

Nano Lett. 2014 Jan 8;14(1):6-12. doi: 10.1021/nl403419e. Epub 2013 Dec 12.

PMID:
24328336
7.

Rigid-body molecular dynamics of DNA inside a nucleosome.

Fathizadeh A, Berdy Besya A, Reza Ejtehadi M, Schiessel H.

Eur Phys J E Soft Matter. 2013 Mar;36(3):21. doi: 10.1140/epje/i2013-13021-4. Epub 2013 Mar 13.

PMID:
23475204

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